GT621778

EST Overview


Name	GT621778
Unique Name	GT621778
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	755

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT621778 vs. TrEMBL
Match: C6TI69_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.306e-73
Identity = 91/130 (70.00%), Postives = 98/130 (75.38%), Query Frame = 1

Query:  169 MFDLVRCSLVCKFWNAILESRSLREFYQXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            MFDLVRCSLVCK WNAI+ESRSLREF +                  RVILGEVAMEQH LA+QCG F+VDQWK HS  V+QCRMKMG +VTGVG KVIRLWSLD YKC EEYS+PD   LVDFDFDESKI
Sbjct:    1 MFDLVRCSLVCKLWNAIVESRSLREFCERKMHKSFAEFTKKPL---RVILGEVAMEQHSLALQCGGFYVDQWKAHSTTVAQCRMKMGMLVTGVGHKVIRLWSLDSYKCIEEYSMPDMFSLVDFDFDESKI 127

HSP 2 Score: 122.094 bits (305), Expect = 1.306e-73
Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGLIGS LCIWRRNGKRS+FPSLEGKF+ GSCMRYFDPEA+VG DDGAVRVFDMYSR+CSQ
Sbjct:  127 IVGLIGSHLCIWRRNGKRSIFPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMYSRKCSQ 188

[Close]

BLAST of GT621778 vs. TrEMBL
Match: B9HNT8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821432 PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.184e-64
Identity = 80/153 (52.29%), Postives = 101/153 (66.01%), Query Frame = 1

Query:  106 TPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAILESRSLREFYQXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKIFI 564
            TPT+I SL+ D LC IF++L +FD+VR S VCKFWN I++   L +                      V L E+A+E  R ++  G+ H+DQWKGHS  V QCRMK G V+TGVGDKV+RLWSL+ YKC EEYS+PD +PLVDFDFDESK  +
Sbjct:   19 TPTSIRSLEHDALCIIFSYLGLFDVVRSSAVCKFWNEIIKRSKLLQLLYLKQQRRSSRSDFSEESL-NVYLEELAIEHQRQSLVQGSLHIDQWKGHSLGVDQCRMKRGLVLTGVGDKVMRLWSLESYKCIEEYSIPDGVPLVDFDFDESKAVV 170

HSP 2 Score: 108.227 bits (269), Expect = 2.184e-64
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL+G+R+CIWRRNG+RS+FPS EG+F+ GSCMRYFDPEA+VG +DG  RVFDMYS++CS+
Sbjct:  181 IVGLVGTRICIWRRNGQRSIFPSREGQFMKGSCMRYFDPEAVVGCEDGTARVFDMYSKKCSR 242

[Close]

BLAST of GT621778 vs. TrEMBL
Match: D7T397_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032215001 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.513e-59
Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 1

Query:   85 QRIKRRETPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAIL-ESRSLREFY--QXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            Q  KR  +     SL  DILC IF  L++FDLVRCS VCK WN ++ +S+ L+  Y  Q                  +V + ++AME HRL++Q G   ++QWKGHS    QCRMKMG ++TGVGDK +RLWSL+ YKC EE+ +P+  PLVDFDFDE+KI
Sbjct:   11 QAQKRMSSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINKSKLLQILYHKQQGGSIGPSSTSHCSEKPLKVCIEQLAMEHHRLSLQ-GLIDIEQWKGHSVRAGQCRMKMGLILTGVGDKAVRLWSLESYKCLEEHFLPNLAPLVDFDFDENKI 170

HSP 2 Score: 103.99 bits (258), Expect = 1.513e-59
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGLIG+R+C WRRNGKRS+FPS EG F+ G CMRY DPEA+VG +DG  RVFDMYSR+CS+
Sbjct:  170 IVGLIGTRICTWRRNGKRSIFPSREGTFMKGLCMRYIDPEAVVGCEDGTARVFDMYSRKCSR 231

[Close]

BLAST of GT621778 vs. TrEMBL
Match: D7LU16_ARALY (F-box family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906562 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.359e-54
Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 1

Query:   88 RIKRRETPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAILESRSLREFY---QXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDE 549
            R  RR    +I SLD DILC IF+FL++FDLV C++VC  W+A+++   L +                         + + + AM+ H++A+  G   +++W+ HS  VSQCRMK G ++TGVGDKV+RLWSL  YKC EEYS+PD   L+DFDFDE
Sbjct:   13 RKTRRRISPSIESLDADILCIIFSFLDLFDLVHCTVVCNSWHAVIKKLKLLQASCRKMHHLGSDFPSSSTSLDGPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSNRVSQCRMKKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDAASLIDFDFDE 169

HSP 2 Score: 97.8265 bits (242), Expect = 1.359e-54
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL+G+R+ IWRRNG+RS+FPS EG F  G CMRY DPEA+VG +DG  RVFDMYS+ CSQ
Sbjct:  186 IVGLVGTRISIWRRNGQRSIFPSREGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQ 247

[Close]

BLAST of GT621778 vs. TrEMBL
Match: A5BAL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013775 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.308e-54
Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 1

Query:   85 QRIKRRETPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAIL-ESRSLREFY--QXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            Q  KR  +     SL  DILC IF  L++FDLVRCS VCK WN ++ +S+ L+  Y  Q                  +V + ++AME HRL++Q G   ++QWKGHS    QCRMKMG ++TGVGDK +RLWSL+ YKC EE+ +P+  PLVDFDFDE+KI
Sbjct:   11 QAQKRMSSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINKSKLLQILYHKQQGGSIGPSSTSHCSEKPLKVCIEQLAMEHHRLSLQ-GLIDIEQWKGHSVRAGQCRMKMGLILTGVGDKAVRLWSLESYKCLEEHFLPNLAPLVDFDFDENKI 170

HSP 2 Score: 86.6557 bits (213), Expect = 2.308e-54
Identity = 45/97 (46.39%), Postives = 53/97 (54.64%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMR-----------------------------------YFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGLIG+R+C WRRNGKRS+FPS EG F+ G CMR                                   Y DPEA+VG +DG  RVFDMYSR+CS+
Sbjct:  170 IVGLIGTRICXWRRNGKRSIFPSXEGTFMKGLCMRNAVVXSVSENGVWSLGEWEGHTVLGSCIEMVVVRCYIDPEAVVGCEDGTARVFDMYSRKCSR 266

[Close]

BLAST of GT621778 vs. TrEMBL
Match: B9RVI4_RICCO (F-box and wd40 domain protein, putative OS=Ricinus communis GN=RCOM_0962810 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.158e-41
Identity = 47/77 (61.04%), Postives = 60/77 (77.92%), Query Frame = 1

Query:  331 MEQHRLAV-QCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            M+ HR A+ +  + ++D+WK HS  V QCRMKMG ++TGVGDK +RLWSL+ YKC EEYS+P+   LVDFDFDESKI
Sbjct:    1 MKHHRQALSEPSSVYIDKWKAHSLGVDQCRMKMGLLLTGVGDKAMRLWSLESYKCIEEYSIPNACSLVDFDFDESKI 77

HSP 2 Score: 88.9669 bits (219), Expect = 5.158e-41
Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGLIG+++C+WRRNG  S FP   G ++ G CMRY DPEA+VG +DG  R+FD+YS++CS+
Sbjct:   77 IVGLIGTQVCLWRRNGPMSTFPPRGGTYMKGLCMRYLDPEAVVGCEDGTARIFDLYSKKCSK 138

[Close]

BLAST of GT621778 vs. TrEMBL
Match: C5Y675_SORBI (Putative uncharacterized protein Sb05g005350 OS=Sorghum bicolor GN=Sb05g005350 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.482e-38
Identity = 60/152 (39.47%), Postives = 87/152 (57.24%), Query Frame = 1

Query:  112 TTILSLDGDILCTIFAFLN-MFDLVRCSLVCKFWNAILESRSLRE--FYQXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            +T  SL+ DIL ++F+ L+  FDL RCS VC  WN I+E+  L +  +Y+                   ++    AM++H  +   G     QW GH    + CRMK G+++TGVGDK++RLWS +  K   EY+VP++  LVDFDFDE+KI
Sbjct:   29 STAQSLNDDILRSVFSRLDDHFDLARCSAVCGTWNRIIETAHLMKDLYYKRNPSVRGSSSNISVKSYFEML----AMDEHASSFSRGPAEAFQWIGHPIRATLCRMKSGSILTGVGDKILRLWSAESCKFMNEYNVPNSKTLVDFDFDENKI 176

HSP 2 Score: 74.3294 bits (181), Expect = 8.482e-38
Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCS 752
            IVGL  S++CIWRRN  RS+F S    F  G CM Y DPE ++G +DG   V+DMYSR CS
Sbjct:  176 IVGLTSSQICIWRRNEPRSIFQSGGASFNHGLCMSYADPEVVIGCEDGRAFVYDMYSRSCS 236

[Close]

BLAST of GT621778 vs. TrEMBL
Match: B6TCZ0_MAIZE (F-box domain containing protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.147e-37
Identity = 63/151 (41.72%), Postives = 85/151 (56.29%), Query Frame = 1

Query:  112 TTILSLDGDILCTIFAFLN-MFDLVRCSLVCKFWNAILESRSL-REFYQXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            +T  SL+ DIL ++F+ L+  FDL RCS VC  WN I+E+  L R+ Y                     +L   AM++H  A   G     QW GH    + CRMK G ++TGVGDK++RLWS +  K   EY+VP++  LVDFDFDE+KI
Sbjct:   29 STAQSLNDDILRSVFSRLDDHFDLARCSAVCGSWNRIIETAHLMRDMYYKRNPPARGSSSNISVKSYFEML---AMDEHASAFSRGPAEAFQWIGHPMRATLCRMKSGLILTGVGDKILRLWSAESCKFMNEYNVPNSKTLVDFDFDENKI 176

HSP 2 Score: 71.2478 bits (173), Expect = 4.147e-37
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL  S++CIWRR+  RS+F S    F  G CM + DPE ++G +DG   V+DMYSR CS+
Sbjct:  176 IVGLTSSQICIWRRSEPRSIFQSGGASFNHGLCMSFADPEVVIGCEDGRAFVYDMYSRSCSR 237

[Close]

BLAST of GT621778 vs. TrEMBL
Match: A9NX76_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 7.039e-37
Identity = 64/158 (40.51%), Postives = 88/158 (55.70%), Query Frame = 1

Query:   94 KRRETPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAILESRSL-REFY--QXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            KRR+  +TI  +  D+L  IF  L+  DLVR S V K W +I++  SL R+ Y  Q                  +  + ++  +QHR A+  G+  V  WKGHS  V+ CRM+MG+++TGVGD+  R+W    + C EEYS P    LVD DFDESKI
Sbjct:   19 KRRKRASTIDDIGPDLLLRIFGCLDPLDLVRTSAVTKSWYSIIQRSSLWRDAYYKQRHSLTNHFKQGFLPEMPPKDWVRQLVSQQHRAALVHGSVQVHCWKGHSIGVNCCRMQMGSILTGVGDQTARIWCSKSFHCLEEYSTPSKAALVDLDFDESKI 176

HSP 2 Score: 66.6254 bits (161), Expect = 7.039e-37
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL+G  +CIW+R+G   +     G      C+ Y DPEA +G  DG +R+FDMYS +CS+
Sbjct:  176 IVGLVGGDICIWKRHGSSHMLRPRGGPIQHAHCLCYADPEAAIGCRDGTIRIFDMYSNQCSR 237

[Close]

BLAST of GT621778 vs. TrEMBL
Match: B4FE95_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.440e-36
Identity = 62/151 (41.06%), Postives = 84/151 (55.63%), Query Frame = 1

Query:  112 TTILSLDGDILCTIFAFLN-MFDLVRCSLVCKFWNAILESRSL-REFYQXXXXXXXXXXXXXXXXXXRVILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            +T  SL+ DIL ++F+ L+  FDL RCS VC  WN I+E+  L R+ Y                     +L   AM++H  A   G     QW GH    + CRMK G ++TGVGDK++ LWS +  K   EY+VP++  LVDFDFDE+KI
Sbjct:   29 STAQSLNDDILRSVFSRLDDHFDLARCSAVCGSWNRIIETAHLMRDMYYKRNPPARGSSSNISVKSYFEML---AMDEHASAFSRGPAEAFQWIGHPMRATLCRMKSGLILTGVGDKILCLWSAESCKFMNEYNVPNSKTLVDFDFDENKI 176

HSP 2 Score: 71.2478 bits (173), Expect = 3.440e-36
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL  S++CIWRR+  RS+F S    F  G CM + DPE ++G +DG   V+DMYSR CS+
Sbjct:  176 IVGLTSSQICIWRRSEPRSIFQSGGASFNHGLCMSFADPEVVIGCEDGRAFVYDMYSRSCSR 237

[Close]

BLAST of GT621778 vs. SwissProt
Match: FBW4_ARATH (F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana GN=At3g52030 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 5.364e-59
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 1

Query:   88 RIKRRETPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAILESRSLREFYQXXXXXXXXXXXXXXXXXXR---VILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESK 555
            R  RR+ PT+I SLD DILC IF+FL++FDLV C++VC  WNA+++   L +                     R   + + + AM+ H++A+  G   +++W+ HS+ VSQCRMK G ++TGVGDKV+RLWSL  YKC EEYS+PD   L+DFDFDESK
Sbjct:   13 RKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASCRKMHHLGSDSPSSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRMKKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESK 171

HSP 2 Score: 95.5153 bits (236), Expect = 5.364e-59
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL+G+R+ IWRRNG+RS+FPS  G F  G CMRY DPEA+VG +DG  RVFDMYS+ CSQ
Sbjct:  193 IVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQ 254

[Close]

BLAST of GT621778 vs. TAIR peptide
Match: AT3G52030.2 (| Symbols: | F-box family protein with WD40/YVTN repeat doamin | chr3:19301872-19304227 FORWARD LENGTH=433)

HSP 1 Score: 155.606 bits (392), Expect = 1.839e-60
Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 1

Query:   88 RIKRRETPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAILESRSLREFYQXXXXXXXXXXXXXXXXXXR---VILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESKI 558
            R  RR+ PT+I SLD DILC IF+FL++FDLV C++VC  WNA+++   L +                     R   + + + AM+ H++A+  G   +++W+ HS+ VSQCRMK G ++TGVGDKV+RLWSL  YKC EEYS+PD   L+DFDFDESKI
Sbjct:   13 RKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASCRKMHHLGSDSPSSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRMKKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESKI 172

HSP 2 Score: 95.5153 bits (236), Expect = 1.839e-60
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL+G+R+ IWRRNG+RS+FPS  G F  G CMRY DPEA+VG +DG  RVFDMYS+ CSQ
Sbjct:  172 IVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQ 233

[Close]

BLAST of GT621778 vs. TAIR peptide
Match: AT3G52030.1 (| Symbols: | F-box family protein with WD40/YVTN repeat doamin | chr3:19301872-19304227 FORWARD LENGTH=454)

HSP 1 Score: 154.066 bits (388), Expect = 5.313e-60
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 1

Query:   88 RIKRRETPTTILSLDGDILCTIFAFLNMFDLVRCSLVCKFWNAILESRSLREFYQXXXXXXXXXXXXXXXXXXR---VILGEVAMEQHRLAVQCGTFHVDQWKGHSYAVSQCRMKMGTVVTGVGDKVIRLWSLDRYKCEEEYSVPDTLPLVDFDFDESK 555
            R  RR+ PT+I SLD DILC IF+FL++FDLV C++VC  WNA+++   L +                     R   + + + AM+ H++A+  G   +++W+ HS+ VSQCRMK G ++TGVGDKV+RLWSL  YKC EEYS+PD   L+DFDFDESK
Sbjct:   13 RKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASCRKMHHLGSDSPSSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRMKKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESK 171

HSP 2 Score: 95.5153 bits (236), Expect = 5.313e-60
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 3

Query:  570 IVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQ 755
            IVGL+G+R+ IWRRNG+RS+FPS  G F  G CMRY DPEA+VG +DG  RVFDMYS+ CSQ
Sbjct:  193 IVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQ 254

The following BLAST results are available for this feature:

BLAST of GT621778 vs. TrEMBL
BLAST of GT621778 vs. SwissProt
BLAST of GT621778 vs. TAIR peptide

BLAST of GT621778 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TI69_SOYBN	1.306e-73	70.00	Putative uncharacterized protein (Fragment) OS=Gly...	[more]
B9HNT8_POPTR	2.184e-64	52.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T397_VITVI	1.513e-59	48.45	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7LU16_ARALY	1.359e-54	43.95	F-box family protein OS=Arabidopsis lyrata subsp. ...	[more]
A5BAL7_VITVI	2.308e-54	48.45	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RVI4_RICCO	5.158e-41	61.04	F-box and wd40 domain protein, putative OS=Ricinus...	[more]
C5Y675_SORBI	8.482e-38	39.47	Putative uncharacterized protein Sb05g005350 OS=So...	[more]
B6TCZ0_MAIZE	4.147e-37	41.72	F-box domain containing protein OS=Zea mays PE=2 S...	[more]
A9NX76_PICSI	7.039e-37	40.51	Putative uncharacterized protein OS=Picea sitchens...	[more]
B4FE95_MAIZE	3.440e-36	41.06	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of GT621778 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
FBW4_ARATH	5.364e-59	47.17	F-box/WD-40 repeat-containing protein At3g52030 OS...	[more]

BLAST of GT621778 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G52030.2	1.839e-60	47.50	\| Symbols: \| F-box family protein with WD40/YVTN ...	[more]
AT3G52030.1	5.313e-60	47.17	\| Symbols: \| F-box family protein with WD40/YVTN ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain, cyclin-like	PFAM	PF00646	F-box	coord: 39..79 score: 6.4
IPR001810	F-box domain, cyclin-like	SMART	SM00256	no description	coord: 43..83 score: 6.2
IPR001810	F-box domain, cyclin-like	PROFILE	PS50181	FBOX	coord: 37..86 score: 10
IPR022364	F-box domain, Skp2-like	SUPERFAMILY	81383	F-box domain	coord: 30..126 score: 1.7
None	No IPR available	GENE3D	1.20.1280.50	no description	coord: 39..88 score: 7.6
None	No IPR available	SEG	seg	seg	coord: 7..27 score: NAcoord: 85..102 score
None	No IPR available	SEG	seg	seg	coord: 12..29 score
None	No IPR available	SEG	seg	seg	coord: 64..87 score
None	No IPR available	SEG	seg	seg	coord: 58..78 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT621778 ID=GT621778; Name=GT621778; organism=Lens culinaris; type=EST; length=755bp
CTCCAAACAATGACCAAACCGCAACCAACCTTCACAGCGGCGACACCTAA
CGCGCCTCCTACCCCGGCCAATACTTCCACCGACCAAAGAATAAAACGCC
GCGAAACTCCAACCACAATACTTTCCCTCGACGGCGACATCCTCTGTACC
ATCTTCGCTTTCCTCAACATGTTCGACCTCGTTCGCTGCTCTCTTGTTTG
CAAATTCTGGAATGCAATCCTTGAGTCTCGATCGCTGCGAGAGTTTTACC
AGAAGAAGTTGCTGAAGGATTCTTCGAGTTCATCAGGATTGTCTAAAAAG
TCCTTGAGAGTGATTTTAGGGGAAGTAGCTATGGAGCAGCATAGATTGGC
GGTTCAGTGTGGCACGTTTCATGTTGATCAGTGGAAGGGTCATTCATACG
CGGTTTCTCAGTGTCGAATGAAAATGGGTACGGTTGTTACTGGTGTGGGA
GATAAGGTTATTCGTCTCTGGTCATTAGACCGCTATAAATGTGAAGAAGA
ATACTCGGTACCTGATACGCTACCTCTAGTTGACTTTGATTTTGACGAGA
GCAAGATATTCATTTGTAGATTGTTGGTCTAATTGGAAGTCGTTTGTGCA
TATGGAGGCGGAATGGGAAAAGAAGTGTATTTCCTTCTCTTGAAGGCAAA
TTCATAACAGGTTCATGCATGCGTTACTTTGATCCAGAAGCTATGGTTGG
ATTTGATGACGGGGCTGTTCGAGTTTTTGACATGTACAGTAGGAGATGTT
CTCAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR022364	F-box domain, Skp2-like

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