GT620092

EST Overview


Name	GT620092
Unique Name	GT620092
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	378

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT620092 vs. TrEMBL
Match: B7FH91_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.929e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD
Sbjct:   89 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: A5C1K6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001237 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.615e-35
Identity = 73/78 (93.59%), Postives = 77/78 (98.72%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIAKIM+PRSMAK+L+G+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEIPQD
Sbjct:   89 PERDRKKTKNIKHNGNISLDDVIEIAKIMRPRSMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPQD 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: D7TM93_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016274001 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.698e-35
Identity = 70/78 (89.74%), Postives = 77/78 (98.72%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIA++M+PRSMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P+D
Sbjct:   86 PERDRKKTKNIKHNGNISLDDVIEIARVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEVPED 163

[Close]

BLAST of GT620092 vs. TrEMBL
Match: A5C9G0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019658 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.698e-35
Identity = 70/78 (89.74%), Postives = 77/78 (98.72%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIA++M+PRSMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P+D
Sbjct:   89 PERDRKKTKNIKHNGNISLDDVIEIARVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEVPED 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: B9SWB0_RICCO (60S ribosomal protein L12, putative OS=Ricinus communis GN=RCOM_0153900 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.135e-35
Identity = 71/78 (91.03%), Postives = 76/78 (97.44%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKH+GNISLDDVIEIAK+MKPRSMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P D
Sbjct:   89 PERDRKKTKNIKHSGNISLDDVIEIAKVMKPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: Q6RJY1_CAPAN (60S ribosomal protein L12 OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.013e-35
Identity = 71/78 (91.03%), Postives = 77/78 (98.72%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIAK+M+PRSMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEIP++
Sbjct:   89 PERDRKKTKNIKHNGNISLDDVIEIAKVMQPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPEN 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: C6T5N1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.331e-34
Identity = 68/78 (87.18%), Postives = 77/78 (98.72%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIA++M+PRSMAK+L+G++KEILGTCVSVGCTVDGKDPKDLQQEI+DGDVE+P D
Sbjct:   89 PERDRKKTKNIKHNGNISLDDVIEIARVMRPRSMAKDLSGSIKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEVPLD 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: C6TMB5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.045e-34
Identity = 68/78 (87.18%), Postives = 76/78 (97.44%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIA++M+PRSMAK+L+G++KEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P D
Sbjct:   89 PERDRKKTKNIKHNGNISLDDVIEIARVMRPRSMAKDLSGSIKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: Q308B0_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.977e-34
Identity = 69/78 (88.46%), Postives = 77/78 (98.72%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKHNGNISLDDVIEIAK+M+ RSMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQE++DGDVEIP++
Sbjct:   89 PERDRKKTKNIKHNGNISLDDVIEIAKVMQSRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEVSDGDVEIPEN 166

[Close]

BLAST of GT620092 vs. TrEMBL
Match: B9S0L8_RICCO (60S ribosomal protein L12, putative OS=Ricinus communis GN=RCOM_1356040 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.859e-34
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKH+GNISLD+VIEIAK+MKPRSMAK+L+GTVKEILGTCVSVGCTVD KDPKDLQQEI DGDVEIP D
Sbjct:   89 PERDRKKTKNIKHSGNISLDNVIEIAKVMKPRSMAKDLSGTVKEILGTCVSVGCTVDSKDPKDLQQEITDGDVEIPLD 166

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL123_ARATH (60S ribosomal protein L12-3 OS=Arabidopsis thaliana GN=RPL12C PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.647e-34
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKK KNIKHNGNIS DDVIEIAKIM+PRS+AKEL+GTVKEILGTCVSVGCTVDGKDPKDLQ+EIN GD++IP +
Sbjct:   89 PERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL12_PRUAR (60S ribosomal protein L12 OS=Prunus armeniaca GN=RPL12 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.151e-34
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKKTKNIKH+G+ISLDDVIEIAKIMK RSMAKELAGTVKEIL TCVSVGCTVDGKDPKDLQQEI DGDVEIP D
Sbjct:   89 PERDRKKTKNIKHSGHISLDDVIEIAKIMKHRSMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL121_ARATH (60S ribosomal protein L12-1 OS=Arabidopsis thaliana GN=RPL12A PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.821e-33
Identity = 65/78 (83.33%), Postives = 74/78 (94.87%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKK KNIKHNGNIS DDV EIA+IM+PRS+AKEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DG+VEIP++
Sbjct:   89 PERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPEN 166

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL122_ARATH (60S ribosomal protein L12-2 OS=Arabidopsis thaliana GN=RPL12B PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.057e-33
Identity = 64/78 (82.05%), Postives = 74/78 (94.87%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKK KNIKHNGNIS DDV EIA+IM+PRS+AKEL+GTV+EILGTCVSVGCTVDGKDPKDLQQEI +G++EIP++
Sbjct:   89 PERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPEN 166

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL12_SCHPO (60S ribosomal protein L12 OS=Schizosaccharomyces pombe GN=rpl1201 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.678e-26
Identity = 51/78 (65.38%), Postives = 70/78 (89.74%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            P RDRKK KN+ H+GN+SLD++IE+A+ M+ +S+AKEL+GTVKEILGT  SVGCTVDGK+P D+Q+EI++G++EIPQ+
Sbjct:   88 PARDRKKDKNVAHSGNVSLDEIIEVARTMRFKSLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL12_CAEEL (60S ribosomal protein L12 OS=Caenorhabditis elegans GN=rpl-12 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.872e-24
Identity = 48/76 (63.16%), Postives = 65/76 (85.53%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 242
            P RDRKK KN+KHNG++++D +I+IA+IM+PRSMAK+L GTVKEILGT  SVGCT+DG+ P D+ + I +G++EIP
Sbjct:   88 PPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIP 163

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL12_CAEBR (60S ribosomal protein L12 OS=Caenorhabditis briggsae GN=rpl-12 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.872e-24
Identity = 48/76 (63.16%), Postives = 65/76 (85.53%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 242
            P RDRKK KN+KHNG++++D +I+IA+IM+PRSMAK+L GTVKEILGT  SVGCT+DG+ P D+ + I +G++EIP
Sbjct:   88 PPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIP 163

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL12_CHLRE (60S ribosomal protein L12 (Fragment) OS=Chlamydomonas reinhardtii GN=RPL12 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.308e-23
Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 242
            P RDRKK KNIKH G++++ D+IEIA++M+PRS AK+LA   KEILGT VSVGC VDGKDP+D+   I+DG +EIP
Sbjct:   80 PARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIP 155

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL12_RAT (60S ribosomal protein L12 OS=Rattus norvegicus GN=Rpl12 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.467e-22
Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 242
            P RDRKK KNIKHNGNI+ D+++ IA+ M+ RS+A+EL+GT+KEILGT  SVGC VDG+ P D+  +IN G VE P
Sbjct:   88 PPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163

[Close]

BLAST of GT620092 vs. SwissProt
Match: RL12_MOUSE (60S ribosomal protein L12 OS=Mus musculus GN=Rpl12 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.374e-22
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 242
            P RDRKK KNIKH+GNI+ D+++ IA+ M+ RS+A+EL+GT+KEILGT  SVGC VDG+ P D+  +IN G VE P
Sbjct:   88 PPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163

[Close]

BLAST of GT620092 vs. TAIR peptide
Match: AT5G60670.1 (| Symbols: | Ribosomal protein L11 family protein | chr5:24381066-24381566 REVERSE LENGTH=166)

HSP 1 Score: 144.436 bits (363), Expect = 1.550e-35
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKK KNIKHNGNIS DDVIEIAKIM+PRS+AKEL+GTVKEILGTCVSVGCTVDGKDPKDLQ+EIN GD++IP +
Sbjct:   89 PERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

[Close]

BLAST of GT620092 vs. TAIR peptide
Match: AT2G37190.1 (| Symbols: | Ribosomal protein L11 family protein | chr2:15619559-15620059 REVERSE LENGTH=166)

HSP 1 Score: 140.969 bits (354), Expect = 1.713e-34
Identity = 65/78 (83.33%), Postives = 74/78 (94.87%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKK KNIKHNGNIS DDV EIA+IM+PRS+AKEL+GTV+EILGTCVSVGCTVDGKDPKD+QQEI DG+VEIP++
Sbjct:   89 PERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPEN 166

[Close]

BLAST of GT620092 vs. TAIR peptide
Match: AT3G53430.1 (| Symbols: | Ribosomal protein L11 family protein | chr3:19809895-19810395 REVERSE LENGTH=166)

HSP 1 Score: 139.813 bits (351), Expect = 3.817e-34
Identity = 64/78 (82.05%), Postives = 74/78 (94.87%), Query Frame = 3

Query:   15 PERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 248
            PERDRKK KNIKHNGNIS DDV EIA+IM+PRS+AKEL+GTV+EILGTCVSVGCTVDGKDPKDLQQEI +G++EIP++
Sbjct:   89 PERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPEN 166

The following BLAST results are available for this feature:

BLAST of GT620092 vs. TrEMBL
BLAST of GT620092 vs. SwissProt
BLAST of GT620092 vs. TAIR peptide

BLAST of GT620092 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FH91_MEDTR	5.929e-38	100.00	Putative uncharacterized protein OS=Medicago trunc...	[more]
A5C1K6_VITVI	1.615e-35	93.59	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7TM93_VITVI	4.698e-35	89.74	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5C9G0_VITVI	4.698e-35	89.74	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9SWB0_RICCO	6.135e-35	91.03	60S ribosomal protein L12, putative OS=Ricinus com...	[more]
Q6RJY1_CAPAN	8.013e-35	91.03	60S ribosomal protein L12 OS=Capsicum annuum PE=2 ...	[more]
C6T5N1_SOYBN	2.331e-34	87.18	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TMB5_SOYBN	3.045e-34	87.18	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q308B0_SOLTU	3.977e-34	88.46	Putative uncharacterized protein OS=Solanum tubero...	[more]
B9S0L8_RICCO	8.859e-34	89.74	60S ribosomal protein L12, putative OS=Ricinus com...	[more]

BLAST of GT620092 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL123_ARATH	1.647e-34	85.90	60S ribosomal protein L12-3 OS=Arabidopsis thalian...	[more]
RL12_PRUAR	2.151e-34	92.31	60S ribosomal protein L12 OS=Prunus armeniaca GN=R...	[more]
RL121_ARATH	1.821e-33	83.33	60S ribosomal protein L12-1 OS=Arabidopsis thalian...	[more]
RL122_ARATH	4.057e-33	82.05	60S ribosomal protein L12-2 OS=Arabidopsis thalian...	[more]
RL12_SCHPO	3.678e-26	65.38	60S ribosomal protein L12 OS=Schizosaccharomyces p...	[more]
RL12_CAEEL	5.872e-24	63.16	60S ribosomal protein L12 OS=Caenorhabditis elegan...	[more]
RL12_CAEBR	5.872e-24	63.16	60S ribosomal protein L12 OS=Caenorhabditis briggs...	[more]
RL12_CHLRE	1.308e-23	64.47	60S ribosomal protein L12 (Fragment) OS=Chlamydomo...	[more]
RL12_RAT	2.467e-22	61.84	60S ribosomal protein L12 OS=Rattus norvegicus GN=...	[more]
RL12_MOUSE	9.374e-22	60.53	60S ribosomal protein L12 OS=Mus musculus GN=Rpl12...	[more]

BLAST of GT620092 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G60670.1	1.550e-35	85.90	\| Symbols: \| Ribosomal protein L11 family protein...	[more]
AT2G37190.1	1.713e-34	83.33	\| Symbols: \| Ribosomal protein L11 family protein...	[more]
AT3G53430.1	3.817e-34	82.05	\| Symbols: \| Ribosomal protein L11 family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 2..23 score
None	No IPR available	PANTHER	PTHR11661:SF2	60S RIBOSOMAL PROTEIN L12	coord: 5..82 score: 1.1
None	No IPR available	SEG	seg	seg	coord: 46..61 score
IPR000911	Ribosomal protein L11	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 5..82 score: 1.1
IPR020783	Ribosomal protein L11, C-terminal domain	GENE3D	1.10.10.250	no description	coord: 12..60 score: 7.9
IPR020783	Ribosomal protein L11, C-terminal domain	PFAM	PF00298	Ribosomal_L11	coord: 9..60 score: 2.7
IPR020783	Ribosomal protein L11, C-terminal domain	SUPERFAMILY	46906	Ribosomal protein L11, C-terminal domain	coord: 6..61 score: 9.9
IPR020785	Ribosomal protein L11, conserved site	PROSITE	PS00359	RIBOSOMAL_L11	coord: 47..62 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT620092 ID=GT620092; Name=GT620092; organism=Lens culinaris; type=EST; length=378bp
CCCCGGGCTGCAGGCCGGAACGGGACCGGAAGAAGACAAAGAATATCAAG
CATAATGGGAATATTTCTCTTGATGATGTTATTGAGATCGCGAAGATTAT
GAAGCCGAGATCGATGGCGAAGGAGCTTGCTGGTACTGTTAAGGAGATTC
TTGGGACTTGTGTGTCTGTTGGATGTACCGTTGATGGTAAGGACCCGAAG
GATTTGCAGCAGGAGATTAACGATGGAGATGTTGAAATCCCACAGGATTA
AAGGGAAGGTCTATTTTTGTTTTTGTTTTGTAGACTGTTTTTGATGCGTT
AAGATTTTGATATGTTGAAGATTTTGTTTAATGGATTTAGTGTTTCAGTA
ATTGAGATGATTTTGAGATGTTTTATTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000911	Ribosomal_uL11
IPR020783	Ribosomal_uL11_C
IPR020785	Ribosomal_L11_CS

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