GT620276

EST Overview
NameGT620276
Unique NameGT620276
TypeEST
OrganismLens culinaris (lentil)
Sequence length506
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT620276 vs. TrEMBL
Match: Q2HVX3_MEDTR (Asp/Glu racemase OS=Medicago truncatula GN=MtrDRAFT_AC148340g3v2 PE=4 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.236e-53
Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329
            NATLAAGFYKEKLQ EGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMD LARSTIKWVRS G+NT
Sbjct:  213 NATLAAGFYKEKLQNEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDALARSTIKWVRSCGDNT 321          
BLAST of GT620276 vs. TrEMBL
Match: B9GWD2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645866 PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 7.579e-44
Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329
            NATLAAGFY+EKLQ EGFEV+LPD+ATMEHT+IPA EAL R DMEGA NLLRIALQVLLVRAVN VILAS+EMRDVLP DDPLLKKCIDPMD LARSTIKW +++ + T
Sbjct:  222 NATLAAGFYQEKLQNEGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVILASEEMRDVLPEDDPLLKKCIDPMDALARSTIKWAQAADKGT 330          
BLAST of GT620276 vs. TrEMBL
Match: A5AFE5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015733 PE=4 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.094e-42
Identity = 87/109 (79.82%), Postives = 97/109 (88.99%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329
            NATL AGFY+EKLQ+EGFEV+LPD+ATMEHTVIPA EAL+RKDMEGA NLLRIALQVLLVRAVN VILASD+M D+LP DDPLLKKC+DPMD LARSTI W +S  + T
Sbjct:  222 NATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQSVEKGT 330          
BLAST of GT620276 vs. TrEMBL
Match: D7U0Y3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017270001 PE=4 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.431e-42
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314
            NATL AGFY+EKLQ+EGFEV+LPD+ATMEHTVIPA EA +RKDMEGA NLLRIALQVLLVRAVN VILASD+M D+LP DDPLLKKC+DPMD LARSTI W +S
Sbjct:  333 NATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQS 436          
BLAST of GT620276 vs. TrEMBL
Match: B9RV29_RICCO (Racemase and epimerase, acting on amino acids and derivatives, putative OS=Ricinus communis GN=RCOM_0898340 PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.264e-42
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGENT 329
            NATL AGFY+EKLQ EGFEV+LPD+ATMEHT+IPA  AL+RKDMEGA NLLRIALQVLLVRAVN VILASD+MRD+LP +DPLLKKCIDPMD L R+TIKW +++ ++T
Sbjct:  222 NATLTAGFYQEKLQSEGFEVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMRDLLPQNDPLLKKCIDPMDALVRATIKWAKAAEKDT 330          
BLAST of GT620276 vs. TrEMBL
Match: Q9XI28_ARATH (F9L1.36 protein OS=Arabidopsis thaliana GN=At1g15410 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.295e-39
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314
            +ATL+AGFY+EKLQ  GFE +LPD+ATMEHTVIP+ EA+ RKDMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW  +
Sbjct:  224 SATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327          
BLAST of GT620276 vs. TrEMBL
Match: D7KCR1_ARALY (Aspartate-glutamate racemase family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471741 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.587e-39
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314
            +ATL+AGFY+EKLQ  GFE +LPD+ATMEHTVIP+ EA+ R+DMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW  +
Sbjct:  224 SATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKREDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327          
BLAST of GT620276 vs. TrEMBL
Match: Q0WLN1_ARATH (Putative uncharacterized protein At1g15410 OS=Arabidopsis thaliana GN=At1g15410 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.136e-38
Identity = 78/104 (75.00%), Postives = 90/104 (86.54%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314
            +ATL+AGFY+EKLQ  GFE + PD+ATMEHTVIP+ EA+ RKDMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW  +
Sbjct:  224 SATLSAGFYQEKLQSNGFEAVPPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327          
BLAST of GT620276 vs. TrEMBL
Match: D7TBY4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015502001 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.261e-37
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 3
Query:    9 TLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGE 323
            TL AGFY+EKLQ +GFEV+LPD ATMEH V+PA EAL RKDMEGA NLLRIA+ + L+RAVN VILASDEM+D+LP DDPL KKCI+PMD LARSTI W +S  E
Sbjct:   56 TLMAGFYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKSIEE 160          
BLAST of GT620276 vs. TrEMBL
Match: A5BHI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011681 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.261e-37
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 3
Query:    9 TLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRSSGE 323
            TL AGFY+EKLQ +GFEV+LPD ATMEH V+PA EAL RKDMEGA NLLRIA+ + L+RAVN VILASDEM+D+LP DDPL KKCI+PMD LARSTI W +S  E
Sbjct:  215 TLMAGFYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKSIEE 319          
BLAST of GT620276 vs. TAIR peptide
Match: AT1G15410.1 (| Symbols: | aspartate-glutamate racemase family | chr1:5299577-5300681 FORWARD LENGTH=330)

HSP 1 Score: 164.466 bits (415), Expect = 2.887e-41
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 3
Query:    3 NATLAAGFYKEKLQKEGFEVILPDRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCIDPMDVLARSTIKWVRS 314
            +ATL+AGFY+EKLQ  GFE +LPD+ATMEHTVIP+ EA+ RKDMEGA NLLRIALQVLLV+AVN V+L SDEMRD+LP DDPLLKKC+DPMD LARS IKW  +
Sbjct:  224 SATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327          
The following BLAST results are available for this feature:
BLAST of GT620276 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2HVX3_MEDTR5.236e-5396.33Asp/Glu racemase OS=Medicago truncatula GN=MtrDRAF... [more]
B9GWD2_POPTR7.579e-4481.65Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5AFE5_VITVI1.094e-4279.82Putative uncharacterized protein OS=Vitis vinifera... [more]
D7U0Y3_VITVI5.431e-4281.73Whole genome shotgun sequence of line PN40024, sca... [more]
B9RV29_RICCO9.264e-4277.06Racemase and epimerase, acting on amino acids and ... [more]
Q9XI28_ARATH3.295e-3975.96F9L1.36 protein OS=Arabidopsis thaliana GN=At1g154... [more]
D7KCR1_ARALY9.587e-3975.00Aspartate-glutamate racemase family OS=Arabidopsis... [more]
Q0WLN1_ARATH2.136e-3875.00Putative uncharacterized protein At1g15410 OS=Arab... [more]
D7TBY4_VITVI5.261e-3773.33Whole genome shotgun sequence of line PN40024, sca... [more]
A5BHI0_VITVI5.261e-3773.33Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of GT620276 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G15410.12.887e-4175.96| Symbols: | aspartate-glutamate racemase family ... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 28..42
score
NoneNo IPR availableSEGsegsegcoord: 58..70
score
IPR001920Asp/Glu racemaseGENE3D3.40.50.1860no descriptioncoord: 2..89
score: 8.3
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 2..105
score: 1.6

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620276 ID=GT620276; Name=GT620276; organism=Lens culinaris; type=EST; length=506bp
CAAATGCAACTCTAGCAGCTGGTTTTTACAAAGAGAAGCTTCAGAAAGAA
GGTTTTGAAGTTATCCTGCCTGATAGAGCAACTATGGAGCATACAGTGAT
ACCTGCGACTGAAGCTTTGAGTCGAAAAGACATGGAAGGAGCGTGCAATC
TTTTGAGAATTGCACTTCAAGTTCTTTTGGTGAGGGCAGTTAATTTTGTT
ATACTTGCTTCTGATGAAATGCGGGATGTCTTACCCCACGATGATCCTCT
TCTCAAGAAATGTATTGATCCAATGGACGTCTTAGCCCGGTCAACTATCA
AATGGGTAAGATCTTCAGGAGAAAATACATGAAAAACAATGGAAAGCACA
GTTGTATTTCACTATGTATCAATATTCTTCTGATTTTATTGATACCCTGC
GAACTTTTCAATTCACCAATACTGTAACAAGCCAAATATGCATGTTTTTT
GTTCAAGTAGCATGTATTTCTTCTGTATTCATGTTCAAAATCAATTTTGT
TGAGAT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR001920Asp/Glu_race