GT620399
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620399 vs. TrEMBL
Match: D7U9C9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_41.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026083001 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.023e-20 Identity = 52/85 (61.18%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 51 YDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPKGSEAPTQILTQD 305 YDLDAKWDA LDLTVRR VYSSFAGAF GLLLFRSP TRW YTECS+ F G PA PK S+AP QD Sbjct: 11 YDLDAKWDACLDLTVRRFVYSSFAGAFGGLLLFRSPVTRWASVAFGAGLGLGSAYTECSQKFGGYPAMFLPPKISDAPASQEGQD 95
BLAST of GT620399 vs. TrEMBL
Match: C6T522_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.014e-18 Identity = 47/81 (58.02%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 48 KYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPKGSEAPTQ 290 ++D+DAKWDA +DLTVRR VYS+ AGAF GLL FRSP TRW Y ECSRLFDG P L PK SE TQ Sbjct: 11 QFDIDAKWDACIDLTVRRFVYSATAGAFGGLLFFRSPVTRWASIAFGAGVGIGSAYAECSRLFDGPPTNLPLPKVSETATQ 91
BLAST of GT620399 vs. TrEMBL
Match: B9MWE3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_592304 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.259e-18 Identity = 48/86 (55.81%), Postives = 58/86 (67.44%), Query Frame = 3 Query: 39 MGDKYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPK-GSEAPTQI 293 M +K D++AKWDA LDL+VRR VYSS AGAF GLLLFR+P TRW YT+CS++FDGS AKL PK S AP ++ Sbjct: 1 MAEKTDVNAKWDACLDLSVRRFVYSSLAGAFGGLLLFRTPVTRWASIAFGAGVGIGSAYTDCSQIFDGSTAKLVPPKTTSSAPEEL 86
BLAST of GT620399 vs. TrEMBL
Match: A9PDC3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_826237 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.951e-18 Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 3 Query: 39 MGDKYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPKGSEAPTQILT 299 M +K D++AKWDA LDL+VRR VYSS AGAF GLLLFRSP +RW YT+CSR+F GSPAK+ PK + + + LT Sbjct: 1 MAEKTDVNAKWDACLDLSVRRFVYSSLAGAFGGLLLFRSPVSRWASVAFGAGVGIGSAYTDCSRIFQGSPAKMECPKKTSSVHKELT 87
BLAST of GT620399 vs. TrEMBL
Match: C5WT22_SORBI (Putative uncharacterized protein Sb01g001810 OS=Sorghum bicolor GN=Sb01g001810 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.585e-18 Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 48 KYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPKGSEAPT 287 +YDLDAKWDA LDL++RR+ YSS AGAFAGLLLFRSP TRW YTECS LF+G+P K + PK S P+ Sbjct: 33 RYDLDAKWDACLDLSIRRVAYSSLAGAFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAPPKWS-PKVSTIPS 111
BLAST of GT620399 vs. TrEMBL
Match: B6SID3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.492e-17 Identity = 45/80 (56.25%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 48 KYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPKGSEAPT 287 +YDLDAKWDA LDL++RR+ YSS GAFAGLLLFRSP TRW YTECS LF+G+P PK S P+ Sbjct: 31 RYDLDAKWDACLDLSIRRVAYSSLGGAFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAPK--CSPKVSTIPS 108
BLAST of GT620399 vs. TrEMBL
Match: B8AN69_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14258 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.240e-16 Identity = 44/80 (55.00%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 48 KYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPKGSEAPT 287 +YDLDAKWDA LDL++RR+ YS+ G FAGLLLFRSP TRW YTECS LF+G+P K + PK S P+ Sbjct: 607 RYDLDAKWDACLDLSIRRVAYSTLGGTFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAPPKWS-PKVSTVPS 685
BLAST of GT620399 vs. TrEMBL
Match: Q6AVR1_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0075M12.11 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.115e-16 Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 48 KYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAKLAQPKGSEAPT 287 +YDLDAKWDA LD+++RR+ YS+ G FAGLLLFRSP TRW YTECS LF+G+P K + PK S P+ Sbjct: 40 RYDLDAKWDACLDISIRRVAYSTLGGTFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAPPKWS-PKVSTVPS 118
BLAST of GT620399 vs. TrEMBL
Match: Q8GWC7_ARATH (Putative uncharacterized protein At1g72165/T9N14_2 OS=Arabidopsis thaliana GN=At1g72165/T9N14_2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.762e-16 Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 36 SMGDKYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFD---GSPAKLAQPKGSEAPTQILTQDSE 311 S+ +YD++AKWDA LDLTVRR VYSS GAFAGLL FRSP TRW Y++CSR FD S A LA PK + T ++Q ++ Sbjct: 7 SVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGIGIGSAYSDCSRAFDSPSSSSANLAAPKNNITETSPVSQAAD 101
BLAST of GT620399 vs. TrEMBL
Match: C0PE69_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.607e-16 Identity = 41/67 (61.19%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 48 KYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSP 248 +YDLDAKWDA LDL++RR+ YSS GAFAGLLLFRSP TRW YTECS LF+G+P Sbjct: 31 RYDLDAKWDACLDLSIRRVAYSSLGGAFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAP 97
BLAST of GT620399 vs. TAIR peptide
Match: AT1G72170.1 (| Symbols: | Domain of unknown function (DUF543) | chr1:27156403-27157516 FORWARD LENGTH=102) HSP 1 Score: 88.5817 bits (218), Expect = 2.275e-18 Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 36 SMGDKYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFD---GSPAKLAQPKGSEAPTQILTQDSE 311 S+ +YD++AKWDA LDLTVRR VYSS GAFAGLL FRSP TRW Y++CSR FD S A LA PK + T ++Q ++ Sbjct: 7 SVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGIGIGSAYSDCSRAFDSPSSSSANLAAPKNNITETSPVSQAAD 101
BLAST of GT620399 vs. TAIR peptide
Match: AT1G22520.2 (| Symbols: | Domain of unknown function (DUF543) | chr1:7952996-7954304 REVERSE LENGTH=179) HSP 1 Score: 84.3445 bits (207), Expect = 4.290e-17 Identity = 44/86 (51.16%), Postives = 52/86 (60.47%), Query Frame = 3 Query: 33 RSMGDKYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAK----LAQPKGSE 278 +S + D++AKWDA LDLT RR VYSS GAFAGLL FRSP TRW YT+CSR+FD S + LA PK +E Sbjct: 5 KSNSSESDVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRVFDASSSTSATLLAAPKSTE 90
BLAST of GT620399 vs. TAIR peptide
Match: AT1G22520.1 (| Symbols: | Domain of unknown function (DUF543) | chr1:7953299-7954304 REVERSE LENGTH=99) HSP 1 Score: 84.3445 bits (207), Expect = 4.290e-17 Identity = 44/86 (51.16%), Postives = 52/86 (60.47%), Query Frame = 3 Query: 33 RSMGDKYDLDAKWDASLDLTVRRLVYSSFAGAFAGLLLFRSPQTRWXXXXXXXXXXXXXXYTECSRLFDGSPAK----LAQPKGSE 278 +S + D++AKWDA LDLT RR VYSS GAFAGLL FRSP TRW YT+CSR+FD S + LA PK +E Sbjct: 5 KSNSSESDVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRVFDASSSTSATLLAAPKSTE 90 The following BLAST results are available for this feature:
BLAST of GT620399 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620399 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620399 ID=GT620399; Name=GT620399; organism=Lens culinaris; type=EST; length=541bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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