EX570311

EST Overview
NameEX570311
Unique NameEX570311
TypeEST
OrganismPisum sativum (pea)
Sequence length309
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX570311 vs. TrEMBL
Match: A5C6M5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032482 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.826e-19
Identity = 53/76 (69.74%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH-----XXXXXXXXXXPFDARFSEDAPQ 213
            GSECLVDEATG V GK GQA  T LPPISAVRL+QMSKAVRWLVIELQH               PFDARFSEDA Q
Sbjct:   70 GSECLVDEATGSVAGKPGQAVTTGLPPISAVRLEQMSKAVRWLVIELQHGSGTAGGPSHSHVSAPFDARFSEDAAQ 145          
BLAST of EX570311 vs. TrEMBL
Match: C6SY99_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.128e-18
Identity = 53/77 (68.83%), Postives = 54/77 (70.13%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH------XXXXXXXXXXPFDARFSEDAPQ 213
            GSECLVDEAT  V GK GQATMT LPPISAVRL+QMSKAVRWLVIELQH                 FDARFSEDA Q
Sbjct:   70 GSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGSGAGSANSALTHPSAQFDARFSEDAAQ 146          
BLAST of EX570311 vs. TrEMBL
Match: B9H0P1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_712927 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.086e-18
Identity = 51/77 (66.23%), Postives = 55/77 (71.43%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH------XXXXXXXXXXPFDARFSEDAPQ 213
            GSECLVDEATG V G++GQ  +T LPPISAVRL+QMSKAVRWLVIELQH                PFDARFSEDA Q
Sbjct:   70 GSECLVDEATGSVSGRSGQGGVTGLPPISAVRLEQMSKAVRWLVIELQHGSGAAGGAAGHAHPSAPFDARFSEDAAQ 146          
BLAST of EX570311 vs. TrEMBL
Match: B9RZB0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0937380 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.607e-14
Identity = 48/76 (63.16%), Postives = 51/76 (67.11%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH-----XXXXXXXXXXPFDARFSEDAPQ 213
            GSECLVDEATG + GK+     T LPPISAVRL+QMSKAVRWLVIELQ                PFDARFSEDA Q
Sbjct:   45 GSECLVDEATGSMTGKS----TTGLPPISAVRLEQMSKAVRWLVIELQQGSGAASGFGHAHPSAPFDARFSEDATQ 116          
BLAST of EX570311 vs. TrEMBL
Match: Q84VW5_ARATH (At1g11760 OS=Arabidopsis thaliana GN=At1g11763 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.172e-11
Identity = 43/82 (52.44%), Postives = 49/82 (59.76%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAG-------QATMTTLPPISAVRLDQMSKAVRWLVIELQHXXXXXXXXXXP----FDARFSEDAPQ 213
            GSECLVDEATG     AG           T+LPPISAVRL+QMS+AVRWLV+ELQ                FD+RFSED+ Q
Sbjct:   70 GSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLVLELQRGSGVAPGSVHSSSTGFDSRFSEDSTQ 151          
BLAST of EX570311 vs. TrEMBL
Match: C5YUN2_SORBI (Putative uncharacterized protein Sb09g006450 OS=Sorghum bicolor GN=Sb09g006450 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.401e-10
Identity = 36/49 (73.47%), Postives = 38/49 (77.55%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH 147
            GSECLVDEATG     AG A    + PISAVRL+QMSKAVRWLVIELQH
Sbjct:   71 GSECLVDEATGSA--SAGSAAAPGIKPISAVRLEQMSKAVRWLVIELQH 117          
BLAST of EX570311 vs. TrEMBL
Match: B6T4I1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.986e-10
Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH 147
            GSECLVDEATG     AG      + PISAVRL+QMSKAVRWLVIELQH
Sbjct:   71 GSECLVDEATGSA--SAGSVAAPGIKPISAVRLEQMSKAVRWLVIELQH 117          
BLAST of EX570311 vs. TrEMBL
Match: Q94LU4_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0082M15.27 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.556e-9
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH 147
            GSECLVDEATG     +       + PISAVRL+QMSKAVRWLVIELQH
Sbjct:   70 GSECLVDEATGASSSSSAALAAPGIKPISAVRLEQMSKAVRWLVIELQH 118          
BLAST of EX570311 vs. TrEMBL
Match: Q0IVX4_ORYSJ (Os10g0548400 protein OS=Oryza sativa subsp. japonica GN=Os10g0548400 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.556e-9
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH 147
            GSECLVDEATG     +       + PISAVRL+QMSKAVRWLVIELQH
Sbjct:   70 GSECLVDEATGASSSSSAALAAPGIKPISAVRLEQMSKAVRWLVIELQH 118          
BLAST of EX570311 vs. TrEMBL
Match: B6U8G3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.556e-9
Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAGQATMTTLPPISAVRLDQMSKAVRWLVIELQH 147
            GSECLVDEAT  V   AG      + PISAVRL+QMSKAVRWLVIELQH
Sbjct:   71 GSECLVDEAT--VSASAGSVAAPGIKPISAVRLEQMSKAVRWLVIELQH 117          
BLAST of EX570311 vs. TAIR peptide
Match: AT1G11760.1 (| Symbols: MED32 | MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:3972356-3972811 REVERSE LENGTH=151)

HSP 1 Score: 72.0182 bits (175), Expect = 8.294e-14
Identity = 43/82 (52.44%), Postives = 49/82 (59.76%), Query Frame = 1
Query:    1 GSECLVDEATGHVVGKAG-------QATMTTLPPISAVRLDQMSKAVRWLVIELQHXXXXXXXXXXP----FDARFSEDAPQ 213
            GSECLVDEATG     AG           T+LPPISAVRL+QMS+AVRWLV+ELQ                FD+RFSED+ Q
Sbjct:   70 GSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLVLELQRGSGVAPGSVHSSSTGFDSRFSEDSTQ 151          
The following BLAST results are available for this feature:
BLAST of EX570311 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5C6M5_VITVI4.826e-1969.74Putative uncharacterized protein OS=Vitis vinifera... [more]
C6SY99_SOYBN3.128e-1868.83Putative uncharacterized protein OS=Glycine max PE... [more]
B9H0P1_POPTR4.086e-1866.23Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RZB0_RICCO1.607e-1463.16Putative uncharacterized protein OS=Ricinus commun... [more]
Q84VW5_ARATH2.172e-1152.44At1g11760 OS=Arabidopsis thaliana GN=At1g11763 PE=... [more]
C5YUN2_SORBI2.401e-1073.47Putative uncharacterized protein Sb09g006450 OS=So... [more]
B6T4I1_MAIZE6.986e-1071.43Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q94LU4_ORYSJ1.556e-967.35Expressed protein OS=Oryza sativa subsp. japonica ... [more]
Q0IVX4_ORYSJ1.556e-967.35Os10g0548400 protein OS=Oryza sativa subsp. japoni... [more]
B6U8G3_MAIZE1.556e-971.43Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
back to top
BLAST of EX570311 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G11760.18.294e-1452.44| Symbols: MED32 | MED32; Has 41 Blast hits to 40 ... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21528UNCHARACTERIZEDcoord: 1..68
score: 1.4
NoneNo IPR availableSEGsegsegcoord: 50..59
score
NoneNo IPR availableSEGsegsegcoord: 34..43
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570311 ID=EX570311; Name=EX570311; organism=Pisum sativum; type=EST; length=309bp
GGATCAGAGTGTTTAGTGGACGAGGCTACCGGGCATGTGGTAGGAAAGGC
TGGACAAGCTACCATGACTACTCTCCCACCAATCAGTGCGGTTCGCTTGG
ATCAGATGAGTAAAGCGGTCCGTTGGCTTGTGATTGAATTGCAGCATGGC
TCTGGAGCCGGTTCTTCTAGTTCAGCCCCTTTTGATGCCAGGTTTTCTGA
AGATGCTCCTCAGTAGCATTTTTTTTAATTTAATGTTTTTAATATGTCTT
GCTTTTTCCGATGTAGTTGTTTCCTACGCAGTAAGTAGGTGTATTTTAAA
GTATGTAAC
back to top