GT621374

EST Overview
NameGT621374
Unique NameGT621374
TypeEST
OrganismLens culinaris (lentil)
Sequence length765
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT621374 vs. TrEMBL
Match: A5B326_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011880 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.214e-20
Identity = 45/122 (36.89%), Postives = 79/122 (64.75%), Query Frame = 2
Query:  386 SKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQK-FDIYPLWQQYVVDVTSRFGD-AFEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSLSIF 745
            +KV+FP+F+G  +  WL + + FF +D TPP + VRLA++HL+G ++QW   Y++ +  + Y  W +YV+ + +RFG   F+DP++ L  ++ TG +Q Y+D+F+    +  +   H+LS F
Sbjct:  127 TKVDFPKFNGCGLDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNEAYLDWSEYVIALNARFGQHVFDDPIADLRNLRQTGSLQSYMDEFDELYPRADIKESHALSFF 248          
BLAST of GT621374 vs. TrEMBL
Match: A5AJD0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012031 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.214e-20
Identity = 45/122 (36.89%), Postives = 79/122 (64.75%), Query Frame = 2
Query:  386 SKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQK-FDIYPLWQQYVVDVTSRFGD-AFEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSLSIF 745
            +KV+FP+F+G  +  WL + + FF +D TPP + VRLA++HL+G ++QW   Y++ +  + Y  W +YV+ + +RFG   F+DP++ L  ++ TG +Q Y+D+F+    +  +   H+LS F
Sbjct:   75 TKVDFPKFNGGGLDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNEAYLDWSEYVIALNARFGQHVFBDPIADLRNLRQTGSLQSYMDEFDELYPRADIKESHALSFF 196          
BLAST of GT621374 vs. TrEMBL
Match: B9SNM0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1758780 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.388e-20
Identity = 66/235 (28.09%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  152 KSTVAATRSQTLADLEKKMDER-HDTLQARLEQLNIQVGTIMEEIRTMLQAQSTHSVNGSPRDDTLVRNNPITNYS-----------------------------------TRISKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQKFDIYPLWQQYVVDVTSRFGD-AFEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSLSIF 745
            + ++ A  ++ L +  KK +E   + +  + E +  Q  TI+ E++ +L +        +P + T++ N P  N S                                   TR +K+E P F+G+++  WL+KC++FF +D T   + ++LASIH++G +    LN + +     P W++YV+ +  RFG+ A+EDP++ L  +  TG +QEY++ FE+   +VTL  ++SLS F
Sbjct:   16 EESLKAMVTEILTENNKKQEEMVTEMINKQSELMGQQQNTIVNELKALLLSSHPAPTFPTPINPTVLPNPPFINLSSSQTIPTAIPTPTYIDLSQPTIHTQAAIGNGYQMATRFTKIESPTFNGEDLEGWLFKCERFFQIDYTLLMARMKLASIHMEGRA----LNKLGE-----PPWEEYVLALKGRFGEKAYEDPMADLKGLIQTGTLQEYMESFEVLSHKVTLSEDYSLSCF 241          
BLAST of GT621374 vs. TrEMBL
Match: B9SUW3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0251410 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.731e-19
Identity = 54/180 (30.00%), Postives = 100/180 (55.56%), Query Frame = 2
Query:  173 RSQTLADLEKKMDERHDTLQARLEQLNIQVGTIMEEIRTMLQAQSTHSV-NGSPRDDTLVRNNPITNY--STRISKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQKFDI-YPLWQQYVVDVTSRFG-DAFEDPLSTLLQIKHTGKVQEYIDQFEL 697
            + Q + DL KK ++   ++   + ++     +       +  + S++   N +   D + +    TNY  ++R +KVEFPRF G++V  WL+K D+FF +D TP  S V+LA IHL+G +LQW   +++ + ++  P W  YV  +  RF    ++DP++ L  +   G V +Y+++F++
Sbjct:   41 QDQAITDLSKKHNQ---SMTLMMNEIRALTNSRQPSNNILSPSNSSYGFPNHASTADYMQQGTGNTNYHLASRFTKVEFPRFGGEDVEGWLFKYDRFFQIDQTPSNSQVKLALIHLEGRALQWHQTFIKNRGELGEPPWNDYVRAIKCRFRVRTYKDPMADLKMLVQIGSVSDYLEEFDV 217          
BLAST of GT621374 vs. TrEMBL
Match: Q9SX87_ARATH (F16N3.16 OS=Arabidopsis thaliana GN=F16N3.16 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.659e-19
Identity = 62/194 (31.96%), Postives = 97/194 (50.00%), Query Frame = 2
Query:  194 LEKKMDERHDTLQARLEQLNIQVGTIMEEIRT------MLQAQSTHSVNGSPRDDTLVRNNPITNYS--TRISKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQKFDIYPL--WQQYVVDVTSRFGDAFEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSLSIF 745
            LE K+ E++  L     QL   +  I  ++        + Q +S  +V  S     + R    +NYS  TR SK++F RF G  VRDWL+K +QFF LD TP    V +AS   DG + +W  +     F +  L  W  Y + +   F +  +DP+S L Q+K T  ++EY  +FEL   +V L  ++ + ++
Sbjct:   25 LENKIAEQNQKLDKSFAQLIDTIRLISVKVNNASSSGHLQQQRSRETVYPSSEVFHVRRTGTNSNYSAVTRSSKLDFHRFSGDRVRDWLFKLEQFFSLDFTPEELKVSIASTLCDGAAAKWYKSLFESDFGVKLLSNWNMYKLLLEEHFAEVLDDPISELKQLKETNGIEEYHKKFELLRARVNLSEDYLVRVY 218          
BLAST of GT621374 vs. TrEMBL
Match: Q9LHM4_ARATH (Gypsy/Ty-3 retroelement polyprotein; 69905-74404 OS=Arabidopsis thaliana GN=T21B14.24 PE=4 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.085e-19
Identity = 62/202 (30.69%), Postives = 113/202 (55.94%), Query Frame = 2
Query:  182 TLADLEKKMDERHDTLQARLEQLNIQVGTIMEEIRTM-----LQAQSTHSVNGSP---RD--DTLVRNNPITNYS--TRISKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQKFDIYPL--WQQYVVDVTSRFGDAFEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSLSIF 745
            T+A+  K+M ++   L A L +     G +++E  T+       +QS  + +G P   RD     VR++    Y+  TR+ K++FPRFDG  +++WL+K ++FF +D+TP    V++A+IH D  +  W  ++++    +  L  W+ YV  +  RF D  +DP++ L  ++ T  + +Y  +FEL  T+V L  E+ +S++
Sbjct:   32 TVAEQHKEMMKQFADLYAVLSRST--AGKMVDEQSTLDRSAPRSSQSMENRSGYPDPYRDARHQQVRSDHFNAYNNLTRLGKIDFPRFDGTRLKEWLFKVEEFFGVDSTPEDMKVKMAAIHFDSHASTWHQSFIQSGVGLEVLYDWKGYVKLLKERFEDDCDDPMAELKHLQETDGIIDYHQKFELIKTRVNLSEEYLVSVY 231          
BLAST of GT621374 vs. TrEMBL
Match: Q9C7H8_ARATH (Gypsy/Ty3 element polyprotein, putative OS=Arabidopsis thaliana GN=T9I1.13 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.947e-19
Identity = 62/236 (26.27%), Postives = 111/236 (47.03%), Query Frame = 2
Query:  161 VAATRSQTLADLEKKMDERHDTLQARLEQLNIQVG----TIMEEIRTMLQAQSTHSVN-----------GSPRDDT----------------------LVRNNPITNYS--TRISKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQ--KFDIYPLWQQYVVDVTSRFGDAFEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSLSIF 745
            +  TRS    D++ K  E+ D +  R+ +L   V     ++++ +  M+ A S  +               PR  T                      +VR      Y   TR+ K++FPRFDG  + +WL+K ++FF +D TP    V++ +IH D  +  W  ++++     D++  W +YV  +  RF DA +DP++ L +++ T  + EY  QFEL   ++ L  E+ +S++
Sbjct:    1 MVVTRSSQEEDVKGKGVEKEDLIATRMTKLEEMVAEQHKSMLKHMADMMSAMSRTTAKRVTEGEKVLDRSVPRSSTSSMARSGFVEHQRDFQRDFRPEMVRQEVNNQYGNLTRLGKIDFPRFDGSRINEWLFKVEEFFGVDFTPEEMKVKMVAIHFDSHAATWHHSFIQSGIGLDVFFNWPEYVKLLKDRFEDACDDPMAELKKLQETDGIVEYHQQFELIKVRLNLSEEYLVSVY 236          
BLAST of GT621374 vs. TrEMBL
Match: A5AVY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042679 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.770e-18
Identity = 43/122 (35.25%), Postives = 77/122 (63.11%), Query Frame = 2
Query:  386 SKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQK-FDIYPLWQQYVVDVTSRFGD-AFEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSLSIF 745
            +KV+F +F+G  +  WL + + FF +D TPP + VRLA++HL+G ++QW   Y++ +  + Y  W + V+ + +RFG   F+DP++ L  ++ TG +Q Y+D+F+    +  +   H+LS F
Sbjct:   75 TKVDFXKFNGXGLDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNEAYLDWSEXVIALNARFGQHVFDDPIADLRNLRQTGSLQSYMDEFDELYPRADIKESHALSFF 196          
BLAST of GT621374 vs. TrEMBL
Match: B9SQM0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0456620 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.787e-18
Identity = 41/98 (41.84%), Postives = 68/98 (69.39%), Query Frame = 2
Query:  380 RISKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQKFDI-YPLWQQYVVDVTSRFGD-AFEDPLSTLLQIKHTGK 667
            R++K+EFPRFDG  +  WL+KCD+FF +D TP  + V+LA+IH++G +LQW  ++++ +  +  P W +YV  +  RFG+  +EDP++ L  ++ T K
Sbjct:    4 RVAKIEFPRFDGSELEGWLFKCDRFFQIDYTPTHAKVKLAAIHMEGRALQWHKSFIKNRNKLEEPPWVEYVEALKGRFGEKVYEDPMADLKSLEFTDK 101          
BLAST of GT621374 vs. TrEMBL
Match: A5C5K2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039388 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.787e-18
Identity = 59/198 (29.80%), Postives = 104/198 (52.53%), Query Frame = 2
Query:  170 TRSQTLADLEKKMDERHDTLQARLEQLNIQVGTIMEEIRTMLQAQSTHS----VNGSPRDDT----LVRNNPITNYSTRISKVEFPRFDGKNVRDWLYKCDQFFLLDNTPPTSMVRLASIHLDGLSLQWQLNYMRQKFDIYPLWQQYVVDVTSRFGDA-FEDPLSTLLQIKHTGKVQEYIDQFELALTQVTLIPEHSL 736
            TR +T A+    ++E     ++  +Q+N  +  ++ E++T+  ++S ++     N   RD++      R+N I ++  +  K+ FP+F+G +   W+YK +Q+F   N  P   V+LAS HL+G++LQW  +    KF     W ++   V  RFG   +EDP   L ++K T  V  Y + FE    +V  +PE+ L
Sbjct:    3 TRGKTNAEFRNDVNEILARHESSFDQVNAALQAVLTELQTLRASRSQNTSPSETNPFARDESSHPHTARSNTINDHPHQHLKLSFPKFNGDDPTGWIYKAEQYFDFMNITPGQQVQLASFHLEGIALQW--HRWLTKFRGPLTWDEFTKAVQLRFGPTDYEDPSEALTRLKQTTTVAAYQEAFEKLSHRVDGLPENFL 198          
The following BLAST results are available for this feature:
BLAST of GT621374 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5B326_VITVI4.214e-2036.89Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AJD0_VITVI4.214e-2036.89Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SNM0_RICCO9.388e-2028.09Putative uncharacterized protein OS=Ricinus commun... [more]
B9SUW3_RICCO2.731e-1930.00Putative uncharacterized protein OS=Ricinus commun... [more]
Q9SX87_ARATH4.659e-1931.96F16N3.16 OS=Arabidopsis thaliana GN=F16N3.16 PE=4 ... [more]
Q9LHM4_ARATH6.085e-1930.69Gypsy/Ty-3 retroelement polyprotein; 69905-74404 O... [more]
Q9C7H8_ARATH7.947e-1926.27Gypsy/Ty3 element polyprotein, putative OS=Arabido... [more]
A5AVY5_VITVI1.770e-1835.25Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SQM0_RICCO8.787e-1841.84Putative uncharacterized protein OS=Ricinus commun... [more]
A5C5K2_VITVI8.787e-1829.80Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag proteinPFAMPF03732Retrotrans_gagcoord: 114..195
score: 1.4

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT621374 ID=GT621374; Name=GT621374; organism=Lens culinaris; type=EST; length=765bp
TTCTATCAAATTCTCTGCTATTTATTTCATTCAATTTCAACGAACTGCAT
TCTAAAATCTTTGTGGTTCCTGAATTTGTTTGTTAGTTATTATTGGTGCC
ATCCCTAATAATCCAAATCTACCTTTTCCTTAACAATTGGTATCATCTTG
AAAATCCACTGTGGCCGCCACACGCTCTCAAACACTCGCAGATCTGGAGA
AGAAGATGGATGAGCGTCATGATACTCTTCAAGCTCGTCTTGAGCAGCTT
AACATTCAGGTGGGCACCATAATGGAAGAGATACGTACCATGTTACAAGC
TCAATCGACTCACAGTGTCAACGGCTCACCTCGCGACGACACTCTGGTTC
GGAACAATCCCATAACCAATTATTCTACTCGAATCTCGAAAGTTGAGTTT
CCTCGTTTTGACGGAAAGAACGTCCGGGATTGGTTGTACAAATGCGATCA
ATTTTTCTTGTTGGACAACACGCCGCCGACATCCATGGTTCGGTTGGCCT
CGATTCATCTTGATGGTCTTTCCCTACAATGGCAACTCAATTACATGAGA
CAGAAGTTTGATATCTACCCCCTTTGGCAACAATATGTTGTTGATGTGAC
ATCTAGATTTGGTGATGCTTTTGAAGACCCTTTATCTACTCTGCTTCAGA
TCAAACATACTGGAAAGGTACAAGAATATATTGATCAATTTGAGTTAGCC
CTCACTCAGGTAACACTCATCCCAGAACATTCTCTTAGCATTTTTTTTAG
ATGGCCTTAATCATC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom