GT624001

EST Overview
NameGT624001
Unique NameGT624001
TypeEST
OrganismLens culinaris (lentil)
Sequence length806
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT624001 vs. TrEMBL
Match: D7TZU9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016786001 PE=4 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.128e-66
Identity = 132/207 (63.77%), Postives = 158/207 (76.33%), Query Frame = 3
Query:  189 MNLQQVGQPKS-SNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            MNLQQV QP+  +NG+GRR+   +  S+ DNK+  GKSN  RL + G  T +KGG YES SRDRLVYLTTC IG  VEVQVKNGSI SGIFHATN +KDFGI+LKMA LTKDG  +GQ + ++ VSKAPSK LIIP KELVQV AKDV+V+    ++E   D  Q+IM+DS+ISQ RH+++ REL RWVPDED+PQCPEL   FDGP
Sbjct:    1 MNLQQVAQPRPFANGFGRRR---EMGSRQDNKLQSGKSNPSRLPNAGVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKDFGIVLKMARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAKDVSVTRDGFSNELQQDKLQDIMLDSIISQSRHIEMERELERWVPDEDIPQCPELEKTFDGP 204          
BLAST of GT624001 vs. TrEMBL
Match: A5AZZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039722 PE=4 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.630e-65
Identity = 133/211 (63.03%), Postives = 159/211 (75.36%), Query Frame = 3
Query:  189 MNLQQVGQPKS-SNGYGRRKSEKDGASKSDNKIPPGKSNAGRLAS----TGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            MNLQQV QP+  +NG+GRR+   +  S+ DNK+  GKSN  RL +    TG  T +KGG YES SRDRLVYLTTC IG  VEVQVKNGSI SGIFHATN +KDFGI+LKMA LTKDG  +GQ + ++ VSKAPSK LIIP KELVQV AKDV+V+    ++E   D  Q+IM+DS+ISQ RH+++ REL RWVPDED+PQCPEL   FDGP
Sbjct:    1 MNLQQVAQPRPFANGFGRRR---EMGSRQDNKLQSGKSNPSRLPNAVIVTGVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKDFGIVLKMARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAKDVSVTRDGFSNELQQDKLQDIMLDSIISQSRHIEMERELERWVPDEDIPQCPELEKTFDGP 208          
BLAST of GT624001 vs. TrEMBL
Match: B9S5T2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0654100 PE=4 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 8.369e-62
Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 3
Query:  189 MNLQQVGQPKS-SNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            M+LQQ  QPKS +NG+GRR++E++G ++ DNK+  GKSN  R  S+ +    K G YESPSRDRLVYL+TCLIG  VEV +KNGSIYSG  H TN EK+F IILKMA LTKD   +GQ +  E +SKAPSKT IIPGKE+VQV AKDV+++   +  +  ++ HQEIM+DS+ISQ RHV+ GREL  WVPDED PQCPEL +IFDGP
Sbjct:    1 MSLQQPTQPKSYANGFGRRRAEREGGARLDNKLQSGKSNPNR--SSSSAIGGKVGVYESPSRDRLVYLSTCLIGHPVEVHLKNGSIYSGTCHTTNVEKEFAIILKMARLTKD-VFRGQKT--ESLSKAPSKTFIIPGKEVVQVIAKDVSITMDGMTHDLQHEKHQEIMIDSIISQSRHVEAGRELAPWVPDEDDPQCPELENIFDGP 202          
BLAST of GT624001 vs. TrEMBL
Match: A2PZE4_IPONI (Ataxin-2 related protein OS=Ipomoea nil GN=In25 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.364e-48
Identity = 107/205 (52.20%), Postives = 141/205 (68.78%), Query Frame = 3
Query:  189 MNLQQVGQPKSS-NGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFD 800
            MN+Q V Q +SS NG+GRR++ ++    +  K+   K+N+ RL S G     + G  E PSRDRLVY+T CLIG QVEVQ+ +GS++SGI HAT+T +DFGI+LKMA L KD SS G  S ++ +SK  SKT IIP KELVQ+ AKDV V++     +   +   ++M DS ISQ R V++GREL RWVPD D P+CPEL +IFD
Sbjct:    1 MNMQPVVQTRSSANGFGRRRTGRE----TGIKLQSAKTNSSRLTSVG-----QKGDSEIPSRDRLVYITACLIGHQVEVQMLDGSVFSGILHATDTVQDFGIVLKMARLIKD-SSHGPKSNSQSLSKPSSKTFIIPSKELVQITAKDVPVTSEGFKYDLQQEAQLDLMTDSCISQSRQVEVGRELERWVPDSDAPECPELDNIFD 195          
BLAST of GT624001 vs. TrEMBL
Match: B9GWC3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_756757 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.001e-47
Identity = 99/154 (64.29%), Postives = 120/154 (77.92%), Query Frame = 3
Query:  342 KGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDG 803
            K G YESPSR+RL+YLTTCLIG  VEVQ+KNGS+YSG  + TN EK+F IILKMA L KD S +GQ   AEFVSKAPSKTLI+PGKE+VQV AKDV+V+   +++E  +   QEIM+DS ISQPR V+  REL  W+P++D PQCPE  +IFDG
Sbjct:    3 KVGVYESPSRERLIYLTTCLIGHPVEVQLKNGSVYSGTCYTTNVEKEFAIILKMARLIKDISFRGQK--AEFVSKAPSKTLILPGKEVVQVIAKDVSVTVDGMSNEPQHAKQQEIMIDSYISQPRQVEAERELEPWIPEKDDPQCPESENIFDG 154          
BLAST of GT624001 vs. TrEMBL
Match: D7L2B3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_897659 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.873e-45
Identity = 102/207 (49.28%), Postives = 134/207 (64.73%), Query Frame = 3
Query:  189 MNLQQVGQPKSS-NGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            M++Q + Q KSS NG+  ++ E+D            K+N    A  G V     GS E PS DRLVYL+ C IG  VEV ++NGS+Y+GIFHA + EKDFGIILKMACL KDG+ +G  S +EFV K PSKT IIP  ELVQV AKD++VS+ ++++    +   E++ DS ISQ  HVD  R+L  WVPDE +PQ  +L ++FD P
Sbjct:    1 MSMQPIPQSKSSSNGFPLKRGERDEVLN--------KANTSNTAFNGEV-----GSLERPSLDRLVYLSACYIGHHVEVHLRNGSVYTGIFHAADVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSTNMSNAVQGEKPAELLTDSSISQSYHVDRERQLQPWVPDETIPQGADLENVFDNP 194          
BLAST of GT624001 vs. TrEMBL
Match: Q9LVJ8_ARATH (Genomic DNA, chromosome 3, P1 clone: MDC16 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.290e-43
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  ++ E +      N             ++  V + + GS +  S DRLVY TTC IG  VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G  S +EFV K PSKT IIP  ELVQV AKD++VS+ ++++    +   E++ DS ISQ  HVD  R+L RWVPDE +P   +L ++FD P
Sbjct:    9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191          
BLAST of GT624001 vs. TrEMBL
Match: Q94AM9_ARATH (Putative uncharacterized protein At3g14010 OS=Arabidopsis thaliana GN=At3g14010 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.290e-43
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  ++ E +      N             ++  V + + GS +  S DRLVY TTC IG  VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G  S +EFV K PSKT IIP  ELVQV AKD++VS+ ++++    +   E++ DS ISQ  HVD  R+L RWVPDE +P   +L ++FD P
Sbjct:    9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191          
BLAST of GT624001 vs. TrEMBL
Match: D7KLF4_ARALY (Ctc-interacting domain 3 OS=Arabidopsis lyrata subsp. lyrata GN=CID3 PE=4 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.532e-42
Identity = 100/196 (51.02%), Postives = 126/196 (64.29%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  R+ EK+           G +NA   A T      + GS ++PS   LVY TTC IG QVEV +KNGS+YSGIFHA + EKDFGIILKMACL +D  S+G  S +  VSK PSK LIIP  E+VQV AKD+ VS+ + +     +   E++ DS+ISQ  +VDL REL  WVPDEDVP C +L ++FD P
Sbjct:   10 SSNGFSHRRVEKEA----------GMNNAQPSAGT-TENGWEAGSVDTPSHKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAADVEKDFGIILKMACLMRD--SRGTKSRSPLVSKPPSKILIIPADEVVQVIAKDLPVSSHNGSDSVQCEKPLELLTDSLISQFYNVDLERELKPWVPDEDVPDCSDLENVFDDP 192          
BLAST of GT624001 vs. TrEMBL
Match: Q6K2L9_ORYSJ (Os02g0480900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0091C16.3-1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.006e-39
Identity = 94/197 (47.72%), Postives = 132/197 (67.01%), Query Frame = 3
Query:  198 QQVGQPKSS-NGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL 785
            QQ   P++S NG+  RK +++G+ + DNK    +S++G  +  GA    K G + SPSRDRL+Y+ T LIGQ V+V VKNGSI SGI HATN++KD G+I+KMA + KDGS++GQ S A+ V K   +T+IIPG+ELVQ+ AKDVA+   ++      +  +++M+DS IS+  H    REL RW PDE   +C EL
Sbjct:    5 QQTMPPRASANGFPHRKLDREGSGRHDNKTQLLRSSSGGFS--GAENGGKLG-HGSPSRDRLIYVLTQLIGQHVDVHVKNGSIISGILHATNSDKDLGVIMKMAQVIKDGSARGQKSAADVVKK--PETMIIPGRELVQILAKDVALGGDELPKGPSQEKRKDLMIDSAISR-SHYPEERELERWAPDEGDSECIEL 195          
BLAST of GT624001 vs. SwissProt
Match: ATX2_DICDI (Ataxin-2 homolog OS=Dictyostelium discoideum GN=atxn2 PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.556e-7
Identity = 40/139 (28.78%), Postives = 67/139 (48.20%), Query Frame = 3
Query:  369 RDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEK-----DFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQE-IMVDSVISQPRHVDLGRELHRWVPDEDV 767
            ++R V+++  L+GQ V V +KNG +Y GI H T+T        +G+ LKMA        + + +    ++  P   +II  K+ +Q+ A  V +   D   +S  +  Q+  + D+ +S        REL  W PD  V
Sbjct:   82 KERTVFMSMSLVGQNVSVTLKNGDVYEGILHTTSTSTGSSGGGWGVALKMA--------RKKDTNNRVITTLPLPLVIIEAKDFLQITATGVVL---DHYRDSFMNRDQQSFITDTELSGFDGNLKERELTPWTPDPSV 209          
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.4 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640324 FORWARD LENGTH=549)

HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  ++ E +      N             ++  V + + GS +  S DRLVY TTC IG  VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G  S +EFV K PSKT IIP  ELVQV AKD++VS+ ++++    +   E++ DS ISQ  HVD  R+L RWVPDE +P   +L ++FD P
Sbjct:    9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191          
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.3 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595)

HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  ++ E +      N             ++  V + + GS +  S DRLVY TTC IG  VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G  S +EFV K PSKT IIP  ELVQV AKD++VS+ ++++    +   E++ DS ISQ  HVD  R+L RWVPDE +P   +L ++FD P
Sbjct:    9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191          
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.2 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595)

HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  ++ E +      N             ++  V + + GS +  S DRLVY TTC IG  VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G  S +EFV K PSKT IIP  ELVQV AKD++VS+ ++++    +   E++ DS ISQ  HVD  R+L RWVPDE +P   +L ++FD P
Sbjct:    9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191          
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.1 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595)

HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  ++ E +      N             ++  V + + GS +  S DRLVY TTC IG  VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G  S +EFV K PSKT IIP  ELVQV AKD++VS+ ++++    +   E++ DS ISQ  HVD  R+L RWVPDE +P   +L ++FD P
Sbjct:    9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191          
BLAST of GT624001 vs. TAIR peptide
Match: AT1G54170.1 (| Symbols: CID3 | CTC-interacting domain 3 | chr1:20221353-20224919 REVERSE LENGTH=587)

HSP 1 Score: 163.696 bits (413), Expect = 1.089e-40
Identity = 97/196 (49.49%), Postives = 119/196 (60.71%), Query Frame = 3
Query:  219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806
            SSNG+  R+ EK+      N   P   N                S ++PS+  LVY TTC IG QVEV +KNGS+YSGIFHA N EKDFGIILKMACL +D  S+G  S    VSK  SK L IP  ELVQV AKD+ +S+  V+     +   E++ DS+ISQ  +VDL REL  WVPDEDVP C +L ++FD P
Sbjct:   10 SSNGFSHRRFEKEAWM---NNAQPSVDNTEN--------GWDAESVDTPSQKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAANVEKDFGIILKMACLIRD--SRGTKS--RTVSKPSSKLLKIPADELVQVIAKDLPLSSDSVSDSVQCEKPLELLTDSLISQFYNVDLERELKPWVPDEDVPDCSDLENVFDDP 190          
BLAST of GT624001 vs. TAIR peptide
Match: AT5G54920.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22302111-22305576 FORWARD LENGTH=522)

HSP 1 Score: 70.0922 bits (170), Expect = 1.638e-12
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  330 VTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASE 659
            ++ S   S  S   + L+  T C+IG QV V + +GS++SGIF+  + E +F I+LK A LTK G S+      + V     +TL+I    +VQ+ A+ V++S+ +VA E
Sbjct:   11 ISRSSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLENEFSIVLKNAKLTKKGRSKSNVESGKIV-----ETLVILSSNIVQIVAEGVSLSS-NVAGE 114          
BLAST of GT624001 vs. TAIR peptide
Match: AT5G54920.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22302111-22305576 FORWARD LENGTH=517)

HSP 1 Score: 70.0922 bits (170), Expect = 1.638e-12
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  330 VTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASE 659
            ++ S   S  S   + L+  T C+IG QV V + +GS++SGIF+  + E +F I+LK A LTK G S+      + V     +TL+I    +VQ+ A+ V++S+ +VA E
Sbjct:   11 ISRSSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLENEFSIVLKNAKLTKKGRSKSNVESGKIV-----ETLVILSSNIVQIVAEGVSLSS-NVAGE 114          
BLAST of GT624001 vs. TAIR peptide
Match: AT4G26990.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13551150-13554253 REVERSE LENGTH=474)

HSP 1 Score: 62.7734 bits (151), Expect = 2.616e-10
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 3
Query:  378 LVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAV 635
            L+  T C+IG QV V VK+GS++SGIF   + +  FGI+LK A +TK G+S    +    V      TL+I    +VQ+ A+ V++
Sbjct:   23 LIAATMCIIGLQVHVHVKDGSVFSGIFFTASVDNGFGIVLKDARITKKGTSISNVASGSVVD-----TLVILSSTIVQIIAEGVSL 103          
The following BLAST results are available for this feature:
BLAST of GT624001 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7TZU9_VITVI1.128e-6663.77Whole genome shotgun sequence of line PN40024, sca... [more]
A5AZZ5_VITVI1.630e-6563.03Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S5T2_RICCO8.369e-6261.35Putative uncharacterized protein OS=Ricinus commun... [more]
A2PZE4_IPONI2.364e-4852.20Ataxin-2 related protein OS=Ipomoea nil GN=In25 PE... [more]
B9GWC3_POPTR2.001e-4764.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7L2B3_ARALY1.873e-4549.28Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LVJ8_ARATH2.290e-4347.96Genomic DNA, chromosome 3, P1 clone: MDC16 OS=Arab... [more]
Q94AM9_ARATH2.290e-4347.96Putative uncharacterized protein At3g14010 OS=Arab... [more]
D7KLF4_ARALY2.532e-4251.02Ctc-interacting domain 3 OS=Arabidopsis lyrata sub... [more]
Q6K2L9_ORYSJ2.006e-3947.72Os02g0480900 protein OS=Oryza sativa subsp. japoni... [more]
back to top
BLAST of GT624001 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
ATX2_DICDI5.556e-728.78Ataxin-2 homolog OS=Dictyostelium discoideum GN=at... [more]
back to top
BLAST of GT624001 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 8
Match NameE-valueIdentityDescription
AT3G14010.41.468e-4547.96| Symbols: CID4 | CTC-interacting domain 4 | chr3:... [more]
AT3G14010.31.468e-4547.96| Symbols: CID4 | CTC-interacting domain 4 | chr3:... [more]
AT3G14010.21.468e-4547.96| Symbols: CID4 | CTC-interacting domain 4 | chr3:... [more]
AT3G14010.11.468e-4547.96| Symbols: CID4 | CTC-interacting domain 4 | chr3:... [more]
AT1G54170.11.089e-4049.49| Symbols: CID3 | CTC-interacting domain 3 | chr1:... [more]
AT5G54920.21.638e-1236.36| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT5G54920.11.638e-1236.36| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT4G26990.12.616e-1039.53| Symbols: | unknown protein; BEST Arabidopsis th... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12854ATAXIN 2-RELATEDcoord: 92..129
score: 5.8
NoneNo IPR availablePANTHERPTHR12854:SF7ATAXIN 2coord: 92..129
score: 5.8
NoneNo IPR availableSEGsegsegcoord: 12..23
score
NoneNo IPR availableSEGsegsegcoord: 14..29
score
NoneNo IPR availableSEGsegsegcoord: 1..17
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624001 ID=GT624001; Name=GT624001; organism=Lens culinaris; type=EST; length=806bp
CTCGTTTCACCCCTTTCTCTCTCCGTCGCTGCAATTGGTGCCTCCGTCGT
TTTCATCCTTCCAATCCCTAATTAACCCCCAAACTCACGCTTTTGCATTT
TCACCTCCTCCCTTCGACTTCAACGCTATTCTCTCTTCCGATCAAGAGTT
TCTTTCCTCAGGTTAGTGGAGCAAGGCTGTGGGTGAAGATGAATTTGCAA
CAAGTTGGGCAGCCTAAATCTTCTAATGGATATGGTCGTCGGAAATCTGA
AAAAGATGGGGCATCCAAATCGGATAATAAGATTCCCCCTGGAAAATCAA
ATGCTGGCAGATTAGCGAGTACAGGTGCAGTGACAAGTAGTAAAGGTGGT
AGTTATGAGAGTCCTTCACGTGATCGACTGGTATATTTAACAACATGCCT
TATTGGGCAACAGGTGGAAGTCCAGGTGAAAAATGGATCTATATACTCTG
GAATATTTCATGCTACAAATACTGAGAAAGATTTTGGAATCATTTTGAAA
ATGGCTTGCTTGACAAAGGATGGGTCTTCGCAAGGGCAGAGCTCCGGAGC
TGAATTTGTCAGCAAAGCTCCTTCTAAAACTTTAATTATACCTGGAAAAG
AACTTGTACAAGTTAAAGCAAAGGATGTTGCTGTTTCCACAGGTGACGTA
GCCAGTGAATCTCACTATGATGTGCATCAGGAGATCATGGTTGATTCGGT
AATATCTCAACCTCGTCATGTTGATTTAGGGAGAGAATTACACCGATGGG
TACCTGACGAAGATGTTCCACAATGCCCTGAGCTTTGACATATCTTTGAT
GGCCCT
back to top