GT621381

EST Overview


Name	GT621381
Unique Name	GT621381
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	666

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT621381 vs. TrEMBL
Match: D7TS66_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_51.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029035001 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.274e-37
Identity = 80/112 (71.43%), Postives = 86/112 (76.79%), Query Frame = 3

Query:    3 SASVKNGDNSSPXXXXXXXXXXXXXXXXSPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            S  VK+GD S P                S RL+NPLEI+WKSFSLVFFAEWGDRSMLATIAL AAQSPWGVASGAIAGHL AT IAI+GG+ LANYISEKLVGYLGG LFL+
Sbjct:  233 SIVVKSGDKSGPELDEFVEAEELVKEKVSKRLTNPLEIVWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLFATTIAILGGAFLANYISEKLVGYLGGALFLV 344

[Close]

BLAST of GT621381 vs. TrEMBL
Match: B9RWP5_RICCO (Transmembrane protein TPARL, putative OS=Ricinus communis GN=RCOM_1023260 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.106e-36
Identity = 78/112 (69.64%), Postives = 87/112 (77.68%), Query Frame = 3

Query:    3 SASVKNGDNSSPXXXXXXXXXXXXXXXXSPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            S  V+NGD +SP                S +L+NP EIIWKSFSLVFFAEWGDRSMLATIAL AAQSPWGVA+GAIAGHL+AT IAI+GG+ LANYISEKLVGYLGG LFL+
Sbjct:  230 SDEVRNGDKNSPELDEYAEAEELVKEKVSKKLTNPFEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVATGAIAGHLIATSIAILGGAFLANYISEKLVGYLGGVLFLV 341

[Close]

BLAST of GT621381 vs. TrEMBL
Match: B9GMI0_POPTR (Predicted membrane protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_179024 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.020e-34
Identity = 75/112 (66.96%), Postives = 82/112 (73.21%), Query Frame = 3

Query:    3 SASVKNGDNSSPXXXXXXXXXXXXXXXXSPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            S   K GD S P                S  L+NP EI+WKSFSLVFFAEWGDRSMLATIAL AAQSPWGVA+GAIAGHL+AT  AI+GG+ LANYISEKLVGYLGG LFL+
Sbjct:  194 SKDAKTGDKSCPELDEYAEAEELVKEKVSKPLTNPFEIVWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVATGAIAGHLVATSFAILGGAFLANYISEKLVGYLGGVLFLV 305

[Close]

BLAST of GT621381 vs. TrEMBL
Match: D7MHE4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915557 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.754e-32
Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 3

Query:   15 KNGDNSSPXXXXXXXXXXXXXXXXSPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            KNG+ +                  S +L+NPLEI+WKSFSLVFFAEWGDRSMLAT+AL AAQSP GVASGAIAGHL+AT +AI+GG+ LANYISEKLVGY+GG LFL+
Sbjct:  242 KNGEETGIELGEYSEAEELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLV 349

[Close]

BLAST of GT621381 vs. TrEMBL
Match: A9NN11_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.597e-32
Identity = 69/84 (82.14%), Postives = 73/84 (86.90%), Query Frame = 3

Query:   87 SPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            S RLS P EIIWKSFSL FFAEWGDRSMLATIAL AAQSPWGVASGAI GH+ AT IA+VGG LLA YISEKLVGYLGG LF++
Sbjct:  264 SKRLSTPTEIIWKSFSLAFFAEWGDRSMLATIALGAAQSPWGVASGAIGGHVAATSIAVVGGGLLAQYISEKLVGYLGGALFIV 347

[Close]

BLAST of GT621381 vs. TrEMBL
Match: A5B061_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011222 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.785e-31
Identity = 72/101 (71.29%), Postives = 77/101 (76.24%), Query Frame = 3

Query:    3 SASVKNGDNSSPXXXXXXXXXXXXXXXXSPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKL 305
            S  VK+GD S P                S RL+NPLEI+WKSFSLVFFAEWGDRSMLATIAL AAQSPWGVASGAIAGHL AT IAI+GG+LLANYISEKL
Sbjct:  646 SIVVKSGDKSGPELDEFVEAEELVKEKVSKRLTNPLEIVWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLFATTIAILGGALLANYISEKL 746

[Close]

BLAST of GT621381 vs. TrEMBL
Match: Q2R2Z4_ORYSJ (Os11g0544500 protein OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.578e-30
Identity = 65/82 (79.27%), Postives = 77/82 (93.90%), Query Frame = 3

Query:   93 RLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            +L++PLE++WKSFSLVFFAEWGDRSMLATIAL AAQSP+GVASGAIAGHL+AT +AIVGG+ LANY+SEKLVG +GG LFL+
Sbjct:  256 KLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLVATFLAIVGGAFLANYLSEKLVGLIGGVLFLL 337

[Close]

BLAST of GT621381 vs. TrEMBL
Match: B8BKY2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36409 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.578e-30
Identity = 65/82 (79.27%), Postives = 77/82 (93.90%), Query Frame = 3

Query:   93 RLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            +L++PLE++WKSFSLVFFAEWGDRSMLATIAL AAQSP+GVASGAIAGHL+AT +AIVGG+ LANY+SEKLVG +GG LFL+
Sbjct:  223 KLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLVATFLAIVGGAFLANYLSEKLVGLIGGVLFLL 304

[Close]

BLAST of GT621381 vs. TrEMBL
Match: B6TEV6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.397e-30
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 3

Query:   87 SPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            S  L++PLE++WKSFSLVFFAEWGDRSMLATIAL AAQSP GVASGAIAGHL+AT  AI+GG+ LANY+SEKLVG LGG LFL+
Sbjct:  264 SKNLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPLGVASGAIAGHLIATAFAILGGAFLANYLSEKLVGLLGGVLFLL 347

[Close]

BLAST of GT621381 vs. TrEMBL
Match: B4FQE9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.397e-30
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 3

Query:   87 SPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            S  L++PLE++WKSFSLVFFAEWGDRSMLATIAL AAQSP GVASGAIAGHL+AT  AI+GG+ LANY+SEKLVG LGG LFL+
Sbjct:  264 SKNLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPLGVASGAIAGHLIATAFAILGGAFLANYLSEKLVGLLGGVLFLL 347

[Close]

BLAST of GT621381 vs. SwissProt
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.092e-16
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            I+ +SF+L F AEWGDR+ +ATIALAA+ + WGV++GAI GH +   IA++GG  +A  ISEK V  +GG LF +
Sbjct:  121 IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYL 195

[Close]

BLAST of GT621381 vs. SwissProt
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.828e-13
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFL 335
            I  ++ +L F AEWGDRS L TI LAA + P+GVA G   GH L T +A++GG ++A  IS + V  +GG +FL
Sbjct:  235 IFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFL 308

[Close]

BLAST of GT621381 vs. SwissProt
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.828e-13
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFL 335
            I  ++ +L F AEWGDRS L TI LAA + P+GVA G   GH L T +A++GG ++A  IS + V  +GG +FL
Sbjct:  235 IFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFL 308

[Close]

BLAST of GT621381 vs. SwissProt
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.828e-13
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFL 335
            I  ++ +L F AEWGDRS L TI LAA + P+GVA G   GH L T +A++GG ++A  IS + V  +GG +FL
Sbjct:  236 IFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFL 309

[Close]

BLAST of GT621381 vs. SwissProt
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.647e-11
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 3

Query:   96 LSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFL 335
            L +PL I  K+F+L F +EWGDRS +ATIA+AA+ + +GV  GA  GH   T +A++ G  ++  I    V ++GG LF+
Sbjct:  198 LFSPLFI--KAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFI 275

[Close]

BLAST of GT621381 vs. SwissProt
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 4.672e-8
Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 3

Query:  117 IW-KSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            +W + F +VF  E GDRS ++ IA+A     W V +GA+ GH + + +A+VGG LLA  IS + +      LF I
Sbjct:  192 VWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFI 266

[Close]

BLAST of GT621381 vs. SwissProt
Match: YLY5_SCHPO (UPF0016 membrane protein C186.05c OS=Schizosaccharomyces pombe GN=SPAC186.05c PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 7.969e-8
Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 3

Query:  123 KSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            K+F+L+F +E GDRS +ATI ++A +    V  G   GH+L T +A++ G  ++N I    V + GG +F+I
Sbjct:  181 KAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMI 252

[Close]

BLAST of GT621381 vs. TAIR peptide
Match: AT4G13590.2 (| Symbols: | Uncharacterized protein family (UPF0016) | chr4:7901369-7903792 REVERSE LENGTH=359)

HSP 1 Score: 142.51 bits (358), Expect = 1.940e-34
Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 3

Query:   15 KNGDNSSPXXXXXXXXXXXXXXXXSPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            KNG+ +                  S +L+NPLEI+WKSFSLVFFAEWGDRSMLAT+AL AAQSP GVASGAIAGHL+AT +AI+GG+ LANYISEKLVGY+GG LFL+
Sbjct:  242 KNGEETGIELGEYSEAEELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLV 349

[Close]

BLAST of GT621381 vs. TAIR peptide
Match: AT4G13590.1 (| Symbols: | Uncharacterized protein family (UPF0016) | chr4:7901369-7903792 REVERSE LENGTH=359)

HSP 1 Score: 142.51 bits (358), Expect = 1.940e-34
Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 3

Query:   15 KNGDNSSPXXXXXXXXXXXXXXXXSPRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            KNG+ +                  S +L+NPLEI+WKSFSLVFFAEWGDRSMLAT+AL AAQSP GVASGAIAGHL+AT +AI+GG+ LANYISEKLVGY+GG LFL+
Sbjct:  242 KNGEETGIELGEYSEAEELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLV 349

[Close]

BLAST of GT621381 vs. TAIR peptide
Match: AT1G64150.1 (| Symbols: | Uncharacterized protein family (UPF0016) | chr1:23809047-23812579 REVERSE LENGTH=370)

HSP 1 Score: 95.9005 bits (237), Expect = 2.082e-20
Identity = 45/74 (60.81%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  117 IWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            I  +F+LVF AEWGD+S  +TIALAAA SP GV +GA+AGH  AT +A++GGSLL N++SEK + Y+GG LFL+
Sbjct:  286 IISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEKAIAYVGGVLFLV 359

[Close]

BLAST of GT621381 vs. TAIR peptide
Match: AT5G36290.2 (| Symbols: | Uncharacterized protein family (UPF0016) | chr5:14302977-14304972 FORWARD LENGTH=293)

HSP 1 Score: 80.1073 bits (196), Expect = 1.182e-15
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFL 335
            I  +SF L F AEWGDRS +ATIALA  ++  GVA GA  GH + T +A+VGGS+LA+ IS++ V  +GG LFL
Sbjct:  208 IFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFL 281

[Close]

BLAST of GT621381 vs. TAIR peptide
Match: AT5G36290.1 (| Symbols: | Uncharacterized protein family (UPF0016) | chr5:14302977-14304972 FORWARD LENGTH=293)

HSP 1 Score: 80.1073 bits (196), Expect = 1.182e-15
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFL 335
            I  +SF L F AEWGDRS +ATIALA  ++  GVA GA  GH + T +A+VGGS+LA+ IS++ V  +GG LFL
Sbjct:  208 IFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFL 281

[Close]

BLAST of GT621381 vs. TAIR peptide
Match: AT1G25520.1 (| Symbols: | Uncharacterized protein family (UPF0016) | chr1:8962324-8964173 FORWARD LENGTH=230)

HSP 1 Score: 80.1073 bits (196), Expect = 1.182e-15
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            I  K+FS+ FF EWGD+S LATI LAA ++P+GV  G +    L T  A++GG  LA+ ISE++V   GG LF+I
Sbjct:  144 IFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLGGVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFII 218

[Close]

BLAST of GT621381 vs. TAIR peptide
Match: AT1G68650.1 (| Symbols: | Uncharacterized protein family (UPF0016) | chr1:25775825-25777683 FORWARD LENGTH=228)

HSP 1 Score: 78.1814 bits (191), Expect = 4.493e-15
Identity = 39/75 (52.00%), Postives = 50/75 (66.67%), Query Frame = 3

Query:  114 IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAIVGGSLLANYISEKLVGYLGGGLFLI 338
            I  K+FS+ FF EWGD+S LATI LAA ++P GV  G I    L T  A++GG  LA+ ISE++V   GG LF+I
Sbjct:  142 IFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLGGIVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFII 216

The following BLAST results are available for this feature:

BLAST of GT621381 vs. TrEMBL
BLAST of GT621381 vs. SwissProt
BLAST of GT621381 vs. TAIR peptide

BLAST of GT621381 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7TS66_VITVI	8.274e-37	71.43	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RWP5_RICCO	4.106e-36	69.64	Transmembrane protein TPARL, putative OS=Ricinus c...	[more]
B9GMI0_POPTR	5.020e-34	66.96	Predicted membrane protein (Fragment) OS=Populus t...	[more]
D7MHE4_ARALY	2.754e-32	65.74	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A9NN11_PICSI	3.597e-32	82.14	Putative uncharacterized protein OS=Picea sitchens...	[more]
A5B061_VITVI	1.785e-31	71.29	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q2R2Z4_ORYSJ	2.578e-30	79.27	Os11g0544500 protein OS=Oryza sativa subsp. japoni...	[more]
B8BKY2_ORYSI	2.578e-30	79.27	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6TEV6_MAIZE	4.397e-30	78.57	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B4FQE9_MAIZE	4.397e-30	78.57	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of GT621381 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
Y615_SYNY3	2.092e-16	53.33	UPF0016 membrane protein sll0615 OS=Synechocystis ...	[more]
TM165_RAT	2.828e-13	48.65	Transmembrane protein 165 OS=Rattus norvegicus GN=...	[more]
TM165_MOUSE	2.828e-13	48.65	Transmembrane protein 165 OS=Mus musculus GN=Tmem1...	[more]
TM165_HUMAN	2.828e-13	48.65	Transmembrane protein 165 OS=Homo sapiens GN=TMEM1...	[more]
YD68_SCHPO	2.647e-11	43.75	UPF0016 membrane protein C17G8.08c OS=Schizosaccha...	[more]
YB37_YEAST	4.672e-8	40.00	UPF0016 membrane protein YBR187W OS=Saccharomyces ...	[more]
YLY5_SCHPO	7.969e-8	38.89	UPF0016 membrane protein C186.05c OS=Schizosacchar...	[more]

BLAST of GT621381 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT4G13590.2	1.940e-34	65.74	\| Symbols: \| Uncharacterized protein family (UPF0...	[more]
AT4G13590.1	1.940e-34	65.74	\| Symbols: \| Uncharacterized protein family (UPF0...	[more]
AT1G64150.1	2.082e-20	60.81	\| Symbols: \| Uncharacterized protein family (UPF0...	[more]
AT5G36290.2	1.182e-15	55.41	\| Symbols: \| Uncharacterized protein family (UPF0...	[more]
AT5G36290.1	1.182e-15	55.41	\| Symbols: \| Uncharacterized protein family (UPF0...	[more]
AT1G25520.1	1.182e-15	50.67	\| Symbols: \| Uncharacterized protein family (UPF0...	[more]
AT1G68650.1	4.493e-15	52.00	\| Symbols: \| Uncharacterized protein family (UPF0...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 33..44 score
None	No IPR available	SEG	seg	seg	coord: 13..28 score
None	No IPR available	SEG	seg	seg	coord: 38..61 score
IPR001727	Uncharacterised protein family UPF0016	PANTHER	PTHR12608	TRANSMEMBRANE PROTEIN HTP-1 RELATED	coord: 37..122 score: 3.1
IPR001727	Uncharacterised protein family UPF0016	PFAM	PF01169	UPF0016	coord: 40..114 score: 3.2

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT621381 ID=GT621381; Name=GT621381; organism=Lens culinaris; type=EST; length=666bp
CTTCAGCTTCTGTTAAAAATGGTGATAACAGCAGTCCTGAACTTGACGAA
CTCGCTGAAGCTGAGGAGCTTGTGAAAGAAAAGGCATCCCCTCGGCTTTC
AAATCCACTCGAGATCATTTGGAAATCATTCAGTCTTGTGTTTTTTGCTG
AATGGGGAGATCGTTCAATGCTTGCAACAATCGCGCTCGCGGCTGCTCAG
TCTCCTTGGGGTGTGGCAAGTGGAGCCATTGCTGGACACCTACTAGCAAC
ATGTATTGCCATTGTTGGAGGATCACTCCTTGCTAACTACATTTCTGAAA
AACTGGTTGGTTACTTGGGTGGAGGGCTGTTTCTAATTTTTGCTGTAGCC
ACCTTTTTTGGGGTTTTCTGATTTTCTTCGAAGCCCTACTCATTTTTGTG
TGTGTGCAATATATCACTTGTGGAAATAATAAGGTTACATACTCAAATGC
AGAACCAATGATGACAGAACAAACATGAAAAAAAATCATACTTGTTGATT
TCCTTTAGTAAACATTAAGAGCCAATTATTCACACGGATAGATAATAAGA
AACATGTTATCTGCCATTAGAGTTAAACTTTGAGTAGAATGTTGTGTAAC
TGTTTCTCCTAGGACTATATTTTGTAATATGTGTGTTCTATTAATGTAAC
TGTTGAAGTATTCATC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001727	GDT1-like

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