GT620207
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620207 vs. TrEMBL
Match: Q2HTI6_MEDTR (Alternative oxidase OS=Medicago truncatula GN=MtrDRAFT_AC150441g3v1 PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.895e-70 Identity = 141/177 (79.66%), Postives = 148/177 (83.62%), Query Frame = 3 Query: 138 AAAMISSSLFPTTHLNKPHTSQ----FRPLSFRPSFSRIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXX-AWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 + AM SSSLFP T LNK +S+ FRPLSFRP RIR+SLLQDKEDKVI Q++FPSKT SPLDS T N AWE+GVIKVEQSVNIFLTDSVIKILDALY DRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW Sbjct: 3 STAMFSSSLFPITPLNKLSSSRNSLIFRPLSFRPPLFRIRSSLLQDKEDKVITQNTFPSKT-SPLDSVTENSTNDDDTSSTSAWEKGVIKVEQSVNIFLTDSVIKILDALYRDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 178
BLAST of GT620207 vs. TrEMBL
Match: C6T8G8_SOYBN (Alternative oxidase OS=Glycine max PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 9.428e-62 Identity = 124/171 (72.51%), Postives = 139/171 (81.29%), Query Frame = 3 Query: 141 AAMISSSLFPTTHLNKPHTSQFRPLSFRPSFSRIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 AA+ SSSLF ++ L KP +S + + P R R+ LLQDKE+KVI+QDSFPSKT SPL SA + A+E+ +IKVEQSVNIFLTDSVIKILD LYHDR+YARFFVLETIARVPYFAFMS+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW Sbjct: 2 AAIFSSSLFVSSSLPKPLSSSYSRIHKAPQLFRARSLLLQDKEEKVIVQDSFPSKT-SPLHSADKSTSGNSINTS-AFEKRIIKVEQSVNIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 170
BLAST of GT620207 vs. TrEMBL
Match: Q0H3C8_COFCA (Alternative oxidase OS=Coffea canephora GN=PTOX PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.772e-52 Identity = 106/166 (63.86%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 156 SSLFPTTHLNKPHTSQFRPLSFRPSFSRIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 S L T + HT+ RPLS R SF R++A++LQ+ E KV++++SF SK+ P + GN E+ V+K+EQS+NIFLTDSVIKILD LYHDR+YARFFVLETIARVPYFAFMS+LH+YESFGWWRRAD +VHFAESWNEMHHLLIMEELGGN+W Sbjct: 38 SGLNVVTSPHHRHTATQRPLS-RNSF-RVQATVLQEDEQKVVVEESFQSKSY-PENGGGGNGEPPDASSSSGLEKWVVKIEQSINIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHLYESFGWWRRADLSEVHFAESWNEMHHLLIMEELGGNSW 200
BLAST of GT620207 vs. TrEMBL
Match: Q9FZ04_CAPAN (Alternative oxidase OS=Capsicum annuum GN=PTOX PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.733e-51 Identity = 100/150 (66.67%), Postives = 118/150 (78.67%), Query Frame = 3 Query: 216 SFRPSFSR----IRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 +F+PS SR +RA+LL++ E++V+++ SF K+ N E+ VIK+EQSVNIFLTDSVIKILD LYHDR+YARFFVLETIARVPYFAF+S+LH+YESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW Sbjct: 43 TFQPSLSRKSSRVRATLLKENEEEVVVEKSFAPKSFPGNVGGGNNGEPPDNSSSNGLEKWVIKIEQSVNIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFISVLHLYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 192
BLAST of GT620207 vs. TrEMBL
Match: D7ME58_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492640 PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.179e-50 Identity = 101/156 (64.74%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 207 RPLSFRP----SFSRIRASLLQDKEDKVILQDSFPSKTTS---PLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 RPLS R + R++A++LQD E+KV++++SF ++T + PL+ N A+E +IK+EQ VN+FLTDSVIKILD LY DR YARFFVLETIARVPYFAFMS+LHMYE+FGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W Sbjct: 40 RPLSSRRLLFRNIDRVQATILQDDEEKVVVEESFKAETFTGKEPLEEPNMNSSSSS-----AFESWIIKLEQGVNVFLTDSVIKILDTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 190
BLAST of GT620207 vs. TrEMBL
Match: B9RXE2_RICCO (Alternative oxidase OS=Ricinus communis GN=RCOM_0903090 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.339e-50 Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 3 Query: 237 RIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 R++A++L++ E+KV++ ++F K+ + D G + E+ VIK+EQSVN+FLTDSVIKILDA YHDR+YARFFVLETIARVPYFAFMS+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W Sbjct: 50 RVQATVLRENEEKVVIDETFQPKSFTDDDDGKGGRTGGDPPDT-SLERWVIKLEQSVNVFLTDSVIKILDAFYHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 187
BLAST of GT620207 vs. TrEMBL
Match: Q9FEC9_SOLLC (Alternative oxidase OS=Solanum lycopersicum GN=PTOX PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 8.279e-50 Identity = 96/139 (69.06%), Postives = 111/139 (79.86%), Query Frame = 3 Query: 237 RIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 R+RA+LLQ+ E++V+++ SF K+ N E+ VIK+EQSVNI LTDSVIKILD LYH+RNYARFFVLETIARVPYFAF+S+LHMYESFGWWRRADY+KVHFAESWNEMHHLLIMEELGGNAW Sbjct: 63 RVRATLLQENEEEVVVEKSFAPKSFPDNVGGGSNGKPPDDSSSNGLEKWVIKLEQSVNILLTDSVIKILDTLYHNRNYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYMKVHFAESWNEMHHLLIMEELGGNAW 201
BLAST of GT620207 vs. TrEMBL
Match: D7UE66_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_399.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006689001 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.412e-49 Identity = 107/188 (56.91%), Postives = 130/188 (69.15%), Query Frame = 3 Query: 141 AAMISSSLFPTT----------HL---NKPHTSQFRPLSFRPSFSR----IRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 AA +SS++F + HL + P++ PLS SR ++A++LQ+ E+KV +++SF S + DS + + VIK EQS N+FLT+SVIKILD LYHDR+YARFFVLETIARVPYFAFMS+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW Sbjct: 2 AASLSSAVFVVSVPSLKAKKGRHLGSFSSPNSFHCSPLSSSRFLSRKFHSVQATILQENEEKVTVEESFQSNSFPEDDSKGCSGAPQDSSSSSVLNRWVIKFEQSFNVFLTESVIKILDTLYHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 189
BLAST of GT620207 vs. TrEMBL
Match: B9HZH9_POPTR (Alternative oxidase OS=Populus trichocarpa GN=POPTRDRAFT_1093171 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.478e-48 Identity = 98/148 (66.22%), Postives = 117/148 (79.05%), Query Frame = 3 Query: 219 FRPS--FSRIRASLL-QDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 F PS R++A++L +D+E KV++++SF KT + + G+ W IK+EQSVN+FLTDSVIKILD LYHDR+YARFFVLETIARVPYFAF+S+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W Sbjct: 49 FLPSRKLCRVQATILREDEEKKVVVEESFQPKTFTH-EPVRGSPQSSSPGGLETW---AIKLEQSVNVFLTDSVIKILDTLYHDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 192
BLAST of GT620207 vs. TrEMBL
Match: B9N8H5_POPTR (Alternative oxidase OS=Populus trichocarpa GN=POPTRDRAFT_1117798 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.333e-44 Identity = 89/155 (57.42%), Postives = 116/155 (74.84%), Query Frame = 3 Query: 189 PHTSQFRPLSFRPSFSRIRASLLQDKED-KVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNA 650 P + F P + F R++A++ ++ ED KV++++SF T + G ++ V+K+EQSVN+FLTDSV+ ILDALYH R+YARF+VLETIARVPYFAF+S+LH+YESFGWWRR+DY+KVHFAESWNEMHHLLIMEELGGN+ Sbjct: 44 PTSLPFPPSTRSAKFCRVQATVFKENEDEKVVVEESFRPSTFTH-----GPENSPQPSSPTELDKWVVKLEQSVNVFLTDSVVTILDALYHGRDYARFYVLETIARVPYFAFISVLHLYESFGWWRRSDYIKVHFAESWNEMHHLLIMEELGGNS 193
BLAST of GT620207 vs. SwissProt
Match: AOX4_ARATH (Alternative oxidase 4, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=AOX4 PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 9.705e-51 Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = 3 Query: 237 RIRASLLQDKEDKVILQDSFPSKT---TSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 R++A++LQD E+KV++++SF ++T T PL+ + A+E +IK+EQ VN+FLTDSVIKILD LY DR YARFFVLETIARVPYFAFMS+LHMYE+FGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W Sbjct: 54 RVQATILQDDEEKVVVEESFKAETSTGTEPLEEPNMSSSSTS-----AFETWIIKLEQGVNVFLTDSVIKILDTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 190
BLAST of GT620207 vs. TAIR peptide
Match: AT4G22260.1 (| Symbols: IM, IM1 | Alternative oxidase family protein | chr4:11769967-11772350 REVERSE LENGTH=351) HSP 1 Score: 199.904 bits (507), Expect = 9.910e-52 Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = 3 Query: 237 RIRASLLQDKEDKVILQDSFPSKT---TSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653 R++A++LQD E+KV++++SF ++T T PL+ + A+E +IK+EQ VN+FLTDSVIKILD LY DR YARFFVLETIARVPYFAFMS+LHMYE+FGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W Sbjct: 54 RVQATILQDDEEKVVVEESFKAETSTGTEPLEEPNMSSSSTS-----AFETWIIKLEQGVNVFLTDSVIKILDTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 190 The following BLAST results are available for this feature:
BLAST of GT620207 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620207 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT620207 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620207 ID=GT620207; Name=GT620207; organism=Lens culinaris; type=EST; length=655bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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