GT619676

EST Overview
NameGT619676
Unique NameGT619676
TypeEST
OrganismLens culinaris (lentil)
Sequence length550
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT619676 vs. TrEMBL
Match: A5C4U7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007595 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.653e-27
Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 3
Query:    3 GFQAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIYGSDR-ITEVKPLQDMLLAEPELTRLGR 224
            G Q PGTFILRFPTSRSWPHPDAGSL VTY+GSDY LHHR+LS+D+IY SD  +  +KPL+DMLLAEPEL+RLGR
Sbjct:  636 GLQQPGTFILRFPTSRSWPHPDAGSLIVTYIGSDYNLHHRMLSLDNIYSSDETVRNMKPLEDMLLAEPELSRLGR 710          
BLAST of GT619676 vs. TrEMBL
Match: D7MJN2_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494048 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.547e-25
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIY-GSDRITEVKPLQDMLLAEPELTRLGRVI 230
            Q  GTFILRFPTSRSWPHPDAGSL VTYVG D  +HHRLL++DHI   S+R T+ KPLQDMLLAEPEL+RLGRVI
Sbjct:  564 QVAGTFILRFPTSRSWPHPDAGSLVVTYVGHDLVIHHRLLTIDHICDSSERYTDAKPLQDMLLAEPELSRLGRVI 638          
BLAST of GT619676 vs. TrEMBL
Match: B5X561_ARATH (At1g17040 OS=Arabidopsis thaliana GN=At1g17040 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.501e-25
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIY-GSDRITEVKPLQDMLLAEPELTRLGRVIR 233
            Q PGTFILRFPTSRSWPHPDAGS+ VTYVG D  +HHRLL+++HI   S+R T+ K LQDMLLAEPEL+RLGR+IR
Sbjct:  564 QVPGTFILRFPTSRSWPHPDAGSVVVTYVGHDLVIHHRLLTINHICDSSERYTDAKQLQDMLLAEPELSRLGRIIR 639          
BLAST of GT619676 vs. TrEMBL
Match: Q56XZ1_ARATH (Putative uncharacterized protein At1g78540 OS=Arabidopsis thaliana GN=At1g78540 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.226e-23
Identity = 53/78 (67.95%), Postives = 63/78 (80.77%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHI-YGSDRITEVKPLQDMLLAEPELTRLGRVIRRY 239
            Q PGTFILRFP SR+WPHPDAGSL VTYVG D+ LHH+ L +D+I   S+R  + KPLQDMLLAEPEL+RLGR+ R +
Sbjct:  591 QEPGTFILRFPISRTWPHPDAGSLVVTYVGHDFALHHKQLKIDNICESSERYMDAKPLQDMLLAEPELSRLGRIKRSH 668          
BLAST of GT619676 vs. TrEMBL
Match: D7KVC1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477018 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.091e-22
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHI-YGSDRITEVKPLQDMLLAEPELTRLGRVIRRY 239
            Q PGTFILRFP SR WPHPDAGSL V+YVG D+ LHH+ L +D++   S+R  + KPLQD+LLAEPEL+RLGR+IR +
Sbjct:  591 QEPGTFILRFPISRIWPHPDAGSLVVSYVGHDFALHHKQLKIDNMCESSERYMDAKPLQDVLLAEPELSRLGRIIRSH 668          
BLAST of GT619676 vs. TrEMBL
Match: C5WWY3_SORBI (Putative uncharacterized protein Sb01g046380 OS=Sorghum bicolor GN=Sb01g046380 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.690e-19
Identity = 49/73 (67.12%), Postives = 57/73 (78.08%), Query Frame = 3
Query:   15 PGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIYGSDRITEVKPLQDMLLAEPELTRLGRVIR 233
            PGTF+LRFPT+RSWPHPDAG L VTY+GSD  +HHRLLS+D    SD   E   LQD+LL EPEL++LGRV R
Sbjct:  309 PGTFVLRFPTTRSWPHPDAGCLVVTYIGSDNSIHHRLLSLD---SSDASAE--NLQDLLLQEPELSQLGRVDR 376          
BLAST of GT619676 vs. TrEMBL
Match: Q336Q9_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g41770 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.820e-19
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 3
Query:   15 PGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIYGSDRITEVKP--LQDMLLAEPELTRLGRVIR 233
            PGTF+LRFPT+RSWPHPDAGSL VTYVGSD  +HHRLLS+D       +++ K   L+D+LL EPEL++LGRV R
Sbjct:  502 PGTFVLRFPTTRSWPHPDAGSLVVTYVGSDNSIHHRLLSLD-------VSDAKSGNLEDLLLKEPELSQLGRVDR 569          
BLAST of GT619676 vs. TrEMBL
Match: Q0IVJ6_ORYSJ (Os10g0567300 protein OS=Oryza sativa subsp. japonica GN=Os10g0567300 PE=4 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.820e-19
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 3
Query:   15 PGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIYGSDRITEVKP--LQDMLLAEPELTRLGRVIR 233
            PGTF+LRFPT+RSWPHPDAGSL VTYVGSD  +HHRLLS+D       +++ K   L+D+LL EPEL++LGRV R
Sbjct:  275 PGTFVLRFPTTRSWPHPDAGSLVVTYVGSDNSIHHRLLSLD-------VSDAKSGNLEDLLLKEPELSQLGRVDR 342          
BLAST of GT619676 vs. TrEMBL
Match: B9G731_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_32508 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.820e-19
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 3
Query:   15 PGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIYGSDRITEVKP--LQDMLLAEPELTRLGRVIR 233
            PGTF+LRFPT+RSWPHPDAGSL VTYVGSD  +HHRLLS+D       +++ K   L+D+LL EPEL++LGRV R
Sbjct:  627 PGTFVLRFPTTRSWPHPDAGSLVVTYVGSDNSIHHRLLSLD-------VSDAKSGNLEDLLLKEPELSQLGRVDR 694          
BLAST of GT619676 vs. TrEMBL
Match: B8BIB6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34700 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.820e-19
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 3
Query:   15 PGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIYGSDRITEVKP--LQDMLLAEPELTRLGRVIR 233
            PGTF+LRFPT+RSWPHPDAGSL VTYVGSD  +HHRLLS+D       +++ K   L+D+LL EPEL++LGRV R
Sbjct:  627 PGTFVLRFPTTRSWPHPDAGSLVVTYVGSDNSIHHRLLSLD-------VSDAKSGNLEDLLLKEPELSQLGRVDR 694          
BLAST of GT619676 vs. TAIR peptide
Match: AT1G17040.2 (| Symbols: SHA | SH2 domain protein A | chr1:5825109-5828056 FORWARD LENGTH=651)

HSP 1 Score: 117.857 bits (294), Expect = 3.625e-27
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIY-GSDRITEVKPLQDMLLAEPELTRLGRVIR 233
            Q PGTFILRFPTSRSWPHPDAGS+ VTYVG D  +HHRLL+++HI   S+R T+ K LQDMLLAEPEL+RLGR+IR
Sbjct:  574 QVPGTFILRFPTSRSWPHPDAGSVVVTYVGHDLVIHHRLLTINHICDSSERYTDAKQLQDMLLAEPELSRLGRIIR 649          
BLAST of GT619676 vs. TAIR peptide
Match: AT1G17040.1 (| Symbols: SHA, ATSHA, STATLA | SH2 domain protein A | chr1:5825109-5828056 FORWARD LENGTH=641)

HSP 1 Score: 117.857 bits (294), Expect = 3.625e-27
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHIY-GSDRITEVKPLQDMLLAEPELTRLGRVIR 233
            Q PGTFILRFPTSRSWPHPDAGS+ VTYVG D  +HHRLL+++HI   S+R T+ K LQDMLLAEPEL+RLGR+IR
Sbjct:  564 QVPGTFILRFPTSRSWPHPDAGSVVVTYVGHDLVIHHRLLTINHICDSSERYTDAKQLQDMLLAEPELSRLGRIIR 639          
BLAST of GT619676 vs. TAIR peptide
Match: AT1G78540.1 (| Symbols: SHB, ATSHB, STATLB | SH2 domain protein B | chr1:29541244-29544574 REVERSE LENGTH=668)

HSP 1 Score: 111.694 bits (278), Expect = 2.598e-25
Identity = 53/78 (67.95%), Postives = 63/78 (80.77%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHI-YGSDRITEVKPLQDMLLAEPELTRLGRVIRRY 239
            Q PGTFILRFP SR+WPHPDAGSL VTYVG D+ LHH+ L +D+I   S+R  + KPLQDMLLAEPEL+RLGR+ R +
Sbjct:  591 QEPGTFILRFPISRTWPHPDAGSLVVTYVGHDFALHHKQLKIDNICESSERYMDAKPLQDMLLAEPELSRLGRIKRSH 668          
BLAST of GT619676 vs. TAIR peptide
Match: AT1G78540.2 (| Symbols: SHB | SH2 domain protein B | chr1:29541195-29544574 REVERSE LENGTH=696)

HSP 1 Score: 109.383 bits (272), Expect = 1.289e-24
Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 3
Query:    9 QAPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLHHRLLSMDHI-YGSDRITEVKPLQDMLLAEPELTRLGR 224
            Q PGTFILRFP SR+WPHPDAGSL VTYVG D+ LHH+ L +D+I   S+R  + KPLQDMLLAEPEL+RLGR
Sbjct:  591 QEPGTFILRFPISRTWPHPDAGSLVVTYVGHDFALHHKQLKIDNICESSERYMDAKPLQDMLLAEPELSRLGR 663          
The following BLAST results are available for this feature:
BLAST of GT619676 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5C4U7_VITVI1.653e-2777.33Putative uncharacterized protein OS=Vitis vinifera... [more]
D7MJN2_ARALY1.547e-2577.33Putative uncharacterized protein (Fragment) OS=Ara... [more]
B5X561_ARATH4.501e-2573.68At1g17040 OS=Arabidopsis thaliana GN=At1g17040 PE=... [more]
Q56XZ1_ARATH3.226e-2367.95Putative uncharacterized protein At1g78540 OS=Arab... [more]
D7KVC1_ARALY2.091e-2265.38Putative uncharacterized protein OS=Arabidopsis ly... [more]
C5WWY3_SORBI3.690e-1967.12Putative uncharacterized protein Sb01g046380 OS=So... [more]
Q336Q9_ORYSJ4.820e-1964.00Expressed protein OS=Oryza sativa subsp. japonica ... [more]
Q0IVJ6_ORYSJ4.820e-1964.00Os10g0567300 protein OS=Oryza sativa subsp. japoni... [more]
B9G731_ORYSJ4.820e-1964.00Putative uncharacterized protein OS=Oryza sativa s... [more]
B8BIB6_ORYSI4.820e-1964.00Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT619676 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G17040.23.625e-2773.68| Symbols: SHA | SH2 domain protein A | chr1:58251... [more]
AT1G17040.13.625e-2773.68| Symbols: SHA, ATSHA, STATLA | SH2 domain protein... [more]
AT1G78540.12.598e-2567.95| Symbols: SHB, ATSHB, STATLB | SH2 domain protein... [more]
AT1G78540.21.289e-2471.23| Symbols: SHB | SH2 domain protein B | chr1:29541... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT619676 ID=GT619676; Name=GT619676; organism=Lens culinaris; type=EST; length=550bp
GCGGATTTCAAGCACCTGGTACTTTTATATTACGGTTCCCAACCTCAAGA
AGCTGGCCCCACCCAGATGCTGGTAGCCTAACGGTTACTTATGTTGGCAG
TGACTACAAACTTCACCACAGGCTACTCTCAATGGATCATATTTATGGCT
CTGACAGAATAACTGAGGTGAAACCATTGCAAGATATGCTACTAGCAGAA
CCTGAGCTGACTCGGTTGGGGAGGGTAATAAGAAGGTATCAAGCACACTG
ATGTTGGGGCTGATTGTCCTTAAATATCAAGTCAAAGTTGTTTTTCAAGG
TTGTATTGGCATTATTGTGACTCAAAAAGAGGGATGTGGTCTAGGTTGAG
GATGAATTATGATGGTTTATTTTTCATTTATTTGTCCCCCGTCACACAAT
AGTTGTAACATTTGCTTATTTTAAGAAATTAACTTTATTAATATTATCAT
AAATGTAAATTAAAATAAATATTAATTTAAAAGTGCATATAATATTAATT
AAGGATGCAATTGTAAAATTTTAATTAATATTACATTGAAAATTGAAAGG
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