GT620878

EST Overview
NameGT620878
Unique NameGT620878
TypeEST
OrganismLens culinaris (lentil)
Sequence length343
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of GT620878 vs. TrEMBL
Match: Q6WAY7_PEA (Gag/pol polyprotein (Fragment) OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.547e-9
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 3 
Query:    6 YDANARCEFHSGAPSHGTENCKALKNKVQDLIDKKQLTFGERIPLVNGQL 155
            YDAN RC+FHSGAP H TE C+AL++KVQDLID K + F     +VN  +
Sbjct:  449 YDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFAPVPNVVNNPM 498
[Close]
BLAST of GT620878 vs. TrEMBL
Match: Q6WAY5_PEA (Gag/pol polyprotein (Fragment) OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.547e-9
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 3 
Query:    6 YDANARCEFHSGAPSHGTENCKALKNKVQDLIDKKQLTFGERIPLVNGQL 155
            YDAN RC+FHSGAP H TE C+AL++KVQDLID K + F     +VN  +
Sbjct:  449 YDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFAPVPNVVNNPM 498
[Close]
BLAST of GT620878 vs. TrEMBL
Match: Q6WAY3_PEA (Gag/pol polyprotein OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.880e-9
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 3 
Query:    6 YDANARCEFHSGAPSHGTENCKALKNKVQDLIDKKQLTFGERIPLVNGQL 155
            YDAN RC+FHSGAP H TE C+AL++KVQDLID   + F     +VN  +
Sbjct:  447 YDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDANAINFAPVPNVVNNPM 496
The following BLAST results are available for this feature:
BLAST of GT620878 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
Q6WAY7_PEA1.547e-958.00Gag/pol polyprotein (Fragment) OS=Pisum sativum PE... [more]
Q6WAY5_PEA1.547e-958.00Gag/pol polyprotein (Fragment) OS=Pisum sativum PE... [more]
Q6WAY3_PEA5.880e-956.00Gag/pol polyprotein OS=Pisum sativum PE=4 SV=1[more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620878 ID=GT620878; Name=GT620878; organism=Lens culinaris; type=EST; length=343bp
CACATTATGATGCCAATGCTAGGTGCGAATTCCATTCAGGGGCACCCAGT
CACGGAACCGAGAACTGTAAGGCATTGAAAAACAAAGTCCAAGATTTGAT
TGACAAAAAGCAGCTCACTTTTGGAGAAAGGATACCATTGGTGAATGGTC
AGCTGTTACTCTAATATGTAGTATCTCCAAGCCAAGAAGTCTACCAGAAA
AATTCAAGATCAGAAGGCCTTTTTGTTTTTAAGTTGTAATGTCTTTTTGT
GGTGTATTAATTGTACTTTAAGTTGTACTTTTTGATTTGTAACTCTGACA
GTTAAGCATGCATGTTTTTGACTCAATCCATTCGTATTCGCTC
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