GT620153

EST Overview
NameGT620153
Unique NameGT620153
TypeEST
OrganismLens culinaris (lentil)
Sequence length487
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT620153 vs. TrEMBL
Match: B9HAF6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561913 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.735e-20
Identity = 62/109 (56.88%), Postives = 77/109 (70.64%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329
            LAQ RI E  + DLAIE ++LEAAQLEV+AATSALQKLAEMS++LLNK   S+EAD+ I  M N +   L L+ N    +C   VK  VARLS+LTEQL+ DAG+   +
Sbjct:  611 LAQERIGESSVGDLAIEKLKLEAAQLEVEAATSALQKLAEMSRELLNKASLSIEADADI-FMPNGSGPGLVLLEN---NECFKEVKTEVARLSSLTEQLLQDAGITVGA 715          
BLAST of GT620153 vs. TrEMBL
Match: B9RP29_RICCO (Ubiquitin-protein ligase BRE1A, putative OS=Ricinus communis GN=RCOM_0923730 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.310e-19
Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISA-----MQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVA 323
            LAQ RI EK + +LAIE +QLEAAQLEV+AATSAL KL EMS++LLNK   S+ AD+         +QN +D  + +  N    +CL  VK GV RLSA+TEQLV +AG+ A
Sbjct:  665 LAQERIGEKSIGELAIEKLQLEAAQLEVEAATSALLKLVEMSRELLNKANLSIMADADAETDISMFLQNYSDPGISMFGN---NECLKEVKTGVVRLSAMTEQLVKEAGVAA 773          
BLAST of GT620153 vs. TrEMBL
Match: Q9C5L5_ARATH (Putative uncharacterized protein At4g32190 OS=Arabidopsis thaliana GN=At4g32190 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.931e-16
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329
            LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL +   S+EAD+  + M            +    +CL  VK  V RL +LTE+L+ +AG+VA +
Sbjct:  673 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 774          
BLAST of GT620153 vs. TrEMBL
Match: Q8H1E5_ARATH (Putative uncharacterized protein At4g32190 OS=Arabidopsis thaliana GN=At4g32190 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.931e-16
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329
            LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL +   S+EAD+  + M            +    +CL  VK  V RL +LTE+L+ +AG+VA +
Sbjct:  673 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 774          
BLAST of GT620153 vs. TrEMBL
Match: O49371_ARATH (Putative uncharacterized protein AT4g32190 OS=Arabidopsis thaliana GN=F10M6.170 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.931e-16
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329
            LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL +   S+EAD+  + M            +    +CL  VK  V RL +LTE+L+ +AG+VA +
Sbjct:  654 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 755          
BLAST of GT620153 vs. TrEMBL
Match: D7SUV8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035871001 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.528e-16
Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISA-MQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329
            LAQ RI EK + DLAIE +QLEAAQLEV+AATSAL KLAEMS +LL+    SV++++  +  + N  D  L +  N    +    VK  VARLSA+T+QLV +AG+V A+
Sbjct:  667 LAQERIGEKSVGDLAIEKLQLEAAQLEVEAATSALHKLAEMSCELLHNVSLSVDSETDTAIFLPNGFDPWLSMHEN---NEHFTKVKTEVARLSAITDQLVQEAGVVGAA 773          
BLAST of GT620153 vs. TrEMBL
Match: D7MAQ6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913230 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.232e-15
Identity = 53/105 (50.48%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGL 317
            LAQ RI EK M +LAIE +QLEAAQLEV+AATSALQ LAEMS +LL +   S+EAD     M            +     C+A VK  V RL +LTE+L+ +AG+
Sbjct:  675 LAQERIGEKTMGELAIEKLQLEAAQLEVEAATSALQTLAEMSMELLTQADMSIEADPAYIVMPEQG-------YSEGSNGCIAEVKTEVVRLWSLTEKLLENAGM 772          
BLAST of GT620153 vs. TrEMBL
Match: B9IKY5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_779052 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.722e-8
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYIS-AMQNNNDIKLDLITN----INCIDCLAVVK 260
            LA+ RI E+ + +LAI+ ++LEA QLEV+AAT   QKLAE S++LLNK    +EA++  S +M+N +D  L L+ N       IDC A  K
Sbjct:   51 LARERIGERSIRNLAIKKLKLEAVQLEVEAATGDPQKLAETSRELLNKASLCIEANADSSTSMKNGSDPDLVLLENNYVSRRLIDCKASEK 141          
BLAST of GT620153 vs. TAIR peptide
Match: AT4G32190.1 (| Symbols: | Myosin heavy chain-related protein | chr4:15545052-15547689 FORWARD LENGTH=783)

HSP 1 Score: 88.1965 bits (217), Expect = 2.427e-18
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 3
Query:    3 LAQARIDEKIMDDLAIENVQLEAAQLEVKAATSALQKLAEMSQQLLNKTIPSVEADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVTDAGLVAAS 329
            LAQ R+ EK M DLAIE +QLEAA LEV+AATSALQKLA+MS +LL +   S+EAD+  + M            +    +CL  VK  V RL +LTE+L+ +AG+VA +
Sbjct:  673 LAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERG-------YSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGT 774          
The following BLAST results are available for this feature:
BLAST of GT620153 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9HAF6_POPTR9.735e-2056.88Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RP29_RICCO6.310e-1953.57Ubiquitin-protein ligase BRE1A, putative OS=Ricinu... [more]
Q9C5L5_ARATH2.931e-1649.54Putative uncharacterized protein At4g32190 OS=Arab... [more]
Q8H1E5_ARATH2.931e-1649.54Putative uncharacterized protein At4g32190 OS=Arab... [more]
O49371_ARATH2.931e-1649.54Putative uncharacterized protein AT4g32190 OS=Arab... [more]
D7SUV8_VITVI8.528e-1651.82Whole genome shotgun sequence of line PN40024, sca... [more]
D7MAQ6_ARALY4.232e-1550.48Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9IKY5_POPTR1.722e-846.15Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GT620153 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G32190.12.427e-1849.54| Symbols: | Myosin heavy chain-related protein |... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620153 ID=GT620153; Name=GT620153; organism=Lens culinaris; type=EST; length=487bp
CTTTGGCACAGGCAAGAATCGATGAGAAAATTATGGATGACTTGGCAATC
GAGAATGTTCAGCTTGAGGCGGCTCAGCTTGAAGTTAAAGCTGCTACTAG
TGCTCTGCAGAAACTTGCTGAAATGAGTCAACAACTTTTGAATAAAACCA
TCCCGAGTGTTGAAGCTGATAGCTATATCAGTGCCATGCAAAACAACAAT
GATATTAAACTCGATTTAATCACAAATATCAATTGCATCGACTGTTTAGC
TGTGGTAAAAGCAGGGGTTGCTCGACTCTCGGCATTGACAGAGCAACTTG
TGACGGATGCTGGCCTTGTTGCTGCAAGCTAGAAGATTTGTCAAATGGAC
GTCTCATTGTTTGTGGAAGGACATTGTATACTATTTTTGTGGCTAGAAGC
CATTGCAAGGTTAACCACAAAAAGTAGGTTATAAGATATTCACTTTGTCT
GCAAGATGATTAATGTATAGCAATTGTATCTGTTGTG
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