GT621024

EST Overview
NameGT621024
Unique NameGT621024
TypeEST
OrganismLens culinaris (lentil)
Sequence length813
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
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BLAST of GT621024 vs. TAIR peptide
Match: AT5G59100.1 (| Symbols: | Subtilisin-like serine endopeptidase family protein | chr5:23858951-23862087 REVERSE LENGTH=741)

HSP 1 Score: 40.0466 bits (92), Expect = 7.111e-7
Identity = 18/50 (36.00%), Postives = 34/50 (68.00%), Query Frame = -3 
Query:  557 QIFSYSNHHKRHNHFVVTAFGTIGLCQIVLSSSLVWSDGIHNVKNPIILF 706
            ++ S  + +++ +  V  +  +IG  Q V S++L+WSDG HNV++PII++
Sbjct:  690 RVLSMKSMNEKQSFMVTVSSDSIGTKQPV-SANLIWSDGTHNVRSPIIVY 738

HSP 2 Score: 30.8018 bits (68), Expect = 7.111e-7
Identity = 12/32 (37.50%), Postives = 16/32 (50.00%), Query Frame = -1 
Query:  718 PFNVKLPETTTNVGSHNATYKDVIAPIPNVKI 813
            PFN+    T TNVG   +TY   +   P  K+
Sbjct:  652 PFNITFQRTVTNVGMQKSTYNAKVVKFPGSKL 683
The following BLAST results are available for this feature:
BLAST of GT621024 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G59100.17.111e-736.00| Symbols: | Subtilisin-like serine endopeptidase... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 13..27
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT621024 ID=GT621024; Name=GT621024; organism=Lens culinaris; type=EST; length=813bp
TATCTTAGCATGAAGAGCATCCTTTGTTTCCATCAGTTATGGTGTGTCTG
CTGGTCCCAGGGGCTTATACTGTGTAGAAGCTGCTTCATCATTTTTTGGA
CGTGTGCTCTGCTTGAGGAAAGGTTAAAGCAGGATGTCATTGTGCCAAGT
TTCTGGACAAAGAACTGAGTAATGAATATTGATGTTCTCGTGGCTACAAT
TAGCCCTGATGCCAGATATATTGTTGTCGTTCTGCAGCTAGCATGAAAGT
TGACGGATAGAACAAACATGTGATGGTTGTGCACTACGCAATCAACAACT
GCAGAGTTCATTGTTTCGCTGATTTATCAACTGTTGTCGTTGTTGCAGAT
CATAGCACCAGCAGCTGACCAGGACCTTCAACCATGGCCTGAAGATATTT
CACATGAGATAGAACATTATATTTTTAAATATTCCAAGGGATACATCCGG
TGTCAAGTTTGAGAATCGTGTTGGCATCCGAAGAGAACCTCTTGCAACCT
TTGCTAAGATTACAAATAACAGTAGGTCCTAGAGTTGCGGATTCATGCCT
GGCCATGAAGAGGATAATTGGATTTTTGACATTGTGAATTCCATCTGACC
ACACAAGTGACGAGGAAAGCACAATTTGACATAATCCTATTGTTCCAAAT
GCGGTGACGACAAAGTGATTGTGTCTCTTGTGATGATTTGAATAAGAGAA
AATTTGGCTCCACTGTAAATCTTGACATTTGGAATTGGAGCGATAACATC
CTTGTAAGTTGCGTTGTGTGAGCCGACATTTGTAGTTGTTTCAGGAAGCT
TGACATTGAAGGG
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