GT620153
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620153 vs. TrEMBL
Match: B9HAF6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561913 PE=4 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.735e-20 Identity = 62/109 (56.88%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329 LAQ RI E + DLAIE ++LEAAQLEV+AATSALQKLAEMS++LLNK S+EAD+ I M N + L L+ N +C VK VARLS+LTEQL+ DAG+ + Sbjct: 611 LAQERIGESSVGDLAIEKLKLEAAQLEVEAATSALQKLAEMSRELLNKASLSIEADADI-FMPNGSGPGLVLLEN---NECFKEVKTEVARLSSLTEQLLQDAGITVGA 715
BLAST of GT620153 vs. TrEMBL
Match: B9RP29_RICCO (Ubiquitin-protein ligase BRE1A, putative OS=Ricinus communis GN=RCOM_0923730 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.310e-19 Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISA-----MQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVA 323 LAQ RI EK + +LAIE +QLEAAQLEV+AATSAL KL EMS++LLNK S+ AD+ +QN +D + + N +CL VK GV RLSA+TEQLV +AG+ A Sbjct: 665 LAQERIGEKSIGELAIEKLQLEAAQLEVEAATSALLKLVEMSRELLNKANLSIMADADAETDISMFLQNYSDPGISMFGN---NECLKEVKTGVVRLSAMTEQLVKEAGVAA 773
BLAST of GT620153 vs. TrEMBL
Match: Q9C5L5_ARATH (Putative uncharacterized protein At4g32190 OS=Arabidopsis thaliana GN=At4g32190 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.931e-16 Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329 LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL + S+EAD+ + M + +CL VK V RL +LTE+L+ +AG+VA + Sbjct: 673 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 774
BLAST of GT620153 vs. TrEMBL
Match: Q8H1E5_ARATH (Putative uncharacterized protein At4g32190 OS=Arabidopsis thaliana GN=At4g32190 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.931e-16 Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329 LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL + S+EAD+ + M + +CL VK V RL +LTE+L+ +AG+VA + Sbjct: 673 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 774
BLAST of GT620153 vs. TrEMBL
Match: O49371_ARATH (Putative uncharacterized protein AT4g32190 OS=Arabidopsis thaliana GN=F10M6.170 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.931e-16 Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329 LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL + S+EAD+ + M + +CL VK V RL +LTE+L+ +AG+VA + Sbjct: 654 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 755
BLAST of GT620153 vs. TrEMBL
Match: D7SUV8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035871001 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.528e-16 Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISA-MQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329 LAQ RI EK + DLAIE +QLEAAQLEV+AATSAL KLAEMS +LL+ SV++++ + + N D L + N + VK VARLSA+T+QLV +AG+V A+ Sbjct: 667 LAQERIGEKSVGDLAIEKLQLEAAQLEVEAATSALHKLAEMSCELLHNVSLSVDSETDTAIFLPNGFDPWLSMHEN---NEHFTKVKTEVARLSAITDQLVQEAGVVGAA 773
BLAST of GT620153 vs. TrEMBL
Match: D7MAQ6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913230 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.232e-15 Identity = 53/105 (50.48%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGL 317 LAQ RI EK M +LAIE +QLEAAQLEV+AATSALQ LAEMS +LL + S+EAD M + C+A VK V RL +LTE+L+ +AG+ Sbjct: 675 LAQERIGEKTMGELAIEKLQLEAAQLEVEAATSALQTLAEMSMELLTQADMSIEADPAYIVMPEQG-------YSEGSNGCIAEVKTEVVRLWSLTEKLLENAGM 772
BLAST of GT620153 vs. TrEMBL
Match: B9IKY5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_779052 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.722e-8 Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYIS-AMQNNNDIKLDLITN----INCIDCLAVVK 260 LA+ RI E+ + +LAI+ ++LEA QLEV+AAT QKLAE S++LLNK +EA++ S +M+N +D L L+ N IDC A K Sbjct: 51 LARERIGERSIRNLAIKKLKLEAVQLEVEAATGDPQKLAETSRELLNKASLCIEANADSSTSMKNGSDPDLVLLENNYVSRRLIDCKASEK 141
BLAST of GT620153 vs. TAIR peptide
Match: AT4G32190.1 (| Symbols: | Myosin heavy chain-related protein | chr4:15545052-15547689 FORWARD LENGTH=783) HSP 1 Score: 88.1965 bits (217), Expect = 2.427e-18 Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329 LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL + S+EAD+ + M + +CL VK V RL +LTE+L+ +AG+VA + Sbjct: 673 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 774 The following BLAST results are available for this feature:
BLAST of GT620153 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 8
BLAST of GT620153 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620153 ID=GT620153; Name=GT620153; organism=Lens culinaris; type=EST; length=487bpback to top |