GT621338

EST Overview
NameGT621338
Unique NameGT621338
TypeEST
OrganismLens culinaris (lentil)
Sequence length571
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology
BLAST of GT621338 vs. TrEMBL
Match: C6SXB5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.822e-18
Identity = 59/109 (54.13%), Postives = 68/109 (62.39%), Query Frame = -2
Query:   28 LLSAFSKALA*VSIRTFSSKNGTTPSFTTLAENFTAIVTTNLN----FR*HGSTIKCTGAIFTTFNENFASIRSISPSYNTCPTFSCLAQ--HIAQARA*IFILS*DFP 336
            L SAFSKALA   IR FS +N TTP FTTLAE  TA    N+     F  H   +  TGAIFTTFNENFASIR +S SY+ CPTF+ LA+   +   +A  FI   DFP
Sbjct:   18 LSSAFSKALARACIRAFSPENDTTPPFTTLAECSTATAAHNIRWQIQFLGHCFALNGTGAIFTTFNENFASIRPLSFSYDACPTFTHLAECAALGHVQAQGFICFWDFP 126          
BLAST of GT621338 vs. TrEMBL
Match: B9T2C1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0410710 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.355e-14
Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query:   70 GNVLCKTGKGWTCVITRTDGPDTGKVFVKCGENCTCTLDGGAVSPKI---EISCDNGSEVFCKCGEGWSCSIFRT 285
            G  +C+ G+G+TCVITRT GPD GK + KC  NCTC LDG A    I   ++     S  +C+CGEGWSC I +T
Sbjct:   38 GKAICRCGEGYTCVITRTVGPDAGKTY-KCTGNCTCVLDGNADEGSIVQQKLESLGESSAYCECGEGWSCVITKT 111          
BLAST of GT621338 vs. TrEMBL
Match: D7TTW4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013151001 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.688e-12
Identity = 43/120 (35.83%), Postives = 56/120 (46.67%), Query Frame = 1
Query:    4 SSSFTQDQ-GKVSAEDKNSGPRLGNVLCKTGKGWTCVITRTDGPDTGKVFVKCGENCTCTLDGGAV--SPKIEISCDNGSEVFCKCGEGWSCSIFRTEGPDADSGKGFAECTQQYNCACN 354
            ++S  QD  G VS  D     +     CK G+GW CV+T+T+ P     F KC E CTC +D      S    +         C+ GEG++C I +  GPDA  GK F EC     C  N
Sbjct:    5 TTSAGQDSFGYVSVGDDGDPSK---TFCKCGEGWACVVTKTEEPAATNAFFKCAEKCTCLIDTKTEGDSKTYALKSPGAGMAICRVGEGYTCVITKITGPDA--GKTFVECGGGCTCVIN 119          

HSP 2 Score: 62.003 bits (149), Expect = 3.294e-8
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 1
Query:   61 PRLGNVLCKTGKGWTCVITRTDGPDTGKVFVKCGENCTCTLDG 189
            P  G  +C+ G+G+TCVIT+  GPD GK FV+CG  CTC ++G
Sbjct:   78 PGAGMAICRVGEGYTCVITKITGPDAGKTFVECGGGCTCVING 120          
The following BLAST results are available for this feature:
BLAST of GT621338 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C6SXB5_SOYBN7.822e-1854.13Putative uncharacterized protein OS=Glycine max PE... [more]
B9T2C1_RICCO2.355e-1450.67Putative uncharacterized protein OS=Ricinus commun... [more]
D7TTW4_VITVI1.688e-1235.83Whole genome shotgun sequence of line PN40024, sca... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT621338 ID=GT621338; Name=GT621338; organism=Lens culinaris; type=EST; length=571bp
GAGTCCTCTAGCTTCACTCAAGACCAAGGGAAAGTCTCAGCTGAGGATAA
AAATTCAGGCCCGCGCTTGGGCAATGTGTTGTGCAAGACAGGAAAAGGTT
GGACATGTGTTATAACTAGGACTGATGGACCTGATACTGGCAAAGTTTTC
GTTAAATGTGGTGAAAATTGCACCTGTACACTTGATGGTGGAGCCGTGTC
ACCTAAAATTGAGATTAGTTGTGACAATGGCAGTGAAGTTTTCTGCAAGT
GTGGTGAAGGATGGAGTTGTTCCATTTTTAGAACTGAAGGTCCTGATGCT
GACTCAGGCAAGGGCTTTGCTGAATGCACTCAACAGTACAACTGTGCTTG
TAACTGTTGATGACCTATTGGCCCCTACTTTGCTAGTTGGTTTGTGAAAT
AATTTGTGCAAAATAAAGGGATTATCAGTAATATTATGTGTGATCTTTTA
TGAAGATTGTTTACTAAATGATTGTAATTGGTATGCGTTTGGAGAAACTC
ATCTTGTAATGCAATGCATATGCAGAAACCTAAGTTGTCTCTTTAACTAA
GATGATGCTTTTCATAGGCTC
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