GT623071

EST Overview
NameGT623071
Unique NameGT623071
TypeEST
OrganismLens culinaris (lentil)
Sequence length639
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT623071 vs. TrEMBL
Match: C6T433_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.382e-53
Identity = 109/115 (94.78%), Postives = 111/115 (96.52%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME ITEGVNNININ SDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGL +EKKI TSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM
Sbjct:    1 MEGITEGVNNININISDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLTVEKKITTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 115          
BLAST of GT623071 vs. TrEMBL
Match: C6SVJ8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.166e-51
Identity = 109/124 (87.90%), Postives = 112/124 (90.32%), Query Frame = 2
Query:   68 IFRTGKDRSMEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            +F      +ME ITEGVNNINI  SDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNN LAIEKKI TSTVDIKDDSRGRPVQKAKIEI+LGKTE FDELM
Sbjct:    3 LFSHSHTTAMEAITEGVNNINI--SDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNELAIEKKITTSTVDIKDDSRGRPVQKAKIEILLGKTEKFDELM 124          
BLAST of GT623071 vs. TrEMBL
Match: C6T4F4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.500e-50
Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME ITEGVNNINI  SDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNN LA+EKKI TSTVDIKDDSRGRPVQKAKIEIVLGKT NFDELM
Sbjct:    1 MEDITEGVNNINI--SDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNRLAVEKKIRTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELM 113          
BLAST of GT623071 vs. TrEMBL
Match: D7TBZ6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015516001 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.970e-50
Identity = 102/115 (88.70%), Postives = 112/115 (97.39%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME ITEGVN++NI  +DS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVT+AEILKNNGLA+EKKIMTSTVD+KD+SRGRP+QKAKIEI+LGKTENFDELM
Sbjct:    1 MEEITEGVNSMNI--ADSHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKNNGLAVEKKIMTSTVDMKDESRGRPIQKAKIEILLGKTENFDELM 113          
BLAST of GT623071 vs. TrEMBL
Match: B9SEQ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0222390 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.018e-49
Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME ITEGVNNIN+   D +KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIE+KIMTSTVD+KD+SRGRPVQKAKIEI+LGKTENFDELM
Sbjct:    1 MEEITEGVNNINLAG-DLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIERKIMTSTVDMKDESRGRPVQKAKIEILLGKTENFDELM 114          
BLAST of GT623071 vs. TrEMBL
Match: D7U0Z4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017289001 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.471e-48
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME ITE VNNINI  SD +KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVT+AEILKNNGLA+EKKI TSTVD+KD+SRGRPVQKAKIEI+LGKT NFDELM
Sbjct:    1 MEEITEAVNNINI--SDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKNNGLAVEKKITTSTVDMKDESRGRPVQKAKIEILLGKTANFDELM 113          
BLAST of GT623071 vs. TrEMBL
Match: B9RP66_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0924420 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.531e-48
Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME +TEGVNN+NIN++ S KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVT+AEILKNNGLAIEKKIMTSTVD+++D+ GRPV KAKIEI+LGKTE FDELM
Sbjct:    1 MEAVTEGVNNMNINDA-SNKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKNNGLAIEKKIMTSTVDMREDTGGRPVPKAKIEILLGKTEKFDELM 114          
BLAST of GT623071 vs. TrEMBL
Match: C5Z5L8_SORBI (Putative uncharacterized protein Sb10g023460 OS=Sorghum bicolor GN=Sb10g023460 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.178e-47
Identity = 97/115 (84.35%), Postives = 107/115 (93.04%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME +TEGVNN+ I  ++ +KKNRIQVSNTKKPLFFYVNLAKRYMQQH EVELSALGMAIATVVTVAEILKNNGLA+EKKIMTSTVD+KDD+R RP+QKAKIEIVLGKT+ FDELM
Sbjct:    1 MEEVTEGVNNLAI--TEPHKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDVKDDTRARPIQKAKIEIVLGKTDKFDELM 113          
BLAST of GT623071 vs. TrEMBL
Match: Q69XJ9_ORYSJ (Os06g0602600 protein OS=Oryza sativa subsp. japonica GN=P0486H12.21 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.069e-47
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME +TE V+N++I  ++ +KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLA+EKKIMTSTVD+KDDSR RP+QKAKIEI+LGKTE FDELM
Sbjct:    1 MEEVTEAVSNLSI--TEPHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDVKDDSRSRPMQKAKIEILLGKTEKFDELM 113          
BLAST of GT623071 vs. TrEMBL
Match: A2YER6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23611 PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.069e-47
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME +TE V+N++I  ++ +KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLA+EKKIMTSTVD+KDDSR RP+QKAKIEI+LGKTE FDELM
Sbjct:    1 MEEVTEAVSNLSI--TEPHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDVKDDSRSRPMQKAKIEILLGKTEKFDELM 113          
BLAST of GT623071 vs. SwissProt
Match: Y2416_ARATH (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.747e-47
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME IT+GVNN+N+  +DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIATVVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIEI L K+E FDELM
Sbjct:    1 MEEITDGVNNMNLA-TDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELM 114          
BLAST of GT623071 vs. TAIR peptide
Match: AT1G29250.1 (| Symbols: | Alba DNA/RNA-binding protein | chr1:10223461-10224592 REVERSE LENGTH=130)

HSP 1 Score: 187.963 bits (476), Expect = 3.736e-48
Identity = 98/115 (85.22%), Postives = 105/115 (91.30%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME ITEGVNN+N+   D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTVAEILKNNG A+EKKIMTSTVDIKDDSRGRPVQKAKIEI L K+E FDELM
Sbjct:    1 MEEITEGVNNMNLA-VDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELM 114          
BLAST of GT623071 vs. TAIR peptide
Match: AT2G34160.1 (| Symbols: | Alba DNA/RNA-binding protein | chr2:14426283-14427220 FORWARD LENGTH=130)

HSP 1 Score: 187.578 bits (475), Expect = 4.879e-48
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 2
Query:   95 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            ME IT+GVNN+N+  +DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIATVVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIEI L K+E FDELM
Sbjct:    1 MEEITDGVNNMNLA-TDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELM 114          
BLAST of GT623071 vs. TAIR peptide
Match: AT3G04620.1 (| Symbols: | Alba DNA/RNA-binding protein | chr3:1255660-1256739 REVERSE LENGTH=164)

HSP 1 Score: 159.844 bits (403), Expect = 1.090e-39
Identity = 77/99 (77.78%), Postives = 93/99 (93.94%), Query Frame = 2
Query:  143 DSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM 439
            +++KKNRIQVSNTKKPLFFYVNLAKRY+QQHNEVELSALGMAI TVVT++EILKNNGLA EKK++TSTV +KD+++G+ VQKAKIEIVLGK++ FD L+
Sbjct:   33 ETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLV 131          
The following BLAST results are available for this feature:
BLAST of GT623071 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T433_SOYBN3.382e-5394.78Putative uncharacterized protein OS=Glycine max PE... [more]
C6SVJ8_SOYBN3.166e-5187.90Putative uncharacterized protein OS=Glycine max PE... [more]
C6T4F4_SOYBN3.500e-5093.04Putative uncharacterized protein OS=Glycine max PE... [more]
D7TBZ6_VITVI5.970e-5088.70Whole genome shotgun sequence of line PN40024, sca... [more]
B9SEQ3_RICCO1.018e-4990.43Putative uncharacterized protein OS=Ricinus commun... [more]
D7U0Z4_VITVI1.471e-4888.70Whole genome shotgun sequence of line PN40024, sca... [more]
B9RP66_RICCO9.531e-4886.09Putative uncharacterized protein OS=Ricinus commun... [more]
C5Z5L8_SORBI6.178e-4784.35Putative uncharacterized protein Sb10g023460 OS=So... [more]
Q69XJ9_ORYSJ8.069e-4784.35Os06g0602600 protein OS=Oryza sativa subsp. japoni... [more]
A2YER6_ORYSI8.069e-4784.35Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT623071 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Y2416_ARATH4.747e-4784.35Uncharacterized protein At2g34160 OS=Arabidopsis t... [more]
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BLAST of GT623071 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G29250.13.736e-4885.22| Symbols: | Alba DNA/RNA-binding protein | chr1:... [more]
AT2G34160.14.879e-4884.35| Symbols: | Alba DNA/RNA-binding protein | chr2:... [more]
AT3G04620.11.090e-3977.78| Symbols: | Alba DNA/RNA-binding protein | chr3:... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 39..102
score: 5.9
IPR014560Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-relatedPIRPIRSF030333Predicted DNA/RNA-binding protein related to Albacoord: 16..149
score: 8.6
NoneNo IPR availableGENE3D3.30.110.20no descriptioncoord: 37..145
score: 5.8
NoneNo IPR availableSEGsegsegcoord: 133..150
score
NoneNo IPR availableSUPERFAMILY82704AlbA-likecoord: 37..135
score: 2
NoneNo IPR availableSEGsegsegcoord: 1..22
score
NoneNo IPR availableSEGsegsegcoord: 2..16
score
NoneNo IPR availableSEGsegsegcoord: 13..24
score
NoneNo IPR availableSEGsegsegcoord: 20..33
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT623071 ID=GT623071; Name=GT623071; organism=Lens culinaris; type=EST; length=639bp
GCAGAACATAACAGAAGCATTCTTCGTTAAACATCTTTGTTAGGGTTTTG
AATCGAAACGTCACCGTATCTTCCGAACAGGGAAAGACAGATCAATGGAA
GTGATAACTGAAGGAGTAAACAACATCAACATTAATAACTCCGATTCTTA
CAAGAAGAATCGCATTCAAGTTTCTAACACCAAAAAACCCCTCTTCTTCT
ATGTTAATCTCGCCAAGAGATACATGCAACAGCATAACGAGGTGGAACTC
TCAGCACTAGGAATGGCTATTGCTACTGTAGTGACTGTTGCTGAGATTTT
GAAAAATAACGGACTTGCCATCGAAAAGAAAATTATGACATCAACAGTGG
ATATAAAGGATGATTCTAGAGGTAGACCTGTCCAAAAGGCCAAGATCGAA
ATAGTACTTGGAAAGACAGAAAATTTTGATGAGCTGATGGCAGCTGCAGC
CGCTGAAGCTGGTGAAAATGGAGATGCTGAAGAACAGAATGCTTAAATTT
CAAGGCAAAACTACAGATGAATCGGTTGAAGATAACTCTTTAATGATTTG
CATTTTTGTTGTTGCAATGTAGAAGACATTTCATATTATAAACTGACATG
CAATATTGAACCACAAAGTTCATTTGTTTCTTTTTGGTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR002775DNA/RNA-bd_Alba-like
IPR014560UCP030333_Alba