GT622241

EST Overview
NameGT622241
Unique NameGT622241
TypeEST
OrganismLens culinaris (lentil)
Sequence length796
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT622241 vs. TrEMBL
Match: C6TB93_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.156e-39
Identity = 107/193 (55.44%), Postives = 124/193 (64.25%), Query Frame = 3
Query:    3 KTKKEAEIKAARTALLAIQTNASQASQNQFGH--LTVIPSRKRATDSV--ADEASXXXXXXXXXXXXXXXXXXQSRDKKPRIHTDNAGHGANINQGIESLASGNDESGIQETKSEAMLPSEAVKNSENGVLTNHHEKEMTIHHVKETLAGDGSFALNNQE-VFDNGKSTEFQSKEINLGNVVTEVSFAPNGDI 566
            KTKKEAEIKAARTALLAIQ++ASQASQ+Q GH  LTV+P RKRAT+SV  ADE S                   SRDK  +IHT+N G GANIN  +E+ AS N ESG+ E KSE    SEA  N ENGV  N+ E        KETLAG+   A+N+QE +F+NGKSTE  SKE NL  VVTE+    NG I
Sbjct:  151 KTKKEAEIKAARTALLAIQSSASQASQDQVGHPQLTVLPCRKRATESVAIADENSNPPKPKKARFKRKSSKRKPSRDKMGQIHTENLGIGANINHEVETHASVNGESGVLEKKSET-FTSEAANNFENGVSVNYQE--------KETLAGESFLAVNSQEGIFENGKSTELYSKENNLVTVVTELFSVSNGGI 334          
BLAST of GT622241 vs. TrEMBL
Match: B9RJY6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1039680 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.511e-10
Identity = 66/191 (34.55%), Postives = 86/191 (45.03%), Query Frame = 3
Query:    3 KTKKEAEIKAARTALLAIQTNASQASQNQFGH--LTVIPSRKRA--TDSVADEASXXXXXXXXXXXXXXXXXXQSRDKKPRIHTDNAGHGANINQGIESLASGNDESGIQETKSEAMLPSEAVKNSENGVLTNHHEKEMTIHHVKETLAGDGSFALNNQEVFDNGKSTEFQSKEINLGNVVTEVSFAPNGD 563
            KTKKEAEIKAARTALLAIQ +AS++S N  G+  LTVIP RKR   T +V +EA                    S +K      +  G+  +   G ES    ND S +Q T    +LP  +  NSE+G L     +       +ET    G+   +    F NG +      + N G     V    NGD
Sbjct:  152 KTKKEAEIKAARTALLAIQLSASESSHNSIGNCQLTVIPFRKRGAETAAVLEEAMNVPKAKKARFRKKTLKKKHSGNKVDHNQGETIGNKKDGQAGSES--DKNDASVVQGT-GHQLLPMLSTSNSEDGRLVPESSE-------RETTDVTGALVCHISGDFGNGFAATVNFDQSNHG-----VCAETNGD 327          
The following BLAST results are available for this feature:
BLAST of GT622241 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C6TB93_SOYBN1.156e-3955.44Putative uncharacterized protein OS=Glycine max PE... [more]
B9RJY6_RICCO2.511e-1034.55Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 52..69
score
NoneNo IPR availableSEGsegsegcoord: 21..34
score: NAcoord: 37..53
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT622241 ID=GT622241; Name=GT622241; organism=Lens culinaris; type=EST; length=796bp
CAAAAACAAAGAAGGAAGCAGAGATAAAAGCCGCAAGAACTGCTTTACTA
GCTATCCAGACAAATGCATCTCAGGCTTCTCAAAACCAGTTTGGCCATTT
GACTGTCATTCCATCCAGAAAAAGGGCAACAGATTCTGTCGCTGATGAGG
CTTCAAAAGCTCCAAAGCCTAAGAAAGCACGCTTTAAAAGGAAATTTCCC
AAGAGGAAGCAGTCTAGAGACAAGAAGCCTCGTATTCACACTGACAATGC
TGGCCATGGAGCAAATATCAATCAGGGGATAGAATCACTTGCAAGTGGTA
ATGATGAGTCTGGCATTCAGGAAACCAAATCTGAAGCAATGTTACCTTCA
GAAGCTGTGAAGAATTCTGAGAATGGAGTATTGACTAACCATCATGAGAA
AGAGATGACTATCCATCATGTAAAAGAGACTTTAGCTGGAGACGGGTCTT
TTGCTTTGAACAATCAAGAGGTTTTTGATAATGGGAAATCAACAGAATTT
CAATCCAAAGAGATTAATCTTGGGAATGTTGTTACCGAAGTGTCGTTTGC
ACCAAATGGAGACATACTGGTAAAGTGCGATGGGATGTTTGTGCCAAACG
GAAACATACCGGCAAAGAGCGATGGGATTTCTGCGCCAAATGGAGACATA
CCAGCAAATGGAGACATACTGGCAAAGAACAATGGGATGTTTGCGCCAAA
CGGAGACATACCAGCAAACGGAGACATGCTGGCAAAGAGTGATGGGATGT
TTGCGCCAAACGGGGACATACCACCAAAGAGCGATGGGGTGTTTGC
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