GT620207

EST Overview
NameGT620207
Unique NameGT620207
TypeEST
OrganismLens culinaris (lentil)
Sequence length655
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT620207 vs. TrEMBL
Match: Q2HTI6_MEDTR (Alternative oxidase OS=Medicago truncatula GN=MtrDRAFT_AC150441g3v1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.895e-70
Identity = 141/177 (79.66%), Postives = 148/177 (83.62%), Query Frame = 3
Query:  138 AAAMISSSLFPTTHLNKPHTSQ----FRPLSFRPSFSRIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXX-AWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            + AM SSSLFP T LNK  +S+    FRPLSFRP   RIR+SLLQDKEDKVI Q++FPSKT SPLDS T N           AWE+GVIKVEQSVNIFLTDSVIKILDALY DRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW
Sbjct:    3 STAMFSSSLFPITPLNKLSSSRNSLIFRPLSFRPPLFRIRSSLLQDKEDKVITQNTFPSKT-SPLDSVTENSTNDDDTSSTSAWEKGVIKVEQSVNIFLTDSVIKILDALYRDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 178          
BLAST of GT620207 vs. TrEMBL
Match: C6T8G8_SOYBN (Alternative oxidase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.428e-62
Identity = 124/171 (72.51%), Postives = 139/171 (81.29%), Query Frame = 3
Query:  141 AAMISSSLFPTTHLNKPHTSQFRPLSFRPSFSRIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            AA+ SSSLF ++ L KP +S +  +   P   R R+ LLQDKE+KVI+QDSFPSKT SPL SA  +          A+E+ +IKVEQSVNIFLTDSVIKILD LYHDR+YARFFVLETIARVPYFAFMS+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW
Sbjct:    2 AAIFSSSLFVSSSLPKPLSSSYSRIHKAPQLFRARSLLLQDKEEKVIVQDSFPSKT-SPLHSADKSTSGNSINTS-AFEKRIIKVEQSVNIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 170          
BLAST of GT620207 vs. TrEMBL
Match: Q0H3C8_COFCA (Alternative oxidase OS=Coffea canephora GN=PTOX PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.772e-52
Identity = 106/166 (63.86%), Postives = 128/166 (77.11%), Query Frame = 3
Query:  156 SSLFPTTHLNKPHTSQFRPLSFRPSFSRIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            S L   T  +  HT+  RPLS R SF R++A++LQ+ E KV++++SF SK+  P +   GN            E+ V+K+EQS+NIFLTDSVIKILD LYHDR+YARFFVLETIARVPYFAFMS+LH+YESFGWWRRAD  +VHFAESWNEMHHLLIMEELGGN+W
Sbjct:   38 SGLNVVTSPHHRHTATQRPLS-RNSF-RVQATVLQEDEQKVVVEESFQSKSY-PENGGGGNGEPPDASSSSGLEKWVVKIEQSINIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHLYESFGWWRRADLSEVHFAESWNEMHHLLIMEELGGNSW 200          
BLAST of GT620207 vs. TrEMBL
Match: Q9FZ04_CAPAN (Alternative oxidase OS=Capsicum annuum GN=PTOX PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.733e-51
Identity = 100/150 (66.67%), Postives = 118/150 (78.67%), Query Frame = 3
Query:  216 SFRPSFSR----IRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            +F+PS SR    +RA+LL++ E++V+++ SF  K+         N            E+ VIK+EQSVNIFLTDSVIKILD LYHDR+YARFFVLETIARVPYFAF+S+LH+YESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW
Sbjct:   43 TFQPSLSRKSSRVRATLLKENEEEVVVEKSFAPKSFPGNVGGGNNGEPPDNSSSNGLEKWVIKIEQSVNIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFISVLHLYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 192          
BLAST of GT620207 vs. TrEMBL
Match: D7ME58_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492640 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.179e-50
Identity = 101/156 (64.74%), Postives = 122/156 (78.21%), Query Frame = 3
Query:  207 RPLSFRP----SFSRIRASLLQDKEDKVILQDSFPSKTTS---PLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            RPLS R     +  R++A++LQD E+KV++++SF ++T +   PL+    N          A+E  +IK+EQ VN+FLTDSVIKILD LY DR YARFFVLETIARVPYFAFMS+LHMYE+FGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W
Sbjct:   40 RPLSSRRLLFRNIDRVQATILQDDEEKVVVEESFKAETFTGKEPLEEPNMNSSSSS-----AFESWIIKLEQGVNVFLTDSVIKILDTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 190          
BLAST of GT620207 vs. TrEMBL
Match: B9RXE2_RICCO (Alternative oxidase OS=Ricinus communis GN=RCOM_0903090 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.339e-50
Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 3
Query:  237 RIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            R++A++L++ E+KV++ ++F  K+ +  D   G           + E+ VIK+EQSVN+FLTDSVIKILDA YHDR+YARFFVLETIARVPYFAFMS+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W
Sbjct:   50 RVQATVLRENEEKVVIDETFQPKSFTDDDDGKGGRTGGDPPDT-SLERWVIKLEQSVNVFLTDSVIKILDAFYHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 187          
BLAST of GT620207 vs. TrEMBL
Match: Q9FEC9_SOLLC (Alternative oxidase OS=Solanum lycopersicum GN=PTOX PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.279e-50
Identity = 96/139 (69.06%), Postives = 111/139 (79.86%), Query Frame = 3
Query:  237 RIRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            R+RA+LLQ+ E++V+++ SF  K+         N            E+ VIK+EQSVNI LTDSVIKILD LYH+RNYARFFVLETIARVPYFAF+S+LHMYESFGWWRRADY+KVHFAESWNEMHHLLIMEELGGNAW
Sbjct:   63 RVRATLLQENEEEVVVEKSFAPKSFPDNVGGGSNGKPPDDSSSNGLEKWVIKLEQSVNILLTDSVIKILDTLYHNRNYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYMKVHFAESWNEMHHLLIMEELGGNAW 201          
BLAST of GT620207 vs. TrEMBL
Match: D7UE66_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_399.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006689001 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.412e-49
Identity = 107/188 (56.91%), Postives = 130/188 (69.15%), Query Frame = 3
Query:  141 AAMISSSLFPTT----------HL---NKPHTSQFRPLSFRPSFSR----IRASLLQDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            AA +SS++F  +          HL   + P++    PLS     SR    ++A++LQ+ E+KV +++SF S +    DS   +             + VIK EQS N+FLT+SVIKILD LYHDR+YARFFVLETIARVPYFAFMS+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW
Sbjct:    2 AASLSSAVFVVSVPSLKAKKGRHLGSFSSPNSFHCSPLSSSRFLSRKFHSVQATILQENEEKVTVEESFQSNSFPEDDSKGCSGAPQDSSSSSVLNRWVIKFEQSFNVFLTESVIKILDTLYHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 189          
BLAST of GT620207 vs. TrEMBL
Match: B9HZH9_POPTR (Alternative oxidase OS=Populus trichocarpa GN=POPTRDRAFT_1093171 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.478e-48
Identity = 98/148 (66.22%), Postives = 117/148 (79.05%), Query Frame = 3
Query:  219 FRPS--FSRIRASLL-QDKEDKVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            F PS    R++A++L +D+E KV++++SF  KT +  +   G+           W    IK+EQSVN+FLTDSVIKILD LYHDR+YARFFVLETIARVPYFAF+S+LHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W
Sbjct:   49 FLPSRKLCRVQATILREDEEKKVVVEESFQPKTFTH-EPVRGSPQSSSPGGLETW---AIKLEQSVNVFLTDSVIKILDTLYHDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 192          
BLAST of GT620207 vs. TrEMBL
Match: B9N8H5_POPTR (Alternative oxidase OS=Populus trichocarpa GN=POPTRDRAFT_1117798 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.333e-44
Identity = 89/155 (57.42%), Postives = 116/155 (74.84%), Query Frame = 3
Query:  189 PHTSQFRPLSFRPSFSRIRASLLQDKED-KVILQDSFPSKTTSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNA 650
            P +  F P +    F R++A++ ++ ED KV++++SF   T +      G             ++ V+K+EQSVN+FLTDSV+ ILDALYH R+YARF+VLETIARVPYFAF+S+LH+YESFGWWRR+DY+KVHFAESWNEMHHLLIMEELGGN+
Sbjct:   44 PTSLPFPPSTRSAKFCRVQATVFKENEDEKVVVEESFRPSTFTH-----GPENSPQPSSPTELDKWVVKLEQSVNVFLTDSVVTILDALYHGRDYARFYVLETIARVPYFAFISVLHLYESFGWWRRSDYIKVHFAESWNEMHHLLIMEELGGNS 193          
BLAST of GT620207 vs. SwissProt
Match: AOX4_ARATH (Alternative oxidase 4, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=AOX4 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 9.705e-51
Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = 3
Query:  237 RIRASLLQDKEDKVILQDSFPSKT---TSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            R++A++LQD E+KV++++SF ++T   T PL+    +          A+E  +IK+EQ VN+FLTDSVIKILD LY DR YARFFVLETIARVPYFAFMS+LHMYE+FGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W
Sbjct:   54 RVQATILQDDEEKVVVEESFKAETSTGTEPLEEPNMSSSSTS-----AFETWIIKLEQGVNVFLTDSVIKILDTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 190          
BLAST of GT620207 vs. TAIR peptide
Match: AT4G22260.1 (| Symbols: IM, IM1 | Alternative oxidase family protein | chr4:11769967-11772350 REVERSE LENGTH=351)

HSP 1 Score: 199.904 bits (507), Expect = 9.910e-52
Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = 3
Query:  237 RIRASLLQDKEDKVILQDSFPSKT---TSPLDSATGNXXXXXXXXXXAWEQGVIKVEQSVNIFLTDSVIKILDALYHDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 653
            R++A++LQD E+KV++++SF ++T   T PL+    +          A+E  +IK+EQ VN+FLTDSVIKILD LY DR YARFFVLETIARVPYFAFMS+LHMYE+FGWWRRADYLKVHFAESWNEMHHLLIMEELGGN+W
Sbjct:   54 RVQATILQDDEEKVVVEESFKAETSTGTEPLEEPNMSSSSTS-----AFETWIIKLEQGVNVFLTDSVIKILDTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNSW 190          
The following BLAST results are available for this feature:
BLAST of GT620207 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2HTI6_MEDTR1.895e-7079.66Alternative oxidase OS=Medicago truncatula GN=MtrD... [more]
C6T8G8_SOYBN9.428e-6272.51Alternative oxidase OS=Glycine max PE=2 SV=1[more]
Q0H3C8_COFCA6.772e-5263.86Alternative oxidase OS=Coffea canephora GN=PTOX PE... [more]
Q9FZ04_CAPAN5.733e-5166.67Alternative oxidase OS=Capsicum annuum GN=PTOX PE=... [more]
D7ME58_ARALY2.179e-5064.74Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9RXE2_RICCO6.339e-5068.35Alternative oxidase OS=Ricinus communis GN=RCOM_09... [more]
Q9FEC9_SOLLC8.279e-5069.06Alternative oxidase OS=Solanum lycopersicum GN=PTO... [more]
D7UE66_VITVI1.412e-4956.91Whole genome shotgun sequence of line PN40024, sca... [more]
B9HZH9_POPTR3.478e-4866.22Alternative oxidase OS=Populus trichocarpa GN=POPT... [more]
B9N8H5_POPTR2.333e-4457.42Alternative oxidase OS=Populus trichocarpa GN=POPT... [more]
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BLAST of GT620207 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
AOX4_ARATH9.705e-5167.61Alternative oxidase 4, chloroplastic/chromoplastic... [more]
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BLAST of GT620207 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G22260.19.910e-5267.61| Symbols: IM, IM1 | Alternative oxidase family pr... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002680Alternative oxidasePFAMPF01786AOXcoord: 100..197
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 19..27
score: NAcoord: 97..106
score
NoneNo IPR availableSEGsegsegcoord: 108..116
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620207 ID=GT620207; Name=GT620207; organism=Lens culinaris; type=EST; length=655bp
CGATTTATAATAAACCCGCGAAACGACAAATAACATGAAGACACCACTAA
AACCAACGCCCCCTTTACCATTCCCACTTAAATAATATCCCAAACCAACA
CTCCCTCCATCTCCACCACCCCCTACCACCCTTCATGGCGGCGGCGATGA
TCTCTTCATCCCTCTTTCCAACCACACATCTTAACAAACCACATACCTCC
CAATTCCGTCCTCTTTCATTTCGTCCATCGTTTTCAAGGATTCGTGCTTC
TCTATTGCAAGATAAAGAAGATAAAGTTATTCTACAAGACTCTTTTCCTT
CTAAAACAACCTCTCCTTTAGATTCAGCTACTGGTAACTCGAGTGATGAT
AGTATTTCATCTTCTAGCGCTTGGGAACAAGGGGTTATCAAAGTTGAACA
ATCAGTGAATATCTTTCTCACGGACTCTGTGATTAAGATACTTGATGCTC
TTTACCATGATAGGAATTATGCAAGGTTTTTTGTGCTTGAGACTATTGCT
AGGGTACCTTATTTTGCCTTTATGTCAATTCTTCATATGTATGAGAGTTT
TGGCTGGTGGAGACGTGCGGATTATCTGAAAGTGCATTTTGCCGAGAGCT
GGAATGAAATGCACCATTTGCTCATCATGGAAGAACTTGGAGGGAATGCT
TGGTG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005740mitochondrial envelope
Vocabulary: Biological Process
TermDefinition
GO:0007585respiratory gaseous exchange by respiratory system
GO:0055114obsolete oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR002680AOX