GT620940
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620940 vs. TrEMBL
Match: Q7XY14_SOYBN (C-type cytochrome biogenesis protein OS=Glycine max GN=CCDA PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.632e-51 Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASK+PVIGGSLLLTYTTGY+SPLLLAASFAGALQSLLSFRK+SAWINP+SGAMLLGGGVYTFLDRLFP TM M Sbjct: 237 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPVTMVM 344
BLAST of GT620940 vs. TrEMBL
Match: B9N580_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_269063 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.306e-50 Identity = 100/108 (92.59%), Postives = 107/108 (99.07%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASK+PV+GGSLLLTYTTGY++PLLLAASFAGALQSLLSFRK+SAWINP+SGA+LLGGGVYTFLDRLFP TMAM Sbjct: 158 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGVYTFLDRLFPPTMAM 265
BLAST of GT620940 vs. TrEMBL
Match: C6TLS2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.228e-50 Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASK+PVI GSLLLTYTTGY+SPLLLAASFAGALQSLLSFRK+SAWINP+SGAMLLGGGVYTFLDRLFP TM M Sbjct: 233 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIRGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPVTMVM 340
BLAST of GT620940 vs. TrEMBL
Match: Q8GZD1_LOTJA (Chloroplast biogenesis protein OS=Lotus japonicus GN=CCDA PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.964e-50 Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPA-TMAM 326 N PSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASK+PVIGGSLLLTYTTGYI+PLLLAASFAGALQSLLSFRKYSAWINP+SGAMLLGGGVYTFLD+LFPA TMAM Sbjct: 237 NLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYIAPLLLAASFAGALQSLLSFRKYSAWINPISGAMLLGGGVYTFLDKLFPATTMAM 345
BLAST of GT620940 vs. TrEMBL
Match: B9SYH7_RICCO (Thiol:disulfide interchange protein dsbD, putative OS=Ricinus communis GN=RCOM_0517680 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.468e-50 Identity = 97/108 (89.81%), Postives = 107/108 (99.07%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASK+P++GGSLLLTYTTGY++PLLLAASFAGALQSLLSFRK+SAWINP+SGA+LLGGGVYTFLDRLFP +M+M Sbjct: 243 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPIVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGVYTFLDRLFPVSMSM 350
BLAST of GT620940 vs. TrEMBL
Match: B8BIW5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35045 PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.933e-47 Identity = 92/105 (87.62%), Postives = 101/105 (96.19%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPAT 317 N PSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S++P++GGSLLLTYTTGY++PLL+AASFAGALQSLLSFR+YSAWINP+SGA LLGGGVYT LDRLFPAT Sbjct: 254 NLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358
BLAST of GT620940 vs. TrEMBL
Match: D7MU78_ARALY (Cytochrome c biogenesis protein family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495514 PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.763e-47 Identity = 95/109 (87.16%), Postives = 104/109 (95.41%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFP-ATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S++PVIGGSLLLTYTTGY++PL++AASFAGALQSLLS RK SAWINP+SGA+LLGGG+YTFLDRLFP ATM M Sbjct: 242 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 350
BLAST of GT620940 vs. TrEMBL
Match: Q6TGR9_DESSO (C-type cytochrome biogenesis protein OS=Descurainia sophia GN=CCDA PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.495e-46 Identity = 93/109 (85.32%), Postives = 104/109 (95.41%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFP-ATMAM 326 NFPSS+QAYLAGLTFALAASPCSTPVLATLLGYVA S++P+IGGSLLLTYTTGY++PL++AASFAGALQSLLS RK SAWINP+SGA+LLGGG+YTFLDRLFP ATM M Sbjct: 245 NFPSSIQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 353
BLAST of GT620940 vs. TrEMBL
Match: C5Y464_SORBI (Putative uncharacterized protein Sb05g002430 OS=Sorghum bicolor GN=Sb05g002430 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.495e-46 Identity = 94/109 (86.24%), Postives = 103/109 (94.50%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPAT-MAM 326 N PS VQAYLAGLTFALAASPCSTPVLATLLGYVA S++P+IGGSLLLTYTTGY++PLL+AASFAGALQSLLSFR+YSAWINP+SGA LLGGGVYT LDR+FPAT MAM Sbjct: 245 NLPSGVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIIGGSLLLTYTTGYVAPLLVAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRVFPATSMAM 353
BLAST of GT620940 vs. TrEMBL
Match: Q8GZC9_MEDTR (Biogenesis protein OS=Medicago truncatula GN=CCDA PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.952e-46 Identity = 100/109 (91.74%), Postives = 101/109 (92.66%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFP-ATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYI P FAGALQSLLSFRKYSAWINP+SGAMLLGGGVYTFLDRLFP ATMAM Sbjct: 231 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYIFPYFW-LFFAGALQSLLSFRKYSAWINPISGAMLLGGGVYTFLDRLFPAATMAM 338
BLAST of GT620940 vs. SwissProt
Match: CCDA2_ORYSJ (Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica GN=CCDA2 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.839e-48 Identity = 92/105 (87.62%), Postives = 101/105 (96.19%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPAT 317 N PSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S++P++GGSLLLTYTTGY++PLL+AASFAGALQSLLSFR+YSAWINP+SGA LLGGGVYT LDRLFPAT Sbjct: 254 NLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358
BLAST of GT620940 vs. SwissProt
Match: CCDA1_ORYSJ (Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa subsp. japonica GN=CCDA1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.839e-48 Identity = 92/105 (87.62%), Postives = 101/105 (96.19%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFPAT 317 N PSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S++P++GGSLLLTYTTGY++PLL+AASFAGALQSLLSFR+YSAWINP+SGA LLGGGVYT LDRLFPAT Sbjct: 259 NLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 363
BLAST of GT620940 vs. SwissProt
Match: CCDA_ARATH (Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana GN=CCDA PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.324e-48 Identity = 95/109 (87.16%), Postives = 104/109 (95.41%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFP-ATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S++PVIGGSLLLTYTTGY++PL++AASFAGALQSLLS RK SAWINP+SGA+LLGGG+YTFLDRLFP ATM M Sbjct: 246 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354
BLAST of GT620940 vs. SwissProt
Match: YCXN_PORPU (Putative cytochrome c-type biogenesis protein dbsD-like OS=Porphyra purpurea PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.598e-9 Identity = 32/101 (31.68%), Postives = 54/101 (53.47%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRL 305 N +++ YL+G+ LA S CSTP+ TLL +V ++ N IG +L Y+ GYI P+++ + F+ + S + P SG +LL G ++ + Sbjct: 137 NTNQNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIGLIFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSI 237
BLAST of GT620940 vs. TAIR peptide
Match: AT5G54290.2 (| Symbols: CcdA | cytochrome c biogenesis protein family | chr5:22051097-22053923 FORWARD LENGTH=355) HSP 1 Score: 190.274 bits (482), Expect = 6.640e-49 Identity = 95/109 (87.16%), Postives = 104/109 (95.41%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFP-ATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S++PVIGGSLLLTYTTGY++PL++AASFAGALQSLLS RK SAWINP+SGA+LLGGG+YTFLDRLFP ATM M Sbjct: 247 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 355
BLAST of GT620940 vs. TAIR peptide
Match: AT5G54290.1 (| Symbols: CcdA | cytochrome c biogenesis protein family | chr5:22051097-22053923 FORWARD LENGTH=354) HSP 1 Score: 190.274 bits (482), Expect = 6.640e-49 Identity = 95/109 (87.16%), Postives = 104/109 (95.41%), Query Frame = 3 Query: 3 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPVSGAMLLGGGVYTFLDRLFP-ATMAM 326 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S++PVIGGSLLLTYTTGY++PL++AASFAGALQSLLS RK SAWINP+SGA+LLGGG+YTFLDRLFP ATM M Sbjct: 246 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354 The following BLAST results are available for this feature:
BLAST of GT620940 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620940 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 4
BLAST of GT620940 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620940 ID=GT620940; Name=GT620940; organism=Lens culinaris; type=EST; length=595bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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