GT620276
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620276 vs. TrEMBL
Match: Q2HVX3_MEDTR (Asp/Glu racemase OS=Medicago truncatula GN=MtrDRAFT_AC148340g3v2 PE=4 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 5.236e-53 Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329 NATLAAGFYKEKLQ EGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMD LARSTIKWVRS G+NT Sbjct: 213 NATLAAGFYKEKLQNEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDALARSTIKWVRSCGDNT 321
BLAST of GT620276 vs. TrEMBL
Match: B9GWD2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645866 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 7.579e-44 Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329 NATLAAGFY+EKLQ EGFEV+LPD+ATMEHT+IPA EAL R DMEGA NLLRIALQVLLVRAVN VILAS+EMRDVLP DDPLLKKCIDPMD LARSTIKW +++ + T Sbjct: 222 NATLAAGFYQEKLQNEGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVILASEEMRDVLPEDDPLLKKCIDPMDALARSTIKWAQAADKGT 330
BLAST of GT620276 vs. TrEMBL
Match: A5AFE5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015733 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.094e-42 Identity = 87/109 (79.82%), Postives = 97/109 (88.99%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329 NATL AGFY+EKLQ+EGFEV+LPD+ATMEHTVIPA EAL+RKDMEGA NLLRIALQVLLVRAVN VILASD+M D+LP DDPLLKKC+DPMD LARSTI W +S + T Sbjct: 222 NATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQSVEKGT 330
BLAST of GT620276 vs. TrEMBL
Match: D7U0Y3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017270001 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 5.431e-42 Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314 NATL AGFY+EKLQ+EGFEV+LPD+ATMEHTVIPA EA +RKDMEGA NLLRIALQVLLVRAVN VILASD+M D+LP DDPLLKKC+DPMD LARSTI W +S Sbjct: 333 NATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQS 436
BLAST of GT620276 vs. TrEMBL
Match: B9RV29_RICCO (Racemase and epimerase, acting on amino acids and derivatives, putative OS=Ricinus communis GN=RCOM_0898340 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 9.264e-42 Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329 NATL AGFY+EKLQ EGFEV+LPD+ATMEHT+IPA AL+RKDMEGA NLLRIALQVLLVRAVN VILASD+MRD+LP +DPLLKKCIDPMD L R+TIKW +++ ++T Sbjct: 222 NATLTAGFYQEKLQSEGFEVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMRDLLPQNDPLLKKCIDPMDALVRATIKWAKAAEKDT 330
BLAST of GT620276 vs. TrEMBL
Match: Q9XI28_ARATH (F9L1.36 protein OS=Arabidopsis thaliana GN=At1g15410 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.295e-39 Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314 +ATL+AGFY+EKLQ GFE +LPD+ATMEHTVIP+ EA+ RKDMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW + Sbjct: 224 SATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327
BLAST of GT620276 vs. TrEMBL
Match: D7KCR1_ARALY (Aspartate-glutamate racemase family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471741 PE=4 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.587e-39 Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314 +ATL+AGFY+EKLQ GFE +LPD+ATMEHTVIP+ EA+ R+DMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW + Sbjct: 224 SATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKREDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327
BLAST of GT620276 vs. TrEMBL
Match: Q0WLN1_ARATH (Putative uncharacterized protein At1g15410 OS=Arabidopsis thaliana GN=At1g15410 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.136e-38 Identity = 78/104 (75.00%), Postives = 90/104 (86.54%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314 +ATL+AGFY+EKLQ GFE + PD+ATMEHTVIP+ EA+ RKDMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW + Sbjct: 224 SATLSAGFYQEKLQSNGFEAVPPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327
BLAST of GT620276 vs. TrEMBL
Match: D7TBY4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015502001 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.261e-37 Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 9 TLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGE 323 TL AGFY+EKLQ +GFEV+LPD ATMEH V+PA EAL RKDMEGA NLLRIA+ + L+RAVN VILASDEM+D+LP DDPL KKCI+PMD LARSTI W +S E Sbjct: 56 TLMAGFYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKSIEE 160
BLAST of GT620276 vs. TrEMBL
Match: A5BHI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011681 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.261e-37 Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 9 TLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGE 323 TL AGFY+EKLQ +GFEV+LPD ATMEH V+PA EAL RKDMEGA NLLRIA+ + L+RAVN VILASDEM+D+LP DDPL KKCI+PMD LARSTI W +S E Sbjct: 215 TLMAGFYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKSIEE 319
BLAST of GT620276 vs. TAIR peptide
Match: AT1G15410.1 (| Symbols: | aspartate-glutamate racemase family | chr1:5299577-5300681 FORWARD LENGTH=330) HSP 1 Score: 164.466 bits (415), Expect = 2.887e-41 Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 3 Query: 3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314 +ATL+AGFY+EKLQ GFE +LPD+ATMEHTVIP+ EA+ RKDMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW + Sbjct: 224 SATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327 The following BLAST results are available for this feature:
BLAST of GT620276 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620276 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620276 ID=GT620276; Name=GT620276; organism=Lens culinaris; type=EST; length=506bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|