GT621477
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT621477 vs. TrEMBL
Match: C5X0Z7_SORBI (Putative uncharacterized protein Sb01g049380 OS=Sorghum bicolor GN=Sb01g049380 PE=4 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 9.915e-62 Identity = 117/181 (64.64%), Postives = 141/181 (77.90%), Query Frame = 1 Query: 223 DNKMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPS-EISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 DNKMI +CDKLIGVFLVDKPTP DWRKLLAFSREW+NIRPHFF RC +KA +E NP M +DEDVQRHN LL+V++ PS E+ +IV+KRRKDFT EFF HL+ V SYH++ EKQ ELAKLG C+ A+QA+D T S+E +NAA+LK +DI+NSPS+DAACRKID+LA Sbjct: 23 DNKMIKICDKLIGVFLVDKPTPMDWRKLLAFSREWDNIRPHFFKRCQEKADTELNPEMKHNLLRLGRKLKEIDEDVQRHNELLEVVKSTPSDELGSIVAKRRKDFTVEFFNHLYYVAESYHDEPEKQTELAKLGNDCVDALQAHDDTTGSLEALNAAELKLKDILNSPSVDAACRKIDDLA 203
BLAST of GT621477 vs. TrEMBL
Match: C0PEL6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.426e-61 Identity = 119/194 (61.34%), Postives = 145/194 (74.74%), Query Frame = 1 Query: 184 VASQEDTSNDVLGDNKMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPSE-ISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 VA S D +NKMI +CDKLIGVFLVDKPTPTDWRKLLAFSREW+NIRPHFF RC +KA +E NP M +DEDVQRHN LL+V++ PS+ + +IV+KRRKDFT EFF HL+ V S H++ EKQ ELAKLG C+ A+QA+D T S+E +NAA+LK +DI+NSPS+DAACRKID+LA Sbjct: 104 VAKMNQNSRD---NNKMIKICDKLIGVFLVDKPTPTDWRKLLAFSREWDNIRPHFFKRCQEKADTELNPEMKHNLLRLGRKLKEIDEDVQRHNELLEVVKSTPSDKLGSIVAKRRKDFTVEFFNHLYYVAESCHDEPEKQTELAKLGNDCVDALQAHDDTTGSLEALNAAELKLKDILNSPSVDAACRKIDDLA 294
BLAST of GT621477 vs. TrEMBL
Match: B6U8B7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.426e-61 Identity = 119/194 (61.34%), Postives = 145/194 (74.74%), Query Frame = 1 Query: 184 VASQEDTSNDVLGDNKMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPSE-ISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 VA S D +NKMI +CDKLIGVFLVDKPTPTDWRKLLAFSREW+NIRPHFF RC +KA +E NP M +DEDVQRHN LL+V++ PS+ + +IV+KRRKDFT EFF HL+ V S H++ EKQ ELAKLG C+ A+QA+D T S+E +NAA+LK +DI+NSPS+DAACRKID+LA Sbjct: 104 VAKMNQNSRD---NNKMIKICDKLIGVFLVDKPTPTDWRKLLAFSREWDNIRPHFFKRCQEKADTELNPEMKHNLLRLGRKLKEIDEDVQRHNELLEVVKSTPSDKLGSIVAKRRKDFTVEFFNHLYYVAESCHDEPEKQTELAKLGNDCVDALQAHDDTTGSLEALNAAELKLKDILNSPSVDAACRKIDDLA 294
BLAST of GT621477 vs. TrEMBL
Match: Q9C8X8_ARATH (At1g36320/F7F23_4 OS=Arabidopsis thaliana GN=At1g36320 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.442e-60 Identity = 115/192 (59.90%), Postives = 151/192 (78.65%), Query Frame = 1 Query: 193 QEDTSNDVLGDN-KMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDP-SEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 ++D S +V+ DN +MI VCDKLI VF+VDKPTP+DWR+LLAFS+EW++IRPHF+ RC ++A SE NP M VDED+QRHN LL+VI++ P +EI +V++RRKDFTNEFFEHLH V SY+++ ++QN LA LG+ + AVQAYD +TESI+ +NAA++K QDI+NSPSLDAACRKID+LA Sbjct: 79 KKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYKRCQERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFTNEFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAYDTSTESIDALNAAEMKLQDIINSPSLDAACRKIDSLA 270
BLAST of GT621477 vs. TrEMBL
Match: B9RJD5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033290 PE=4 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 7.105e-60 Identity = 111/195 (56.92%), Postives = 146/195 (74.87%), Query Frame = 1 Query: 178 NYVASQEDTSNDVLGDNKMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 +Y+A ++ + ++KM+ VCDKLIGVF+VDK TP DWR+LLAFS+EW+NIRPHF++RC ++A SE +P + +DEDVQRHN LL+VI+ PSEIS +V++RRKDFT EFF H+ V SYH++ QN LAKLG C+ AVQAYD TES+E ++AA+LK QDI+NSPSLD+ACRKID+LA Sbjct: 61 SYIARTGHENDSRIDEDKMVRVCDKLIGVFMVDKNTPADWRRLLAFSKEWDNIRPHFYSRCQERADSENDPGIKHKLLRFARKLKEIDEDVQRHNELLEVIKNAPSEISEVVARRRKDFTKEFFVHVFTVAQSYHDNPTVQNALAKLGNDCVAAVQAYDSTTESMEALHAAELKLQDIINSPSLDSACRKIDDLA 255
BLAST of GT621477 vs. TrEMBL
Match: D7KM16_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473719 PE=4 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.212e-59 Identity = 113/192 (58.85%), Postives = 151/192 (78.65%), Query Frame = 1 Query: 193 QEDTSNDVLGDN-KMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDP-SEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 ++D ++V+ DN +MI VCDKLI VF+VDKPTP+DWR+LLAFS+EW++IRPHF+ RC ++A SE NP M VDED+QRHN LL+VI++ P ++I +V++ RKDFTNEFFEHLH V SY++++++QN LA LG+ + AVQAYD +TESI+ +NAA+LK QDI+NSPSLDAACRKID+LA Sbjct: 79 KKDGGSEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYRRCQERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPADIGELVARHRKDFTNEFFEHLHTVAESYYDNLDEQNALASLGKLSIAAVQAYDTSTESIDALNAAELKLQDIINSPSLDAACRKIDSLA 270
BLAST of GT621477 vs. TrEMBL
Match: A3A5Q9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06320 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.899e-58 Identity = 112/194 (57.73%), Postives = 145/194 (74.74%), Query Frame = 1 Query: 184 VASQEDTSNDVLGDNKMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPS-EISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 VA TS + + KMI + DKLIGVF+VDKPTPTDWRKLL+FSREW+NIRPHFF RC ++A +E+NP M +DEDVQRHN LL+V++ PS EI ++++KR KDFT EFF HL+ V SYH+D EKQ ELA+LG C+ A+QA+D + S+E ++AA+LK +DI+NSPS+DAACRKID+LA Sbjct: 104 VAKTNQTSKE---NQKMIKISDKLIGVFMVDKPTPTDWRKLLSFSREWDNIRPHFFKRCQERADAESNPEMKHNLLRLARKLKEIDEDVQRHNELLEVVKSTPSDEIGSVIAKRHKDFTVEFFNHLYYVAESYHDDPEKQRELAQLGNDCVDALQAHDDTSGSLEALSAAELKLKDILNSPSVDAACRKIDDLA 294
BLAST of GT621477 vs. TrEMBL
Match: A2X3M2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06814 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.899e-58 Identity = 112/194 (57.73%), Postives = 145/194 (74.74%), Query Frame = 1 Query: 184 VASQEDTSNDVLGDNKMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPS-EISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 VA TS + + KMI + DKLIGVF+VDKPTPTDWRKLL+FSREW+NIRPHFF RC ++A +E+NP M +DEDVQRHN LL+V++ PS EI ++++KR KDFT EFF HL+ V SYH+D EKQ ELA+LG C+ A+QA+D + S+E ++AA+LK +DI+NSPS+DAACRKID+LA Sbjct: 104 VAKTNQTSKE---NQKMIKISDKLIGVFMVDKPTPTDWRKLLSFSREWDNIRPHFFKRCQERADAESNPEMKHNLLRLARKLKEIDEDVQRHNELLEVVKSTPSDEIGSVIAKRHKDFTVEFFNHLYYVAESYHDDPEKQRELAQLGNDCVDALQAHDDTSGSLEALSAAELKLKDILNSPSVDAACRKIDDLA 294
BLAST of GT621477 vs. TrEMBL
Match: B9H779_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_716554 PE=4 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.482e-57 Identity = 108/177 (61.02%), Postives = 133/177 (75.14%), Query Frame = 1 Query: 232 MIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 M VCDKLI VF+VDKPTP DWRKLLAFS+EWNN+RPHF+ R ++A SE +P +DED+QRHN LL VI+K PSE+S +V+K RKDFT EFF HL+ V SYH++ +QN LAKLG C+ AVQAYD ATE+ E +NAA++K QDI+NSPSLDAAC+KID+LA Sbjct: 1 MARVCDKLIDVFMVDKPTPNDWRKLLAFSKEWNNLRPHFYKRSQERADSEDDPGKKHNLLKFARKFKEIDEDMQRHNELLGVIKKAPSELSEVVAKHRKDFTKEFFAHLYTVAQSYHDNPSEQNALAKLGNDCVAAVQAYDSATENTEALNAAEIKLQDIINSPSLDAACKKIDDLA 177
BLAST of GT621477 vs. TrEMBL
Match: B9GUI1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1071665 PE=4 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.254e-56 Identity = 107/177 (60.45%), Postives = 133/177 (75.14%), Query Frame = 1 Query: 232 MIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 M VC+KLI VF+VDKPTP DWRKLLAFS+EW+N+RPHF+ RC ++A E +P +DEDVQRHN LL VI+ PSE++ IV+KRRKDFT EFF HL+ V SYH++ +QN LAKLG C+ VQAYD ATE++E +NAA+LK QDI+NSPSLDAAC+KID+LA Sbjct: 1 MASVCNKLIEVFMVDKPTPNDWRKLLAFSKEWDNLRPHFYKRCQERADCEDDPGKKHNLLRFARKLKEIDEDVQRHNELLGVIKAAPSELTEIVAKRRKDFTKEFFVHLYTVAQSYHDNPSEQNALAKLGNDCVATVQAYDCATENMEALNAAELKLQDIINSPSLDAACKKIDDLA 177
BLAST of GT621477 vs. SwissProt
Match: Y4920_ARATH (Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.751e-34 Identity = 69/177 (38.98%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 232 MIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 M CDK+I +FL +KP W+ L EWN +F+ RC +A +ET+P + +D+++++HN LL I+++P++I+ I +KRR+DFT EFF ++ ++ + +E ++ +A+L CL+AV AYD ES+E ++ AQ KF+DI+NSPS+D+AC KI +LA Sbjct: 83 MAQFCDKIIDLFLNEKPKVKQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTDINAIAAKRRRDFTGEFFRYV-TLLSETLDGLEDRDAVARLATRCLSAVSAYDNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLA 258
BLAST of GT621477 vs. TAIR peptide
Match: AT1G36320.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr1:13671876-13673939 FORWARD LENGTH=414) HSP 1 Score: 236.113 bits (601), Expect = 1.599e-62 Identity = 115/192 (59.90%), Postives = 151/192 (78.65%), Query Frame = 1 Query: 193 QEDTSNDVLGDN-KMIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDP-SEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 ++D S +V+ DN +MI VCDKLI VF+VDKPTP+DWR+LLAFS+EW++IRPHF+ RC ++A SE NP M VDED+QRHN LL+VI++ P +EI +V++RRKDFTNEFFEHLH V SY+++ ++QN LA LG+ + AVQAYD +TESI+ +NAA++K QDI+NSPSLDAACRKID+LA Sbjct: 79 KKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYKRCQERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFTNEFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAYDTSTESIDALNAAEMKLQDIINSPSLDAACRKIDSLA 270
BLAST of GT621477 vs. TAIR peptide
Match: AT4G37920.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr4:17828538-17830317 REVERSE LENGTH=427) HSP 1 Score: 145.206 bits (365), Expect = 3.711e-35 Identity = 69/177 (38.98%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 232 MIGVCDKLIGVFLVDKPTPTDWRKLLAFSREWNNIRPHFFARCNDKAVSETNPTMXXXXXXXXXXXXXVDEDVQRHNVLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHAVIGSYHNDVEKQNELAKLGEACLTAVQAYDGATESIEKINAAQLKFQDIMNSPSLDAACRKIDNLA 762 M CDK+I +FL +KP W+ L EWN +F+ RC +A +ET+P + +D+++++HN LL I+++P++I+ I +KRR+DFT EFF ++ ++ + +E ++ +A+L CL+AV AYD ES+E ++ AQ KF+DI+NSPS+D+AC KI +LA Sbjct: 83 MAQFCDKIIDLFLNEKPKVKQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTDINAIAAKRRRDFTGEFFRYV-TLLSETLDGLEDRDAVARLATRCLSAVSAYDNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLA 258 The following BLAST results are available for this feature:
BLAST of GT621477 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT621477 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT621477 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT621477 ID=GT621477; Name=GT621477; organism=Lens culinaris; type=EST; length=762bpback to top |