GT621947

EST Overview


Name	GT621947
Unique Name	GT621947
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	562

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT621947 vs. TrEMBL
Match: D5A9J3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.297e-25
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ETEN+ YVYQP++ALYLLLVTNKQSNILEDL+TLR+LSK+VP+YS SLDEEGI R AFELI
Sbjct:   44 KQHTYVETENVRYVYQPMEALYLLLVTNKQSNILEDLETLRVLSKIVPEYSASLDEEGICRMAFELI 110

HSP 2 Score: 35.039 bits (79), Expect = 2.297e-25
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKE+VTI Q
Sbjct:  111 FAFDEVISLGHKESVTIAQ 129

[Close]

BLAST of GT621947 vs. TrEMBL
Match: A9RMY5_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204046 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.194e-24
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ET+N+ YVYQP+++LYLLLVTNKQSNILED DTL+LLSKLVP+Y  SLDEEGI + AFE+I
Sbjct:   44 KQHTYVETDNVRYVYQPMESLYLLLVTNKQSNILEDRDTLQLLSKLVPEYVPSLDEEGICKMAFEII 110

HSP 2 Score: 36.965 bits (84), Expect = 9.194e-24
Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKENVTI Q
Sbjct:  111 FAFDEVISLGHKENVTIAQ 129

[Close]

BLAST of GT621947 vs. TrEMBL
Match: D7LY84_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908393 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.196e-23
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ETEN+ YVYQPI+AL+LLLVT KQSNILEDL TL LLSKLVP+YS SLDEEGI R +FELI
Sbjct:   44 KQHTYIETENVRYVYQPIEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELI 110

HSP 2 Score: 34.6538 bits (78), Expect = 1.196e-23
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKE+VT+ Q
Sbjct:  111 FAFDEVISLGHKESVTVAQ 129

[Close]

BLAST of GT621947 vs. TrEMBL
Match: B9DGK9_ARATH (AT5G05010 protein OS=Arabidopsis thaliana GN=At5g05010 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.196e-23
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ETEN+ YVYQPI+AL+LLLVT KQSNILEDL TL LLSKLVP+YS SLDEEGI R +FELI
Sbjct:   44 KQHTYIETENVRYVYQPIEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELI 110

HSP 2 Score: 34.6538 bits (78), Expect = 1.196e-23
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKE+VT+ Q
Sbjct:  111 FAFDEVISLGHKESVTVAQ 129

[Close]

BLAST of GT621947 vs. TrEMBL
Match: A9RI77_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159195 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.197e-23
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ET+N+ YVYQP+++LYLLLVTNKQSNILED DTL+ LSKLVP+Y  SLDEEG+ R AFELI
Sbjct:   21 KQHTYVETDNVRYVYQPMESLYLLLVTNKQSNILEDRDTLQTLSKLVPEYVPSLDEEGVCRMAFELI 87

HSP 2 Score: 36.965 bits (84), Expect = 1.197e-23
Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKENVTI Q
Sbjct:   88 FAFDEVISLGHKENVTIAQ 106

[Close]

BLAST of GT621947 vs. TrEMBL
Match: A8I901_CHLRE (Delta-cop OS=Chlamydomonas reinhardtii GN=COPD1 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.027e-23
Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ETEN+ Y+YQP++ LYLLL+TNKQSNILEDL+TLRLLSKLVP++S SL+EE +   AFELI
Sbjct:   44 KQHTYVETENVRYIYQPMEGLYLLLITNKQSNILEDLETLRLLSKLVPEFSQSLEEESVAGKAFELI 110

HSP 2 Score: 36.5798 bits (83), Expect = 2.027e-23
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKEN+T+ Q
Sbjct:  111 FAFDEVISLGHKENITVQQ 129

[Close]

BLAST of GT621947 vs. TrEMBL
Match: A9RGU9_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_104542 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.465e-23
Identity = 49/67 (73.13%), Postives = 59/67 (88.06%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ET+++ YVYQP+++LYLLLVTNKQSNILED +TL+LLSK+VP+Y  SLDEEGI R AFELI
Sbjct:   44 KQHTYVETDSVRYVYQPMESLYLLLVTNKQSNILEDRETLQLLSKIVPEYVPSLDEEGICRMAFELI 110

HSP 2 Score: 36.965 bits (84), Expect = 4.465e-23
Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKENVTI Q
Sbjct:  111 FAFDEVISLGHKENVTIAQ 129

[Close]

BLAST of GT621947 vs. TrEMBL
Match: B7EGT8_ORYSJ (cDNA clone:J023027K10, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.891e-22
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH Y ETEN+ YVYQPI+ALYLLL+TNKQSNILEDLDTLRLLSKL+P+Y+ SLDEEG+ + AFEL+   + +  LG ++
Sbjct:   44 KQHTYVETENVRYVYQPIEALYLLLITNKQSNILEDLDTLRLLSKLIPEYAPSLDEEGVCKAAFELLFAFIEAISLGNKE 123

[Close]

BLAST of GT621947 vs. TrEMBL
Match: B8AWD9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19411 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.388e-22
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH Y ETEN+ YVYQPI+ LYLLL+TNKQSNILEDLDTLRLLSKLVP+YS SLDEEG+ + AFELI     +  LG ++
Sbjct:  128 KQHTYVETENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAICLGNKE 207

[Close]

BLAST of GT621947 vs. TrEMBL
Match: B9FNT1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_18003 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.343e-22
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH Y ETEN+ YVYQPI+ LYLLL+TNKQSNILEDLDTLRLLSKLVP+YS SLDEEG+ + AFELI     +  LG ++
Sbjct:  298 KQHTYVETENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAISLGNKE 377

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD_ARATH (Coatomer subunit delta OS=Arabidopsis thaliana GN=At5g05010 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 8.919e-25
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ETEN+ YVYQPI+AL+LLLVT KQSNILEDL TL LLSKLVP+YS SLDEEGI R +FELI
Sbjct:   44 KQHTYIETENVRYVYQPIEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELI 110

HSP 2 Score: 34.6538 bits (78), Expect = 8.919e-25
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKE+VT+ Q
Sbjct:  111 FAFDEVISLGHKESVTVAQ 129

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD3_ORYSJ (Coatomer subunit delta-3 OS=Oryza sativa subsp. japonica GN=Os01g0833700 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 3.663e-23
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH Y ETEN+ YVYQPI+ALYLLL+TNKQSNILEDLDTLRLLSKL+P+Y+ SLDEEG+ + AFEL+   + +  LG ++
Sbjct:   44 KQHTYVETENVRYVYQPIEALYLLLITNKQSNILEDLDTLRLLSKLIPEYAPSLDEEGVCKAAFELLFAFIEAISLGNKE 123

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD2_ORYSJ (Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica GN=Os05g0311000 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.784e-23
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH Y ETEN+ YVYQPI+ LYLLL+TNKQSNILEDLDTLRLLSKLVP+YS SLDEEG+ + AFELI     +  LG ++
Sbjct:   44 KQHTYVETENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAICLGNKE 123

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD1_ORYSJ (Coatomer subunit delta-1 OS=Oryza sativa subsp. japonica GN=Os05g0310800 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.248e-23
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH Y ETEN+ YVYQPI+ LYLLL+TNKQSNILEDLDTLRLLSKLVP+YS SLDEEG+ + AFELI     +  LG ++
Sbjct:   44 KQHTYVETENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAISLGNKE 123

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD_DICDI (Coatomer subunit delta OS=Dictyostelium discoideum GN=copd PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.216e-18
Identity = 42/67 (62.69%), Postives = 57/67 (85.07%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            +QH + ETEN+ YVYQP+++LY++L+TNK SNILEDL+TL LL+KLVP+YS + DE  I ++AFELI
Sbjct:   44 RQHTFIETENIRYVYQPLESLYIVLITNKNSNILEDLETLHLLAKLVPEYS-NFDEYDISKNAFELI 109

HSP 2 Score: 28.4906 bits (62), Expect = 2.216e-18
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            F FDE I++G+KE VT+ Q
Sbjct:  110 FTFDEVIAMGYKERVTLQQ 128

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD_RAT (Coatomer subunit delta OS=Rattus norvegicus GN=Arcn1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH + ETE++ YVYQP++ LY++L+T K SNILEDL+TLRL S+++P+Y  +L+E  I  H F+LI        LG R+
Sbjct:   44 KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRE 123

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD_PONAB (Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH + ETE++ YVYQP++ LY++L+T K SNILEDL+TLRL S+++P+Y  +L+E  I  H F+LI        LG R+
Sbjct:   44 KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRE 123

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD_MOUSE (Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH + ETE++ YVYQP++ LY++L+T K SNILEDL+TLRL S+++P+Y  +L+E  I  H F+LI        LG R+
Sbjct:   44 KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRE 123

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD_HUMAN (Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH + ETE++ YVYQP++ LY++L+T K SNILEDL+TLRL S+++P+Y  +L+E  I  H F+LI        LG R+
Sbjct:   44 KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRE 123

[Close]

BLAST of GT621947 vs. SwissProt
Match: COPD_CHICK (Coatomer subunit delta OS=Gallus gallus GN=ARCN1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = -3

Query:   18 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELISRLMNSSLLGTRK 254
            KQH + ETE++ YVYQP++ LY++L+T K SNILEDL+TLRL S+++P+Y  +L+E  I  H F+LI        LG R+
Sbjct:   44 KQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRE 123

[Close]

BLAST of GT621947 vs. TAIR peptide
Match: AT5G05010.2 (| Symbols: | clathrin adaptor complexes medium subunit family protein | chr5:1477137-1479872 FORWARD LENGTH=527)

HSP 1 Score: 99.3673 bits (246), Expect = 9.520e-26
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ETEN+ YVYQPI+AL+LLLVT KQSNILEDL TL LLSKLVP+YS SLDEEGI R +FELI
Sbjct:   44 KQHTYIETENVRYVYQPIEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELI 110

HSP 2 Score: 34.6538 bits (78), Expect = 9.520e-26
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKE+VT+ Q
Sbjct:  111 FAFDEVISLGHKESVTVAQ 129

[Close]

BLAST of GT621947 vs. TAIR peptide
Match: AT5G05010.1 (| Symbols: | clathrin adaptor complexes medium subunit family protein | chr5:1477137-1479872 FORWARD LENGTH=527)

HSP 1 Score: 99.3673 bits (246), Expect = 9.520e-26
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = -3

Query:   57 KQHIY-ETENMGYVYQPIKALYLLLVTNKQSNILEDLDTLRLLSKLVPKYSYSLDEEGIYRHAFELI 254
            KQH Y ETEN+ YVYQPI+AL+LLLVT KQSNILEDL TL LLSKLVP+YS SLDEEGI R +FELI
Sbjct:   44 KQHTYIETENVRYVYQPIEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELI 110

HSP 2 Score: 34.6538 bits (78), Expect = 9.520e-26
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -2

Query:    1 FAFDEFISLGHKENVTIYQ 57
            FAFDE ISLGHKE+VT+ Q
Sbjct:  111 FAFDEVISLGHKESVTVAQ 129

[Close]

BLAST of GT621947 vs. TAIR peptide
Match: AT2G26890.1 (| Symbols: GRV2, KAM2 | DNAJ heat shock N-terminal domain-containing protein | chr2:11462327-11473841 REVERSE LENGTH=2554)

HSP 1 Score: 43.8986 bits (102), Expect = 2.288e-7
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 2

Query:  269 IRHFSGCRGLVQFAEETQMFAIEFSNGCPIHV 364
            +R  S    LV+FAEE QMFAIEFS+GCP+ V
Sbjct:  327 VRPLSSVSSLVRFAEEPQMFAIEFSDGCPVLV 358

HSP 2 Score: 27.7202 bits (60), Expect = 2.288e-7
Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  438 VYASINHDSLLAVVRNVLRTE 500
            VYASI+ D+LLA + + L+TE
Sbjct:  358 VYASISRDNLLAAILDTLQTE 378

The following BLAST results are available for this feature:

BLAST of GT621947 vs. TrEMBL
BLAST of GT621947 vs. SwissProt
BLAST of GT621947 vs. TAIR peptide

BLAST of GT621947 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D5A9J3_PICSI	2.297e-25	80.60	Putative uncharacterized protein OS=Picea sitchens...	[more]
A9RMY5_PHYPA	9.194e-24	74.63	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
D7LY84_ARALY	1.196e-23	79.10	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9DGK9_ARATH	1.196e-23	79.10	AT5G05010 protein OS=Arabidopsis thaliana GN=At5g0...	[more]
A9RI77_PHYPA	1.197e-23	74.63	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
A8I901_CHLRE	2.027e-23	71.64	Delta-cop OS=Chlamydomonas reinhardtii GN=COPD1 PE...	[more]
A9RGU9_PHYPA	4.465e-23	73.13	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
B7EGT8_ORYSJ	4.891e-22	67.50	cDNA clone:J023027K10, full insert sequence OS=Ory...	[more]
B8AWD9_ORYSI	6.388e-22	70.00	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9FNT1_ORYSJ	8.343e-22	70.00	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GT621947 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
COPD_ARATH	8.919e-25	79.10	Coatomer subunit delta OS=Arabidopsis thaliana GN=...	[more]
COPD3_ORYSJ	3.663e-23	67.50	Coatomer subunit delta-3 OS=Oryza sativa subsp. ja...	[more]
COPD2_ORYSJ	4.784e-23	70.00	Coatomer subunit delta-2 OS=Oryza sativa subsp. ja...	[more]
COPD1_ORYSJ	6.248e-23	70.00	Coatomer subunit delta-1 OS=Oryza sativa subsp. ja...	[more]
COPD_DICDI	2.216e-18	62.69	Coatomer subunit delta OS=Dictyostelium discoideum...	[more]
COPD_RAT	3.672e-15	50.00	Coatomer subunit delta OS=Rattus norvegicus GN=Arc...	[more]
COPD_PONAB	3.672e-15	50.00	Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE...	[more]
COPD_MOUSE	3.672e-15	50.00	Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE...	[more]
COPD_HUMAN	3.672e-15	50.00	Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE...	[more]
COPD_CHICK	3.672e-15	50.00	Coatomer subunit delta OS=Gallus gallus GN=ARCN1 P...	[more]

BLAST of GT621947 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G05010.2	9.520e-26	79.10	\| Symbols: \| clathrin adaptor complexes medium su...	[more]
AT5G05010.1	9.520e-26	79.10	\| Symbols: \| clathrin adaptor complexes medium su...	[more]
AT2G26890.1	2.288e-7	62.50	\| Symbols: GRV2, KAM2 \| DNAJ heat shock N-terminal...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 28..41 score
None	No IPR available	GENE3D	3.30.450.60	no description	coord: 26..97 score: 8.2
None	No IPR available	PANTHER	PTHR10121	COATOMER DELTA SUBUNIT	coord: 26..95 score: 1
IPR011012	Longin-like	SUPERFAMILY	64356	SNARE-like	coord: 32..97 score: 3.7

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT621947 ID=GT621947; Name=GT621947; organism=Lens culinaris; type=EST; length=562bp
TTGATATATAGTCACATTTTCCTTGTGCCCAAGAGAGATGAATTCATCAA
ACGCGAAATCAGCTCAAAGGCATGTCTGTAGATACCCTCTTCGTCAAGGG
AATAAGAATATTTGGGGACAAGTTTGGAGAGAAGCCTCAGAGTATCCAAA
TCTTCCAGTATGTTGCTCTGTTTATTTGTTACAAGTAGCAGGTATAGAGC
TTTTATTGGCTGGTAAACATAGCCCATATTCTCAGTTTCATATATGTGTT
GTTTTTTTTCCTGGTAGAATCCGGCACTTCTCTGGTTGTCGTGGTCTTGT
TCAGTTTGCTGAAGAAACTCAGATGTTTGCAATTGAATTCAGCAATGGAT
GCCCCATCCATGTAATTCTTTGTGATGCTATTCTATTCGTACATCCTTAT
AGTATTAATTTTCTCATGTATTTACCATGAATTTTAGGTTTACGCAAGCA
TAAATCATGATAGTTTACTTGCAGTAGTCCGTAATGTGTTGCGAACTGAA
GTAGGTATCCTTCTTGGTTAAGAATTGTTATGTGATCGTATTTTATGTGT
ACATTGAATCAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom_sf

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