GT621954
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT621954 vs. TrEMBL
Match: D5FFG9_MEDTR (MYB transcription factor MYB39 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.324e-40 Identity = 86/114 (75.44%), Postives = 89/114 (78.07%), Query Frame = 2 Query: 2 NVTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYY---QQFGFSDCITSPSGLFPQMDFNNSMEPNTPWIQGDTSDNFWNVENMLLFQQLNDNM 334 +V QS+T ENSSNGA AASSDSFGTQVSPIS+LTQDYY DYY QQFGF DCITSPSGLFPQMDF NSMEPNTPWIQGDTSDNFWNVENMLLFQ N NM Sbjct: 217 HVAQSYTPENSSNGAAAASSDSFGTQVSPISELTQDYYNVPVGSNNNNNPNSDYYQQAQQFGFFDCITSPSGLFPQMDF-NSMEPNTPWIQGDTSDNFWNVENMLLFQHPNHNM 329
BLAST of GT621954 vs. TrEMBL
Match: C6T8B5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.335e-24 Identity = 71/119 (59.66%), Postives = 83/119 (69.75%), Query Frame = 2 Query: 2 NVTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQ--QFGFSD-CITSPSGLFPQ-MDFNNSMEPNTPW--IQGDTSDNFWNVENMLLFQQ--LNDNM 334 +VTQS+T ENSS GA+ SSDSFGTQVS ISDLT+ YY DYYQ Q +SD CITSPSGLFPQ +DF SM+PNTPW GD+SD+FWNVE+ML +Q +NDNM Sbjct: 211 HVTQSYTPENSSTGAS--SSDSFGTQVSAISDLTE-YYTVTVSGNNNNTNSADYYQPSQISYSDSCITSPSGLFPQGLDF-QSMDPNTPWNMQSGDSSDSFWNVESMLFLEQQLMNDNM 325
BLAST of GT621954 vs. TrEMBL
Match: Q0PJF5_SOYBN (MYB transcription factor MYB102 (Fragment) OS=Glycine max GN=MYB102 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.122e-18 Identity = 65/121 (53.72%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 2 NVTQSFTR-ENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQQFGFSD----CITSPSG-LFPQMDFNNSMEPNTPWIQ--GDTSDNFWNVENMLLFQQ--LNDNM 334 +VTQS+T ENSS G T SDSFGTQVS ISDLT+ Y DYYQ S+ CITSPSG LFPQ SM+PNTPW GD+SDNFW+VE+ML +Q +NDNM Sbjct: 79 HVTQSYTTPENSSTGGTR--SDSFGTQVSTISDLTEYY------SVPENTNSADYYQPSQISNYSDNCITSPSGFLFPQGLDLQSMDPNTPWNMQSGDSSDNFWDVESMLFLEQQLMNDNM 191
BLAST of GT621954 vs. TrEMBL
Match: B9HIK1_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB212 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.214e-16 Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 2 NVTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQ--QFGFSDCITSPSGLFPQ-MDFNNSMEPNTPW--IQGDTSDNFWNVENMLLFQQLNDNM 334 +VTQS+T ENSS TAASSDSF TQVSP+SDLT DYY DY+Q Q G+S+ + SP G F +DF + W GDTSDN WN+E++ QQ +N+ Sbjct: 213 HVTQSYTPENSS---TAASSDSFATQVSPVSDLTTDYY----NIPVNRNTNPDYFQAGQVGYSESMISPPGFFNHGLDFQAMEHSSNQWPMDSGDTSDNMWNLEDIWFLQQQLNNL 321
BLAST of GT621954 vs. TrEMBL
Match: B9HX62_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB036 PE=4 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.162e-15 Identity = 56/117 (47.86%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 2 NVTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQ--QFGFSDCITSPSGLFPQ-MDFNNSMEPNTPWI--QGDTSDNFWNVENM-LLFQQLNDNM 334 +VT S+T ENSS TAASSDSF QVSP+SDLT DYY DY+Q Q G+S+ + SP+G F Q +DF + W+ GDTSDN WN E++ L QQ+N NM Sbjct: 207 HVTPSYTPENSS---TAASSDSFAAQVSPVSDLTTDYY----YIPVNHNPNPDYFQADQGGYSESMISPAGYFNQGLDFQAMEHNSNQWLMESGDTSDNLWNPEDIWFLQQQMNYNM 316
BLAST of GT621954 vs. TrEMBL
Match: D7SYH2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034943001 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.284e-14 Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 2 Query: 5 VTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQ--QFGFSDCITSPSGLFPQ-MDFNNSMEPNTPWIQGD---TSDNFWNVENM 304 V+ +T ENSS TAASSDSFG QVSP+SDLT+ Y D++Q Q G++D + SPSG F Q +DF SMEPNT W +G T+DN WNVE++ Sbjct: 200 VSTGYTPENSS---TAASSDSFGAQVSPVSDLTEIY-----NFPVSDNQNPDFFQTGQVGYTDSLISPSGYFNQGLDF-QSMEPNTQWYEGGDTATADNLWNVEDI 296
BLAST of GT621954 vs. TrEMBL
Match: C3W4Q3_VITVI (R2R3 transcription factor MYB108-like protein 1 OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.284e-14 Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 2 Query: 5 VTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQ--QFGFSDCITSPSGLFPQ-MDFNNSMEPNTPWIQGD---TSDNFWNVENM 304 V+ +T ENSS TAASSDSFG QVSP+SDLT+ Y D++Q Q G++D + SPSG F Q +DF SMEPNT W +G T+DN WNVE++ Sbjct: 200 VSTGYTPENSS---TAASSDSFGAQVSPVSDLTEIY-----NFPVSDNQNPDFFQTDQVGYTDSLISPSGYFNQGLDF-QSMEPNTQWYEGGDTATADNLWNVEDI 296
BLAST of GT621954 vs. TrEMBL
Match: A5B5N9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029107 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.284e-14 Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 2 Query: 5 VTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQ--QFGFSDCITSPSGLFPQ-MDFNNSMEPNTPWIQGD---TSDNFWNVENM 304 V+ +T ENSS TAASSDSFG QVSP+SDLT+ Y D++Q Q G++D + SPSG F Q +DF SMEPNT W +G T+DN WNVE++ Sbjct: 200 VSTGYTPENSS---TAASSDSFGAQVSPVSDLTEIY-----NFPVSDNQNPDFFQTGQVGYTDSLISPSGYFNQGLDF-QSMEPNTQWYEGGDTATADNLWNVEDI 296
BLAST of GT621954 vs. TrEMBL
Match: B9RZV9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1002070 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.244e-9 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 2 NVTQSFTRENSSNGATAASSDSFGTQVSPISDLTQDYYXXXXXXXXXXXXXXDYYQ--QFGFSDCITSPSGLFPQ-MDFNNSMEPNT---PWIQ-GDTSDNFWNVENM 304 +VT S+T +S+ TAASSDSFGTQVSP+SD+T + +Y+Q Q +S+ + SPSG F Q +DF +ME N W GDT+DN W+V+++ Sbjct: 70 HVTPSYTTPETSS--TAASSDSFGTQVSPVSDMTNNNDHYSISVNHNANPDTNYFQSGQVCYSESMISPSGYFNQGLDF-QAMEQNNINQLWADGGDTTDNLWSVDDI 174 The following BLAST results are available for this feature:
BLAST of GT621954 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 9
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT621954 ID=GT621954; Name=GT621954; organism=Lens culinaris; type=EST; length=512bpback to top |