GT621792
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT621792 vs. TrEMBL
Match: C6T7Z0_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.997e-33 Identity = 85/157 (54.14%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 249 LRRKHKMSYESDMFSIDPIQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSS------------------NNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGE--DVVDVYNDNDMIREESDPLL 659 + +KHKMSY+S FSI+P QNL S CFL + NL+ YSSSDNGSH TYPS EQY L SS NNSPVSKL SK F+SQ+SLEI++ SLEN+ LT N D+L HKIRELE+AMLG D++D Y + +I EESD L Sbjct: 3 MSQKHKMSYDSSRFSIEPAQNLGSCCFLQSGNLDYYSSSDNGSHATYPSVCIFEQYCTLESSTNNNFPSLNSPSTVSFSPNNSPVSKLQSKPNVFSSQNSLEIVDESLENKSFLTLNDDELRHKIRELESAMLGHDTDILDTY--DTIIPEESDSFL 157
BLAST of GT621792 vs. TrEMBL
Match: B9SST2_RICCO (Chitin-inducible gibberellin-responsive protein, putative OS=Ricinus communis GN=RCOM_0047210 PE=4 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.144e-19 Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = 3 Query: 300 PIQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSS-------------------NNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGE-DVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 P++ +SY + N+NL+ Y SD+GS + S + +Q+S L SS N S +S+ +S+SY DS E + S + E + H K+RELE AMLG D +DVYN M ++ S+ + E EKW +M+ +SR DLKEVL+ CA+A+ ND+ T E Sbjct: 20 PVRPRESYHWHSNQNLDQYPMSDDGSQEMHLSAETFDQHSTLESSSGTGGYPVQTSPSTASFSPNESVISQPNSQSYILDQHDSSENTSGSPDREAYVIH-------KLRELETAMLGPADDLDVYNI--MTQDGSNQITSEEEKWKFLMETVSRRDLKEVLYACAQAIDSNDMLTVE 188
BLAST of GT621792 vs. TrEMBL
Match: D7T879_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_90.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037777001 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.146e-19 Identity = 66/175 (37.71%), Postives = 99/175 (56.57%), Query Frame = 3 Query: 255 RKHKMSYESDMFSIDPI-QNLDSYCFLPNENLENYSSSDNGSHL-TYPSFQALEQYSALGSSNNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 +KH +S S F P+ Q+ F E Y + ++ S ++P + + S S SP S+ S++Y S E + S + CLT + ++L HK+RELE AMLG D D+ + +++I E + + LE EKW +MM++ISRGDLKEVL +CAKAV++NDI E Sbjct: 5 QKHGISGRSGSFYSQPVPQDDQGMHFSGPTYCEQYGTHESSSATGSFPIYNSPSTVSF--SPEGSPASQQDSQTYPSDQLHSPENGHGSPISGSCLTDDVNELRHKLRELETAMLGPDS-DILDVHEVIPRELNKISLEREKWKQMMEVISRGDLKEVLVSCAKAVADNDILRAE 176
BLAST of GT621792 vs. TrEMBL
Match: B9IAQ7_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS54 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.536e-17 Identity = 62/181 (34.25%), Postives = 95/181 (52.49%), Query Frame = 3 Query: 279 SDMFSIDPIQNLDSYCFLPNENLEN--YSS-SDNGSHLTYPS----FQALEQYSALGS-------------SNNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDI 761 S F P+Q +++YC + L+ YSS S G+ T P+ + LE SA GS N SP+S+ S+SY+ + S + + S + C+T + D HK+RELE M G D + + + + ++ LE + W ++M +ISRGDLK+VL CAKAVS+ND+ Sbjct: 13 SSRFLYQPMQEVETYCKPQSRTLDRQIYSSGSTQGTPFTIPNSHEQYCTLESSSANGSYAAYNSPSTVSFSPNGSPLSQQESQSYSLEPRHSPDNASGSPLSGSCITDDAHDFSHKLRELETVMFGPDSDIIDSIENALESGTNIESLEMDSWRQIMDVISRGDLKQVLIACAKAVSDNDL 193
BLAST of GT621792 vs. TrEMBL
Match: B9GJX2_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS53 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.784e-16 Identity = 64/186 (34.41%), Postives = 95/186 (51.08%), Query Frame = 3 Query: 255 RKHKMSYESDMFSIDPIQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYS-------------ALGSSNNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 +K +S S + P+Q +SYC+ P +N++ S + S +T + LE S A S N S VS+ +S+SY QDS E S +E +TH K+RELE AMLG D ++ + + ++ EAEKW +++M+SRGDLKE L TCA A++ D+ T E Sbjct: 5 QKKTISDGSRRYGDQPMQYQESYCWPPIQNIDAGSQGTHLSAMTSDQYCTLESSSETSAYPVHNSPSTASFSPNESVVSQPNSQSYPSDLQDSSENACGSPTSESYVTH-------KLRELETAMLGPDSDNLDMHSMTAMPGPNQIVSEAEKWKFLVEMMSRGDLKEALCTCALAIANGDMFTVE 183
BLAST of GT621792 vs. TrEMBL
Match: A5ATM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004660 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.438e-15 Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 531 CLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 CLT + ++L HK+RELE AMLG D D+ + +++I E + + LE EKW +MM++ISRGDLKEVL +CAKAV++NDI E Sbjct: 15 CLTDDVNELRHKLRELETAMLGPDS-DILDVHEVIPRELNKISLEREKWKQMMEVISRGDLKEVLVSCAKAVADNDILRAE 94
BLAST of GT621792 vs. TrEMBL
Match: B9T6K1_RICCO (Chitin-inducible gibberellin-responsive protein, putative OS=Ricinus communis GN=RCOM_1120410 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.217e-14 Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 300 PIQNLDSYCFLPNENLEN---YSSSDNGSHLTYPSFQALEQYSALGSS-------------------NNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDI 761 P+Q ++YC + L++ Y+ S +HL+ P+ A +QY L SS N SPVS+ S+SY S + S + C+T + +D K+RELE +LG D + + + S E + W +MM+ ISRGDLK VL CAKAVS+ND+ Sbjct: 20 PMQEFEAYCMPQFQTLDHQLRYNGSSQRTHLSIPN--ARDQYCTLESSSANGSYPIYNSPSTVSLSPNGSPVSQQESQSYPPDLHHSPDNNYGSPISGSCITDDVNDFRSKLRELETDLLGPDYGFMESIESNFQNGSSIKSPEMDIWRQMMEAISRGDLKHVLIACAKAVSDNDL 193
BLAST of GT621792 vs. TrEMBL
Match: C0Z2I8_ARATH (AT1G50600 protein OS=Arabidopsis thaliana GN=AT1G50600 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.806e-11 Identity = 58/183 (31.69%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 255 RKHKMSYESDMFSIDP---------IQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSSNNSPVSKLHSKSYAFTSQDSLEIINNS-LENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 +KH + S MF P +Q DSYC L SSS SH + ++ SSN SP+S+ ++ + + + S E NNS L N+ +L +++LE AM+ DV + YN+ ++ + + + M+MISRGDLK VL+ CAKAV D+E T+ Sbjct: 5 QKHMIQEGSSMFYHQPSSVKQMDLSVQTFDSYCTLE-------SSSGTKSHPCLNNKNNSSSTTSF-SSNESPISQANNNNLSRFNNHSPEENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDNSYNNQGGFGQQHGVV---SSAMYRSMEMISRGDLKGVLYECAKAVENYDLEMTD 176
BLAST of GT621792 vs. TrEMBL
Match: D7KGQ4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474191 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.027e-10 Identity = 51/160 (31.87%), Postives = 81/160 (50.62%), Query Frame = 3 Query: 303 IQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGS--SNNSPVSKLHSKSYAFTSQDSLEIINNS-LENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 +Q DSYC L SSS SH P + S+ S SN SP+S+ ++ + + + S + NNS L +N+ +L +++LE AM+ D+ + +N ++ + + + M+MISRGDLK VL+ CAKAV D+E T+ Sbjct: 5 VQTFDSYCTLE-------SSSGTKSH---PCLNNINNSSSTTSFSSNESPISQANNNNLSRFNNHSPDDNNNSPLSGSSATNNNETELSLMLKDLETAMMEPDLDNSFNHQGGFGQQHRVV---SSAMYRAMEMISRGDLKGVLYECAKAVENYDLEMTD 151
BLAST of GT621792 vs. TrEMBL
Match: Q8S5N0_ORYSJ (Putative SCARECROW gene regulator-like OS=Oryza sativa subsp. japonica GN=OJ1003C07.9 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.430e-9 Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 3 Query: 336 NENLENYSSSDNGSHLTYPSFQALEQ-YSALGSSNNSPVSKLHSKSYA----------FTSQDS-LEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 N +Y+SSD+GS S QA E Y L SS+ + HS + + + DS + NS + C+T D L K+RELENA+LG ++ Y+ + + + ++ E W +++ I+ GDLK+V+ C KAV+END+ TE Sbjct: 21 NHQDAHYASSDDGSQKIGSSPQAFEAPYCTLESSSANGAHPAHSSASSHSISPISGSPLSHHDSHSDHTYNSPPSASCVTEITD-LQIKLRELENAILGPELDIAYDSPESALQPN--IMATPENWRQLLG-INTGDLKQVIIACGKAVAENDVRLTE 174
BLAST of GT621792 vs. SwissProt
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.830e-12 Identity = 58/183 (31.69%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 255 RKHKMSYESDMFSIDP---------IQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSSNNSPVSKLHSKSYAFTSQDSLEIINNS-LENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 +KH + S MF P +Q DSYC L SSS SH + ++ SSN SP+S+ ++ + + + S E NNS L N+ +L +++LE AM+ DV + YN+ ++ + + + M+MISRGDLK VL+ CAKAV D+E T+ Sbjct: 76 QKHMIQEGSSMFYHQPSSVKQMDLSVQTFDSYCTLE-------SSSGTKSHPCLNNKNNSSSTTSF-SSNESPISQANNNNLSRFNNHSPEENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDNSYNNQGGFGQQHGVV---SSAMYRSMEMISRGDLKGVLYECAKAVENYDLEMTD 247
BLAST of GT621792 vs. SwissProt
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.603e-8 Identity = 50/178 (28.09%), Postives = 78/178 (43.82%), Query Frame = 3 Query: 330 LPNENLENYSSSDNGSHLTYP-------------------------SFQALEQYSALGSSNNSPVSKLHS-KSYAFTSQDSLEIINNSLENEL---------CLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSEND 758 +P++NL+ + SDN H +P QA L SS + + S S +FT++ + ++ C+T + +DL K+++LE MLG D V N + ++ L LE EKW +MM I RG+LKE+L CA+AV E + Sbjct: 16 IPSQNLKQFQYSDNPQHPCHPYRAPSDTHVVPHHYGLKSHSPDAGYESQATPNKYTLDSSEGAGCMRHDSPSSQSFTTRSGSPLSQEDSHSDSTDGSPVGASCVTEDPNDLKQKLKDLEAVMLGPDSEIV---NSLENSVANQLSLEPEKWVRMMG-IPRGNLKELLIACARAVEEKN 189
BLAST of GT621792 vs. SwissProt
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.039e-7 Identity = 47/155 (30.32%), Postives = 69/155 (44.52%), Query Frame = 3 Query: 300 PIQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSSNNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYND-NDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDI 761 P Q L++Y F PN + N S F LE + ++ P + L + +Y T C+T +D HKIRE+E M+G D +D+ D D + E W ++ ISR DL+ L +CAKA+SEND+ Sbjct: 5 PRQELEAYYFEPNSVEKLRYLPVNNSR---KRFCTLEPFP-----DSPPYNALSTATYDDTCGS-------------CVTDELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQ---EINGWRSTLEAISRRDLRADLVSCAKAMSENDL 135
BLAST of GT621792 vs. TAIR peptide
Match: AT1G50600.1 (| Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18739547 REVERSE LENGTH=597) HSP 1 Score: 73.1738 bits (178), Expect = 1.827e-13 Identity = 58/183 (31.69%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 255 RKHKMSYESDMFSIDP---------IQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSSNNSPVSKLHSKSYAFTSQDSLEIINNS-LENELCLTHNQDDLWHKIRELENAMLGEDVVDVYNDNDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDIETTE 773 +KH + S MF P +Q DSYC L SSS SH + ++ SSN SP+S+ ++ + + + S E NNS L N+ +L +++LE AM+ DV + YN+ ++ + + + M+MISRGDLK VL+ CAKAV D+E T+ Sbjct: 76 QKHMIQEGSSMFYHQPSSVKQMDLSVQTFDSYCTLE-------SSSGTKSHPCLNNKNNSSSTTSF-SSNESPISQANNNNLSRFNNHSPEENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDNSYNNQGGFGQQHGVV---SSAMYRSMEMISRGDLKGVLYECAKAVENYDLEMTD 247
BLAST of GT621792 vs. TAIR peptide
Match: AT5G48150.2 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490) HSP 1 Score: 57.3806 bits (137), Expect = 1.037e-8 Identity = 47/155 (30.32%), Postives = 69/155 (44.52%), Query Frame = 3 Query: 300 PIQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSSNNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYND-NDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDI 761 P Q L++Y F PN + N S F LE + ++ P + L + +Y T C+T +D HKIRE+E M+G D +D+ D D + E W ++ ISR DL+ L +CAKA+SEND+ Sbjct: 5 PRQELEAYYFEPNSVEKLRYLPVNNSR---KRFCTLEPFP-----DSPPYNALSTATYDDTCGS-------------CVTDELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQ---EINGWRSTLEAISRRDLRADLVSCAKAMSENDL 135
BLAST of GT621792 vs. TAIR peptide
Match: AT5G48150.1 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490) HSP 1 Score: 57.3806 bits (137), Expect = 1.037e-8 Identity = 47/155 (30.32%), Postives = 69/155 (44.52%), Query Frame = 3 Query: 300 PIQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALEQYSALGSSNNSPVSKLHSKSYAFTSQDSLEIINNSLENELCLTHNQDDLWHKIRELENAMLGEDVVDVYND-NDMIREESDPLLLEAEKWNKMMQMISRGDLKEVLFTCAKAVSENDI 761 P Q L++Y F PN + N S F LE + ++ P + L + +Y T C+T +D HKIRE+E M+G D +D+ D D + E W ++ ISR DL+ L +CAKA+SEND+ Sbjct: 5 PRQELEAYYFEPNSVEKLRYLPVNNSR---KRFCTLEPFP-----DSPPYNALSTATYDDTCGS-------------CVTDELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQ---EINGWRSTLEAISRRDLRADLVSCAKAMSENDL 135 The following BLAST results are available for this feature:
BLAST of GT621792 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT621792 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 3
BLAST of GT621792 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT621792 ID=GT621792; Name=GT621792; organism=Lens culinaris; type=EST; length=774bpback to top |