GT621239

EST Overview


Name	GT621239
Unique Name	GT621239
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	756

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT621239 vs. TrEMBL
Match: Q2PEP5_TRIPR (Putative WD-40 repeat protein (Fragment) OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 8.881e-124
Identity = 214/251 (85.26%), Postives = 223/251 (88.84%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEEE 754
            APEP RRFIPSKWEAKKVVQYVRAIR G ITFDKPKE D  +LLWEDDSGLTEKANHLAY+PAPKQKLPGHDESYNPPLEYIPTQEEINSYQLM+EEDRPKFIPK F SMRSIPAYENAMKE+FERCLDLYLCPR+R+KRLNID                YPITCYIE+KGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWE+GEAV+CV WNPL DIHILAVS GQDVLLLNT LGDEEE
Sbjct:  232 APEPKRRFIPSKWEAKKVVQYVRAIRNGSITFDKPKEEDDAYLLWEDDSGLTEKANHLAYVPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMYEEDRPKFIPKRFTSMRSIPAYENAMKESFERCLDLYLCPRVRRKRLNIDPESLKPKLPNKKELKPYPITCYIEYKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEIGEAVNCVTWNPLPDIHILAVSVGQDVLLLNTGLGDEEE 482

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BLAST of GT621239 vs. TrEMBL
Match: D7T592_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_227.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004116001 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.145e-105
Identity = 185/252 (73.41%), Postives = 209/252 (82.94%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANH-LAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEEE 754
            APEP RRFIPSKWE+KKVV+YVRAIRKGLI FDKPKE    + LW DDS  TEKA H LAYIPAPK KLPGH+ESYNP LEYIPTQEEINSYQLM+EEDRPKFIP+ F S+RS+PAYENA+KE+F+RCLDLYLCPR RKKR+NID                YP+TCY+E+KGH+GAV SI+ EASGQW+ASGS DG+VRVWEVETGRC R WE+GEAV  VAWNPL  +HILAVS+GQDVLLLNT LG++EE
Sbjct:  212 APEPKRRFIPSKWESKKVVEYVRAIRKGLIKFDKPKEEPRVYHLWGDDSSSTEKAGHGLAYIPAPKSKLPGHEESYNPSLEYIPTQEEINSYQLMYEEDRPKFIPRRFLSLRSVPAYENAVKESFDRCLDLYLCPRARKKRINIDPESLKPKLPSRKDLKPYPVTCYLEYKGHKGAVMSIATEASGQWIASGSIDGSVRVWEVETGRCRRVWEIGEAVHYVAWNPLPGLHILAVSSGQDVLLLNTGLGNDEE 463

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BLAST of GT621239 vs. TrEMBL
Match: B9SSN3_RICCO (Ribosome biogenesis protein bop1, putative OS=Ricinus communis GN=RCOM_1374490 PE=4 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 5.985e-104
Identity = 182/248 (73.39%), Postives = 202/248 (81.45%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGD 745
            APEP RRF PSKWEAKKVV+YVRAIRKGLI FDKPKE     LLW DDSG  EK  HL+YIPAPK KLPGH+ESYNP LE+IPTQEEINSYQLM EEDRPKFIPK F S+RSIPAYENAM EAFERCLDLYLCPR+RKKR+NID                YP TCYIE++GH GAV SIS EASG W+ASGS+DGTVR+WEVETGRCLR WE+GEAV CVAWNPL ++ ILA++ GQDV++LNT LG+
Sbjct:  225 APEPKRRFTPSKWEAKKVVKYVRAIRKGLIKFDKPKEEPRFHLLWGDDSGSAEKTGHLSYIPAPKPKLPGHEESYNPSLEFIPTQEEINSYQLMDEEDRPKFIPKRFTSLRSIPAYENAMNEAFERCLDLYLCPRVRKKRINIDPESLKPKLPSRKDLRPYPATCYIEYRGHTGAVMSISTEASGAWIASGSNDGTVRIWEVETGRCLRIWELGEAVQCVAWNPLHELPILAIAVGQDVIVLNTGLGN 472

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BLAST of GT621239 vs. TrEMBL
Match: Q5DMX4_CUCME (WD40 OS=Cucumis melo GN=WD40 PE=4 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.992e-99
Identity = 176/250 (70.40%), Postives = 199/250 (79.60%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRFI SKWEAKKVV+ VRAIR G I FDKPKE    + LW D+S  TEK +HL+YIPAPK KLPGHDESYNP LEYIPTQEEINSYQLM+EEDRPKFIP+ F SMRS+PAY+NA+K+AFERCLDLYLCPR+RKKR+NID                YP TCY+EF+GH+ AV SIS EA+GQW+ASGS DGTVR+WEVETGRCL+ WE+GE V  VAWNP  D+ ILA +AG DVLLLNT LGD E
Sbjct:  219 APEPKRRFIRSKWEAKKVVRLVRAIRNGHIKFDKPKEEQQFYDLWGDESSTTEKTSHLSYIPAPKPKLPGHDESYNPSLEYIPTQEEINSYQLMYEEDRPKFIPRRFTSMRSVPAYDNALKDAFERCLDLYLCPRVRKKRINIDPESLKPKLPNRKDLRPYPTTCYLEFRGHKDAVMSISTEANGQWIASGSLDGTVRIWEVETGRCLKVWELGEPVKYVAWNPKPDLPILAAAAGVDVLLLNTGLGDGE 468

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BLAST of GT621239 vs. TrEMBL
Match: D7LF32_ARALY (Transducin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483090 PE=4 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.436e-97
Identity = 167/251 (66.53%), Postives = 201/251 (80.08%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEEE 754
            APEP RRFIPSKWEAKKV++ VRAIRKGLI FDKP+E    +LLW DDS   +K+ HL YIP PK KLPGHDESYNP LEYIPT+EE  SY+LM+EEDRPKFIPK F S+RSIPAYENA+KE+FERCLDLYLCPR+RKKR+NID                YP +CY+E+KGH GAVT+IS ++SG+W+ASGS+DG+VR+WEVETGRCL+ W+  EA+ CVAWNPLS + +LAV+ G+D+  LNT LG +EE
Sbjct:  255 APEPKRRFIPSKWEAKKVLKLVRAIRKGLIKFDKPEEEPNVYLLWGDDSTSDQKSKHLTYIPPPKLKLPGHDESYNPSLEYIPTEEEKASYELMYEEDRPKFIPKRFTSLRSIPAYENALKESFERCLDLYLCPRVRKKRINIDPESLKPKLPSRKDLRPYPNSCYLEYKGHTGAVTTISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSRLPVLAVAMGRDLFFLNTELGTDEE 505

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BLAST of GT621239 vs. TrEMBL
Match: Q9SIY9_ARATH (Putative WD-40 repeat protein OS=Arabidopsis thaliana GN=At2g40360 PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 5.426e-97
Identity = 168/251 (66.93%), Postives = 199/251 (79.28%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEEE 754
            APEP RRFIPSKWEAKKVV+ VRAIRKG I FDKP+E    +LLW DDS   +K+ HL YIP PK KLPGHDESYNP LEYIPT+EE  SY+LMFEEDRPKFIP  F S+RSIPAYENA+KE+FERCLDLYLCPR+RKKR+NID                YP +CY+E+KGH GAVTSIS ++SG+W+ASGS+DG+VR+WEVETGRCL+ W+  EA+ CVAWNPLS + +LAV+ G+D+  LNT LG +EE
Sbjct:  273 APEPKRRFIPSKWEAKKVVKIVRAIRKGWIKFDKPEEEPNVYLLWGDDSTSDQKSKHLTYIPPPKLKLPGHDESYNPSLEYIPTEEEKASYELMFEEDRPKFIPTRFTSLRSIPAYENALKESFERCLDLYLCPRVRKKRINIDPESLKPKLPSRKDLRPYPNSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSRLPVLAVAMGRDLFFLNTELGTDEE 523

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BLAST of GT621239 vs. TrEMBL
Match: B8B5N0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25805 PE=4 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.294e-90
Identity = 160/251 (63.75%), Postives = 189/251 (75.30%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTE-KANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PSKWE KKVV+ VRAIRKG I FDKPKE    +LLW D++   + K   L+YIPAPK  LPGH+ESYNP +EYIPTQEEI+SYQLM+EEDRPKFIP+ F  +RS+PAYE A++E F+RCLDLYLCPR RKKR+NID                YP TCY+EFKGH G V S+SVEA+GQW+ASGSSDGT+RVWEVETGRC++ W VG  V  +AWNP  D HILA     D+LLLN  +GDE+
Sbjct:  172 APEPKRRFVPSKWEQKKVVKLVRAIRKGWIKFDKPKEEPNFYLLWGDETDTADNKRQGLSYIPAPKPNLPGHEESYNPSVEYIPTQEEIDSYQLMYEEDRPKFIPRKFDCLRSVPAYEKALREGFDRCLDLYLCPRTRKKRINIDPESLKPKLPSKKDLRPYPRTCYLEFKGHNGPVKSLSVEATGQWIASGSSDGTIRVWEVETGRCIKVWNVGGVVHRIAWNPSPDRHILAAVVDHDLLLLNAEVGDED 422

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BLAST of GT621239 vs. TrEMBL
Match: Q6Z3V6_ORYSJ (Putative transducin / WD-40 repeat protein OS=Oryza sativa subsp. japonica GN=P0673E01.26 PE=4 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.884e-90
Identity = 159/251 (63.35%), Postives = 189/251 (75.30%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTE-KANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PS+WE KKVV+ VRAIRKG I FDKPKE    +LLW D++   + K   L+YIPAPK  LPGH+ESYNP +EYIPTQEEI+SYQLM+EEDRPKFIP+ F  +RS+PAYE A++E F+RCLDLYLCPR RKKR+NID                YP TCY+EFKGH G V S+SVEA+GQW+ASGSSDGT+RVWEVETGRC++ W VG  V  +AWNP  D HILA     D+LLLN  +GDE+
Sbjct:  172 APEPKRRFVPSRWEQKKVVKLVRAIRKGWIKFDKPKEEPNFYLLWGDETDTADNKRQGLSYIPAPKPNLPGHEESYNPSVEYIPTQEEIDSYQLMYEEDRPKFIPRKFDCLRSVPAYEKALREGFDRCLDLYLCPRTRKKRINIDPESLKPKLPSKKDLRPYPRTCYLEFKGHNGPVKSLSVEATGQWIASGSSDGTIRVWEVETGRCIKVWNVGGVVHRIAWNPSPDRHILAAVVDHDLLLLNAEVGDED 422

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BLAST of GT621239 vs. TrEMBL
Match: Q0D6V7_ORYSJ (Os07g0435400 protein OS=Oryza sativa subsp. japonica GN=Os07g0435400 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.884e-90
Identity = 159/251 (63.35%), Postives = 189/251 (75.30%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTE-KANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PS+WE KKVV+ VRAIRKG I FDKPKE    +LLW D++   + K   L+YIPAPK  LPGH+ESYNP +EYIPTQEEI+SYQLM+EEDRPKFIP+ F  +RS+PAYE A++E F+RCLDLYLCPR RKKR+NID                YP TCY+EFKGH G V S+SVEA+GQW+ASGSSDGT+RVWEVETGRC++ W VG  V  +AWNP  D HILA     D+LLLN  +GDE+
Sbjct:  172 APEPKRRFVPSRWEQKKVVKLVRAIRKGWIKFDKPKEEPNFYLLWGDETDTADNKRQGLSYIPAPKPNLPGHEESYNPSVEYIPTQEEIDSYQLMYEEDRPKFIPRKFDCLRSVPAYEKALREGFDRCLDLYLCPRTRKKRINIDPESLKPKLPSKKDLRPYPRTCYLEFKGHNGPVKSLSVEATGQWIASGSSDGTIRVWEVETGRCIKVWNVGGVVHRIAWNPSPDRHILAAVVDHDLLLLNAEVGDED 422

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BLAST of GT621239 vs. TrEMBL
Match: C5XJT9_SORBI (Putative uncharacterized protein Sb03g013640 OS=Sorghum bicolor GN=Sb03g013640 PE=4 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.869e-89
Identity = 160/251 (63.75%), Postives = 185/251 (73.71%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANH-LAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PSKWE KKVV+ VRAIR G I FDKPKE    +LLW D++   +   H L+YIP PK KLPGH+ESYNP +EYIPTQEEI+SYQLM+EEDRPKFIPK F S+RS+PAYE A++E F+RCLDLYLCPR RKKR+NID                YP TCY+EFKGH   V SISVE SGQW+ASGS DGT+RVWEVETGRCL+ W VG  V  +AWNP  D  ILA   G D+LL+N  +G EE
Sbjct:  175 APEPKRRFVPSKWEQKKVVKLVRAIRNGWIKFDKPKEERNLYLLWGDEADTADNKRHGLSYIPPPKPKLPGHEESYNPSIEYIPTQEEIDSYQLMYEEDRPKFIPKRFESLRSVPAYEKALREGFDRCLDLYLCPRTRKKRINIDPESLKPKLPSKKDLRPYPKTCYLEFKGHTSPVKSISVEISGQWLASGSCDGTIRVWEVETGRCLKVWNVGGDVRHIAWNPSPDRPILAAVVGHDLLLINAEVGSEE 425

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BLAST of GT621239 vs. SwissProt
Match: BOP1_CHLRE (Ribosome biogenesis protein BOP1 homolog OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_111274 PE=3 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 2.206e-63
Identity = 126/262 (48.09%), Postives = 173/262 (66.03%), Query Frame = 2

Query:    5 PEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKE----ADGP--FLLWEDDSGLTEKA-----NHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNI-DXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEA-SGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            PEP  RF+PSKWE +K+V+ VRAIRKG I     +E    A GP  +LLW DD GLT++A     + L YIPAPK +LPGH +SYNPP EY+PT+EE+ ++Q+   EDRPK +P++F S+R++PAY + +KE FERCLDLYLCPR+R+KRL+I                  +P T  + ++GH G V SI+ +  +GQW+ SG  DGT+R+WEV TGRC R W +   VS VAW P + + +++ + G  V+LL +  G EE
Sbjct:  282 PEPKSRFVPSKWEEQKIVKLVRAIRKGWIKKTPEQEEEERAAGPPAYLLWADD-GLTDEAAAKAGSGLTYIPAPKLQLPGHADSYNPPAEYLPTEEEVAAWQMADPEDRPKALPQAFTSLRAVPAYTDFIKERFERCLDLYLCPRVRRKRLDIKSPEQLVPQLPKPRDLQPFPTTLALAYEGHMGPVASIAPDPWTGQWLLSGGQDGTLRLWEVRTGRCWRTWVLEGPVSAVAWCPQAGLRLVSAAVGNCVVLLPSGTGPEE 542

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BLAST of GT621239 vs. SwissProt
Match: ERB1_ASPFU (Ribosome biogenesis protein erb1 OS=Aspergillus fumigatus GN=erb1 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.927e-55
Identity = 114/253 (45.06%), Postives = 159/253 (62.85%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKG-LITFDKPKEADGP------FLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPK-FIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEV----GEAVSCVAWNPLSDIHILAVSAGQDVLL 724
            APEP RRF+PSK EAK+V++ V+AIR+G ++ F  P E D        + LW D++   E+ +H  +IPAPK   PG++ESY+PP EY+P+++E  +++    EDR + F+P  F S+R +P YEN +KE FERCLDLYL PR+R+ +LNID                +P  C   F+GH+G V +++V+ SG W+ASG  DGTVRVWE+ TGR L  W V     + V+ V W P  D  ILA +AG D+ L
Sbjct:  258 APEPKRRFVPSKHEAKRVMKIVKAIREGRILPFKPPTEEDEEDDTIVKYDLWADEA---ERKDHPMHIPAPKLPPPGYEESYHPPPEYLPSRKERKTWEEADPEDRDREFLPNDFGSLRRVPGYENFVKEKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPFPTACATVFRGHKGRVRTLAVDPSGLWLASGGDDGTVRVWELLTGRQL--WSVKLSEEDPVNVVRWRPGKDALILAAAAGDDIFL 505

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BLAST of GT621239 vs. SwissProt
Match: ERB1_ASPFC (Ribosome biogenesis protein erb1 OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=erb1 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.927e-55
Identity = 114/253 (45.06%), Postives = 159/253 (62.85%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKG-LITFDKPKEADGP------FLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPK-FIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEV----GEAVSCVAWNPLSDIHILAVSAGQDVLL 724
            APEP RRF+PSK EAK+V++ V+AIR+G ++ F  P E D        + LW D++   E+ +H  +IPAPK   PG++ESY+PP EY+P+++E  +++    EDR + F+P  F S+R +P YEN +KE FERCLDLYL PR+R+ +LNID                +P  C   F+GH+G V +++V+ SG W+ASG  DGTVRVWE+ TGR L  W V     + V+ V W P  D  ILA +AG D+ L
Sbjct:  259 APEPKRRFVPSKHEAKRVMKIVKAIREGRILPFKPPTEEDEEDDTIVKYDLWADEA---ERKDHPMHIPAPKLPPPGYEESYHPPPEYLPSRKERKTWEEADPEDRDREFLPNDFGSLRRVPGYENFVKEKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPFPTACATVFRGHKGRVRTLAVDPSGLWLASGGDDGTVRVWELLTGRQL--WSVKLSEEDPVNVVRWRPGKDALILAAAAGDDIFL 506

[Close]

BLAST of GT621239 vs. SwissProt
Match: ERB1_EMENI (Ribosome biogenesis protein erb1 OS=Emericella nidulans GN=erb1 PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 6.435e-55
Identity = 113/260 (43.46%), Postives = 162/260 (62.31%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGP-------FLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPK-FIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVG--EAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PSK EAK+V++ V+AIR+G I   KP+  +         + LW D++   E+ +H  ++PAPK   PG++ESY+PP EY+P ++E  +++    EDR + F+P+ F S+R +P YEN +KE FERCLDLYL PR+R+ +LNID                +P  C   F+GH+G V S++V+ +G W+A+G  DGTVRVWE+ TGR L   ++G  E V+ V W P  D  ILA +AG D+ L    + D E
Sbjct:  256 APEPKRRFVPSKHEAKRVMKIVKAIREGRILPFKPQTQEDEEDKDVIKYDLWADEA---ERPDHPMHVPAPKLPPPGYEESYHPPPEYLPDKKERKAWEDADPEDREREFLPQDFGSLRRVPGYENFVKEKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPFPTACAAVFRGHKGRVRSLAVDPTGIWLATGGDDGTVRVWELITGRQLWSVKLGEDEPVNVVRWRPGKDAVILAAAAGDDIFLAVPPIADPE 512

[Close]

BLAST of GT621239 vs. SwissProt
Match: ERB1_ASPCL (Ribosome biogenesis protein erb1 OS=Aspergillus clavatus GN=erb1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.433e-54
Identity = 115/262 (43.89%), Postives = 161/262 (61.45%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKG-LITFDKPKEADGP------FLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPK-FIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEV----GEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PSK EAK+V++ V+AIR+G ++ F  P E D        + LW D++   E+ +H+ +IPAPK   PG++ESY+PP EY+P ++E  +++    EDR + F+P  F S+R +P YEN +KE FERCLDLYL PR+R+ +LNID                +P  C   F+GH+G V S++V+ SG W+A+   DGTVRVWE+ TGR L  W V     + V+ V W P  D  ILA +AG D+ L    + D E
Sbjct:  251 APEPKRRFVPSKHEAKRVMKIVKAIREGRILPFKPPTEEDKEEDNVINYDLWADEA---ERPDHIMHIPAPKLPPPGYEESYHPPPEYLPDKKERKAWEEADPEDREQEFLPNDFGSLRRVPGYENFVKEKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPFPTACATVFRGHKGRVRSLAVDPSGLWLATAGDDGTVRVWELLTGRQL--WSVKLSEEDPVNVVRWRPGKDALILAAAAGDDIYLAVPPIVDPE 507

[Close]

BLAST of GT621239 vs. SwissProt
Match: ERB1_ASPTN (Ribosome biogenesis protein erb1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=erb1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.445e-54
Identity = 112/261 (42.91%), Postives = 161/261 (61.69%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKG-LITFDKPKEADGP-----FLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPK-FIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEV----GEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PSK EAK+V++ V+AI++G ++ +  P E D       + LW D++   E+ +H  ++PAPK   PG++ESY+PP EY+P ++E  +++    EDR + F+P  F S+R +P YEN +KE FERCLDLYL PR+R+ +LNID                +P TC   F+GH+G V ++SV+ SG W+A+G  DGT+RVWE+ TGR L  W V     +AV+ V W P  D  +LA   G D+ L    + D E
Sbjct:  248 APEPKRRFVPSKHEAKRVMKIVKAIKEGRILPYKPPTEEDEDKDVINYDLWADEA---ERPDHPMHVPAPKLPPPGYEESYHPPPEYLPDKKERKAWEETDPEDREQEFLPNDFGSLRKVPGYENFVKEKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPFPTTCATVFRGHKGRVRTVSVDPSGVWLATGGDDGTLRVWELLTGRQL--WTVKLSDEDAVNVVRWRPGKDAVVLAAGVGDDIFLAVPPIVDPE 503

[Close]

BLAST of GT621239 vs. SwissProt
Match: BOP1_DANRE (Ribosome biogenesis protein bop1 OS=Danio rerio GN=bop1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.445e-54
Identity = 113/249 (45.38%), Postives = 149/249 (59.84%), Query Frame = 2

Query:    5 PEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFL-LWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRP-KFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGD 745
            P+  R FIPS  E +KV + V AI+ G I   +PKE    +  LW  +   +    H  ++PAPK KLPGH+ESYNPP EY+ ++EE  ++     EDR   F+P+ F+ +R++PA+   + E FERCLDLYLCPR RK R+N++                +P T  + ++GH   V SISV  SGQW+ SGS D TVR WEV T RCL+  +VG AV  VAWNP   I ++AVS    VLLLN  LGD
Sbjct:  270 PQDKRSFIPSLIEKEKVGKLVHAIKMGWIKPRRPKETTPQYYDLWAKEDPNSILGRHKMHVPAPKMKLPGHEESYNPPPEYLLSEEERLAWAAQDPEDRKLSFLPQKFSCLRAVPAFSRFIHERFERCLDLYLCPRQRKMRVNVNPEDLIPKLPKPKDLQPFPTTQSLVYRGHSSLVRSISVSPSGQWLVSGSDDCTVRFWEVSTARCLKTVQVGGAVKGVAWNPNPSICLVAVSYEDSVLLLNPALGD 518

[Close]

BLAST of GT621239 vs. SwissProt
Match: ERB1_ASPNC (Ribosome biogenesis protein erb1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=erb1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.447e-54
Identity = 114/260 (43.85%), Postives = 160/260 (61.54%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKP----KEADGPFL---LWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPK-FIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGE--AVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEE 751
            APEP RRF+PSK EAK+V++ V+AIR+G I   KP    KE D   +   LW D++   E+ +H  ++PAPK   PG++ESY+PP EY+P  +E  ++Q    EDR + ++P  F S+R +P Y   +KE FERCLDLYL PR+R+ +LNID                +P  C   F+GH+G V S++V+ +G W+A+G  DGTVRVWE+ TGR L   +VGE   V+ V W P  D  +LA +AG D+ L+   + D E
Sbjct:  251 APEPKRRFVPSKHEAKRVMKIVKAIREGRILPYKPPSEEKEEDLELINYDLWADEA---ERPDHPMHVPAPKLPPPGYEESYHPPPEYLPDNKERKAWQEADPEDREREYLPTDFGSLRKVPGYGEFVKEKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPFPSVCATVFRGHKGRVRSLAVDPTGVWLATGGDDGTVRVWELLTGRQLYSVKVGEEDPVNVVRWRPSKDAVVLAAAAGDDIYLIVPPILDPE 507

[Close]

BLAST of GT621239 vs. SwissProt
Match: BOP1_MONBE (Ribosome biogenesis protein BOP1 homolog OS=Monosiga brevicollis GN=37129 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.114e-54
Identity = 111/255 (43.53%), Postives = 154/255 (60.39%), Query Frame = 2

Query:    5 PEPIRRFIPSKWEAKKVVQYVRAIRKGLITF-------DKPKEADGPFLLW--EDDSG----LTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPK-FIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLL 727
            PEP RRF+PSKWE KK+++ VR+IRKGLI         DK  E +  + +W  EDD         +ANH+A   APK  LP H ESYNPP EY+PT  E   ++   E+DR + ++P  + S+R +PAY+  ++E F RCLDLYLCPR R+ R+N+D                +P    + ++GH+  VTSIS + +GQW+ SGS D T+RVWE+ TGRC+R   V   V+ VAW P + + I+AV+ G  V L+
Sbjct:  277 PEPKRRFVPSKWEHKKIMKIVRSIRKGLIKLPTSDDEKDKSSEEEQYYDVWGNEDDPNDPRIKVRQANHIA---APKVALPHHAESYNPPEEYLPTDAEAEKWRNAHEDDRERNYLPHKYGSLRLVPAYDQYIQERFHRCLDLYLCPRARRIRMNVDPEDLLPKLPKPEDLQPFPSAPSLVYRGHKARVTSISCDPTGQWLVSGSDDKTIRVWEISTGRCVRVVTVDAEVNMVAWCPNAGVSIVAVAHGHTVSLI 528

[Close]

BLAST of GT621239 vs. SwissProt
Match: ERB1_NEOFI (Ribosome biogenesis protein ERB1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=erb1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.585e-53
Identity = 113/253 (44.66%), Postives = 158/253 (62.45%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKG-LITFDKPKEADGP------FLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRP-KFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEV----GEAVSCVAWNPLSDIHILAVSAGQDVLL 724
            APEP RRF+PSK EAK+V++ V+AIR+G ++ F  P E D        + LW D++   E+ +H  +IPAPK   PG++ESY+PP EY+P+Q+E  +++    EDR  +F+P  F S+R +P YEN +KE FERCLDLYL PR+R+ +LNID                +P  C   F+GH+G V +++V+ SG  +A+G  DGTVRVWE+ TGR L  W V     + V+ V W P  D  ILA +AG D+ L
Sbjct:  253 APEPKRRFVPSKHEAKRVMKIVKAIREGRILPFKPPTEEDEEDDTIIKYDLWADEA---ERKDHPMHIPAPKLPPPGYEESYHPPPEYLPSQKERKAWEEADPEDRASEFLPNDFGSLRRVPGYENFVKEKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPFPTACATVFRGHKGRVRTLAVDPSGLLLATGGDDGTVRVWELLTGRQL--WSVKLSEEDPVNVVRWRPGKDALILAAAAGDDIFL 500

[Close]

BLAST of GT621239 vs. TAIR peptide
Match: AT2G40360.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:16853123-16856635 REVERSE LENGTH=753)

HSP 1 Score: 357.836 bits (917), Expect = 3.573e-99
Identity = 168/251 (66.93%), Postives = 199/251 (79.28%), Query Frame = 2

Query:    2 APEPIRRFIPSKWEAKKVVQYVRAIRKGLITFDKPKEADGPFLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKSFASMRSIPAYENAMKEAFERCLDLYLCPRIRKKRLNIDXXXXXXXXXXXXXXXXYPITCYIEFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVSAGQDVLLLNTCLGDEEE 754
            APEP RRFIPSKWEAKKVV+ VRAIRKG I FDKP+E    +LLW DDS   +K+ HL YIP PK KLPGHDESYNP LEYIPT+EE  SY+LMFEEDRPKFIP  F S+RSIPAYENA+KE+FERCLDLYLCPR+RKKR+NID                YP +CY+E+KGH GAVTSIS ++SG+W+ASGS+DG+VR+WEVETGRCL+ W+  EA+ CVAWNPLS + +LAV+ G+D+  LNT LG +EE
Sbjct:  251 APEPKRRFIPSKWEAKKVVKIVRAIRKGWIKFDKPEEEPNVYLLWGDDSTSDQKSKHLTYIPPPKLKLPGHDESYNPSLEYIPTEEEKASYELMFEEDRPKFIPTRFTSLRSIPAYENALKESFERCLDLYLCPRVRKKRINIDPESLKPKLPSRKDLRPYPNSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSRLPVLAVAMGRDLFFLNTELGTDEE 501

[Close]

BLAST of GT621239 vs. TAIR peptide
Match: AT1G64610.2 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:23998920-24001297 REVERSE LENGTH=647)

HSP 1 Score: 53.5286 bits (127), Expect = 1.441e-7
Identity = 27/67 (40.30%), Postives = 39/67 (58.21%), Query Frame = 2

Query:  503 EFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVS 703
            EFKGH G +  +S    G ++ S S D TVR+W V    CLR +     V+CVA+NP+ D + ++ S
Sbjct:  317 EFKGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGS 382

[Close]

BLAST of GT621239 vs. TAIR peptide
Match: AT1G64610.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:23998920-24001297 REVERSE LENGTH=647)

HSP 1 Score: 53.5286 bits (127), Expect = 1.441e-7
Identity = 27/67 (40.30%), Postives = 39/67 (58.21%), Query Frame = 2

Query:  503 EFKGHEGAVTSISVEASGQWMASGSSDGTVRVWEVETGRCLRRWEVGEAVSCVAWNPLSDIHILAVS 703
            EFKGH G +  +S    G ++ S S D TVR+W V    CLR +     V+CVA+NP+ D + ++ S
Sbjct:  317 EFKGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGS 382

The following BLAST results are available for this feature:

BLAST of GT621239 vs. TrEMBL
BLAST of GT621239 vs. SwissProt
BLAST of GT621239 vs. TAIR peptide

BLAST of GT621239 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2PEP5_TRIPR	8.881e-124	85.26	Putative WD-40 repeat protein (Fragment) OS=Trifol...	[more]
D7T592_VITVI	4.145e-105	73.41	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SSN3_RICCO	5.985e-104	73.39	Ribosome biogenesis protein bop1, putative OS=Rici...	[more]
Q5DMX4_CUCME	1.992e-99	70.40	WD40 OS=Cucumis melo GN=WD40 PE=4 SV=1	[more]
D7LF32_ARALY	2.436e-97	66.53	Transducin family protein OS=Arabidopsis lyrata su...	[more]
Q9SIY9_ARATH	5.426e-97	66.93	Putative WD-40 repeat protein OS=Arabidopsis thali...	[more]
B8B5N0_ORYSI	1.294e-90	63.75	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q6Z3V6_ORYSJ	2.884e-90	63.35	Putative transducin / WD-40 repeat protein OS=Oryz...	[more]
Q0D6V7_ORYSJ	2.884e-90	63.35	Os07g0435400 protein OS=Oryza sativa subsp. japoni...	[more]
C5XJT9_SORBI	1.869e-89	63.75	Putative uncharacterized protein Sb03g013640 OS=So...	[more]

BLAST of GT621239 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
BOP1_CHLRE	2.206e-63	48.09	Ribosome biogenesis protein BOP1 homolog OS=Chlamy...	[more]
ERB1_ASPFU	4.927e-55	45.06	Ribosome biogenesis protein erb1 OS=Aspergillus fu...	[more]
ERB1_ASPFC	4.927e-55	45.06	Ribosome biogenesis protein erb1 OS=Aspergillus fu...	[more]
ERB1_EMENI	6.435e-55	43.46	Ribosome biogenesis protein erb1 OS=Emericella nid...	[more]
ERB1_ASPCL	1.433e-54	43.89	Ribosome biogenesis protein erb1 OS=Aspergillus cl...	[more]
ERB1_ASPTN	2.445e-54	42.91	Ribosome biogenesis protein erb1 OS=Aspergillus te...	[more]
BOP1_DANRE	2.445e-54	45.38	Ribosome biogenesis protein bop1 OS=Danio rerio GN...	[more]
ERB1_ASPNC	5.447e-54	43.85	Ribosome biogenesis protein erb1 OS=Aspergillus ni...	[more]
BOP1_MONBE	7.114e-54	43.53	Ribosome biogenesis protein BOP1 homolog OS=Monosi...	[more]
ERB1_NEOFI	1.585e-53	44.66	Ribosome biogenesis protein ERB1 OS=Neosartorya fi...	[more]

BLAST of GT621239 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G40360.1	3.573e-99	66.93	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT1G64610.2	1.441e-7	40.30	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]
AT1G64610.1	1.441e-7	40.30	\| Symbols: \| Transducin/WD40 repeat-like superfam...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	no description	coord: 162..201 score: 2e-09coord: 204..243 score:
IPR011046	WD40 repeat-like-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 121..244 score: 1.8
IPR012953	BOP1, N-terminal	PFAM	PF08145	BOP1NT	coord: 1..162 score: 9.8
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10	no description	coord: 138..244 score: 7.2
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 169..210 score: 15
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 188..202 score
IPR019781	WD40 repeat, subgroup	PFAM	PF00400	WD40	coord: 164..201 score: 2.4
IPR019782	WD40 repeat 2	PROFILE	PS50082	WD_REPEATS_2	coord: 169..210 score: 17
None	No IPR available	PANTHER	PTHR17605	RIBOSOME BIOGENESIS PROTEIN BOP1 (BLOCK OF PROLIFERATION 1 PROTEIN)	coord: 1..247 score: 5e
None	No IPR available	SEG	seg	seg	coord: 145..160 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT621239 ID=GT621239; Name=GT621239; organism=Lens culinaris; type=EST; length=756bp
CGCACCAGAACCCATACGAAGGTTTATTCCTTCAAAGTGGGAAGCTAAGA
AGGTTGTCCAATATGTTAGAGCAATCCGCAAGGGATTAATAACTTTTGAC
AAGCCAAAGGAGGCTGATGGTCCATTTCTCTTGTGGGAAGATGATTCTGG
TTTGACCGAAAAAGCAAATCATTTGGCATACATTCCTGCACCGAAGCAGA
AGTTACCTGGCCATGATGAGTCATATAATCCTCCTTTAGAGTATATTCCA
ACCCAAGAAGAGATTAACTCATATCAGTTGATGTTTGAAGAAGACCGCCC
TAAGTTTATTCCAAAAAGCTTTGCATCTATGAGAAGCATCCCTGCTTATG
AGAATGCCATGAAGGAAGCTTTTGAACGCTGTTTAGACTTGTACTTGTGC
CCCCGAATTCGAAAAAAACGTCTTAATATTGATCCTGAATCTTTAAAGCC
AAAGCTTCCAAGTAAAAAGGAGCTCAAGCCTTACCCCATTACATGCTATA
TTGAGTTTAAAGGCCATGAAGGTGCAGTGACGTCAATTTCGGTTGAAGCT
TCAGGGCAGTGGATGGCTTCAGGTTCAAGTGATGGAACTGTCCGTGTCTG
GGAGGTTGAAACAGGCAGATGTTTGAGACGGTGGGAGGTTGGTGAAGCTG
TGAGCTGTGTTGCTTGGAATCCTCTGTCTGATATTCATATTTTGGCCGTC
TCTGCGGGACAAGATGTGCTTCTTCTAAACACTTGCTTGGGTGATGAAGA
AGAACA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_rpt
IPR011046	WD40 repeat-like-containing domain
IPR012953	BOP1_N_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR019781	WD40 repeat, subgroup
IPR019782	WD40 repeat 2

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