GT624001
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624001 vs. TrEMBL
Match: D7TZU9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016786001 PE=4 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 1.128e-66 Identity = 132/207 (63.77%), Postives = 158/207 (76.33%), Query Frame = 3 Query: 189 MNLQQVGQPKS-SNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 MNLQQV QP+ +NG+GRR+ + S+ DNK+ GKSN RL + G T +KGG YES SRDRLVYLTTC IG VEVQVKNGSI SGIFHATN +KDFGI+LKMA LTKDG +GQ + ++ VSKAPSK LIIP KELVQV AKDV+V+ ++E D Q+IM+DS+ISQ RH+++ REL RWVPDED+PQCPEL FDGP Sbjct: 1 MNLQQVAQPRPFANGFGRRR---EMGSRQDNKLQSGKSNPSRLPNAGVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKDFGIVLKMARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAKDVSVTRDGFSNELQQDKLQDIMLDSIISQSRHIEMERELERWVPDEDIPQCPELEKTFDGP 204
BLAST of GT624001 vs. TrEMBL
Match: A5AZZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039722 PE=4 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.630e-65 Identity = 133/211 (63.03%), Postives = 159/211 (75.36%), Query Frame = 3 Query: 189 MNLQQVGQPKS-SNGYGRRKSEKDGASKSDNKIPPGKSNAGRLAS----TGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 MNLQQV QP+ +NG+GRR+ + S+ DNK+ GKSN RL + TG T +KGG YES SRDRLVYLTTC IG VEVQVKNGSI SGIFHATN +KDFGI+LKMA LTKDG +GQ + ++ VSKAPSK LIIP KELVQV AKDV+V+ ++E D Q+IM+DS+ISQ RH+++ REL RWVPDED+PQCPEL FDGP Sbjct: 1 MNLQQVAQPRPFANGFGRRR---EMGSRQDNKLQSGKSNPSRLPNAVIVTGVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKDFGIVLKMARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAKDVSVTRDGFSNELQQDKLQDIMLDSIISQSRHIEMERELERWVPDEDIPQCPELEKTFDGP 208
BLAST of GT624001 vs. TrEMBL
Match: B9S5T2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0654100 PE=4 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 8.369e-62 Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 3 Query: 189 MNLQQVGQPKS-SNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 M+LQQ QPKS +NG+GRR++E++G ++ DNK+ GKSN R S+ + K G YESPSRDRLVYL+TCLIG VEV +KNGSIYSG H TN EK+F IILKMA LTKD +GQ + E +SKAPSKT IIPGKE+VQV AKDV+++ + + ++ HQEIM+DS+ISQ RHV+ GREL WVPDED PQCPEL +IFDGP Sbjct: 1 MSLQQPTQPKSYANGFGRRRAEREGGARLDNKLQSGKSNPNR--SSSSAIGGKVGVYESPSRDRLVYLSTCLIGHPVEVHLKNGSIYSGTCHTTNVEKEFAIILKMARLTKD-VFRGQKT--ESLSKAPSKTFIIPGKEVVQVIAKDVSITMDGMTHDLQHEKHQEIMIDSIISQSRHVEAGRELAPWVPDEDDPQCPELENIFDGP 202
BLAST of GT624001 vs. TrEMBL
Match: A2PZE4_IPONI (Ataxin-2 related protein OS=Ipomoea nil GN=In25 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.364e-48 Identity = 107/205 (52.20%), Postives = 141/205 (68.78%), Query Frame = 3 Query: 189 MNLQQVGQPKSS-NGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFD 800 MN+Q V Q +SS NG+GRR++ ++ + K+ K+N+ RL S G + G E PSRDRLVY+T CLIG QVEVQ+ +GS++SGI HAT+T +DFGI+LKMA L KD SS G S ++ +SK SKT IIP KELVQ+ AKDV V++ + + ++M DS ISQ R V++GREL RWVPD D P+CPEL +IFD Sbjct: 1 MNMQPVVQTRSSANGFGRRRTGRE----TGIKLQSAKTNSSRLTSVG-----QKGDSEIPSRDRLVYITACLIGHQVEVQMLDGSVFSGILHATDTVQDFGIVLKMARLIKD-SSHGPKSNSQSLSKPSSKTFIIPSKELVQITAKDVPVTSEGFKYDLQQEAQLDLMTDSCISQSRQVEVGRELERWVPDSDAPECPELDNIFD 195
BLAST of GT624001 vs. TrEMBL
Match: B9GWC3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_756757 PE=4 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.001e-47 Identity = 99/154 (64.29%), Postives = 120/154 (77.92%), Query Frame = 3 Query: 342 KGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDG 803 K G YESPSR+RL+YLTTCLIG VEVQ+KNGS+YSG + TN EK+F IILKMA L KD S +GQ AEFVSKAPSKTLI+PGKE+VQV AKDV+V+ +++E + QEIM+DS ISQPR V+ REL W+P++D PQCPE +IFDG Sbjct: 3 KVGVYESPSRERLIYLTTCLIGHPVEVQLKNGSVYSGTCYTTNVEKEFAIILKMARLIKDISFRGQK--AEFVSKAPSKTLILPGKEVVQVIAKDVSVTVDGMSNEPQHAKQQEIMIDSYISQPRQVEAERELEPWIPEKDDPQCPESENIFDG 154
BLAST of GT624001 vs. TrEMBL
Match: D7L2B3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_897659 PE=4 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.873e-45 Identity = 102/207 (49.28%), Postives = 134/207 (64.73%), Query Frame = 3 Query: 189 MNLQQVGQPKSS-NGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 M++Q + Q KSS NG+ ++ E+D K+N A G V GS E PS DRLVYL+ C IG VEV ++NGS+Y+GIFHA + EKDFGIILKMACL KDG+ +G S +EFV K PSKT IIP ELVQV AKD++VS+ ++++ + E++ DS ISQ HVD R+L WVPDE +PQ +L ++FD P Sbjct: 1 MSMQPIPQSKSSSNGFPLKRGERDEVLN--------KANTSNTAFNGEV-----GSLERPSLDRLVYLSACYIGHHVEVHLRNGSVYTGIFHAADVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSTNMSNAVQGEKPAELLTDSSISQSYHVDRERQLQPWVPDETIPQGADLENVFDNP 194
BLAST of GT624001 vs. TrEMBL
Match: Q9LVJ8_ARATH (Genomic DNA, chromosome 3, P1 clone: MDC16 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.290e-43 Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ ++ E + N ++ V + + GS + S DRLVY TTC IG VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G S +EFV K PSKT IIP ELVQV AKD++VS+ ++++ + E++ DS ISQ HVD R+L RWVPDE +P +L ++FD P Sbjct: 9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191
BLAST of GT624001 vs. TrEMBL
Match: Q94AM9_ARATH (Putative uncharacterized protein At3g14010 OS=Arabidopsis thaliana GN=At3g14010 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.290e-43 Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ ++ E + N ++ V + + GS + S DRLVY TTC IG VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G S +EFV K PSKT IIP ELVQV AKD++VS+ ++++ + E++ DS ISQ HVD R+L RWVPDE +P +L ++FD P Sbjct: 9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191
BLAST of GT624001 vs. TrEMBL
Match: D7KLF4_ARALY (Ctc-interacting domain 3 OS=Arabidopsis lyrata subsp. lyrata GN=CID3 PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.532e-42 Identity = 100/196 (51.02%), Postives = 126/196 (64.29%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ R+ EK+ G +NA A T + GS ++PS LVY TTC IG QVEV +KNGS+YSGIFHA + EKDFGIILKMACL +D S+G S + VSK PSK LIIP E+VQV AKD+ VS+ + + + E++ DS+ISQ +VDL REL WVPDEDVP C +L ++FD P Sbjct: 10 SSNGFSHRRVEKEA----------GMNNAQPSAGT-TENGWEAGSVDTPSHKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAADVEKDFGIILKMACLMRD--SRGTKSRSPLVSKPPSKILIIPADEVVQVIAKDLPVSSHNGSDSVQCEKPLELLTDSLISQFYNVDLERELKPWVPDEDVPDCSDLENVFDDP 192
BLAST of GT624001 vs. TrEMBL
Match: Q6K2L9_ORYSJ (Os02g0480900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0091C16.3-1 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.006e-39 Identity = 94/197 (47.72%), Postives = 132/197 (67.01%), Query Frame = 3 Query: 198 QQVGQPKSS-NGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL 785 QQ P++S NG+ RK +++G+ + DNK +S++G + GA K G + SPSRDRL+Y+ T LIGQ V+V VKNGSI SGI HATN++KD G+I+KMA + KDGS++GQ S A+ V K +T+IIPG+ELVQ+ AKDVA+ ++ + +++M+DS IS+ H REL RW PDE +C EL Sbjct: 5 QQTMPPRASANGFPHRKLDREGSGRHDNKTQLLRSSSGGFS--GAENGGKLG-HGSPSRDRLIYVLTQLIGQHVDVHVKNGSIISGILHATNSDKDLGVIMKMAQVIKDGSARGQKSAADVVKK--PETMIIPGRELVQILAKDVALGGDELPKGPSQEKRKDLMIDSAISR-SHYPEERELERWAPDEGDSECIEL 195
BLAST of GT624001 vs. SwissProt
Match: ATX2_DICDI (Ataxin-2 homolog OS=Dictyostelium discoideum GN=atxn2 PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 5.556e-7 Identity = 40/139 (28.78%), Postives = 67/139 (48.20%), Query Frame = 3 Query: 369 RDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEK-----DFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQE-IMVDSVISQPRHVDLGRELHRWVPDEDV 767 ++R V+++ L+GQ V V +KNG +Y GI H T+T +G+ LKMA + + + ++ P +II K+ +Q+ A V + D +S + Q+ + D+ +S REL W PD V Sbjct: 82 KERTVFMSMSLVGQNVSVTLKNGDVYEGILHTTSTSTGSSGGGWGVALKMA--------RKKDTNNRVITTLPLPLVIIEAKDFLQITATGVVL---DHYRDSFMNRDQQSFITDTELSGFDGNLKERELTPWTPDPSV 209
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.4 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640324 FORWARD LENGTH=549) HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45 Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ ++ E + N ++ V + + GS + S DRLVY TTC IG VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G S +EFV K PSKT IIP ELVQV AKD++VS+ ++++ + E++ DS ISQ HVD R+L RWVPDE +P +L ++FD P Sbjct: 9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.3 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595) HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45 Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ ++ E + N ++ V + + GS + S DRLVY TTC IG VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G S +EFV K PSKT IIP ELVQV AKD++VS+ ++++ + E++ DS ISQ HVD R+L RWVPDE +P +L ++FD P Sbjct: 9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.2 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595) HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45 Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ ++ E + N ++ V + + GS + S DRLVY TTC IG VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G S +EFV K PSKT IIP ELVQV AKD++VS+ ++++ + E++ DS ISQ HVD R+L RWVPDE +P +L ++FD P Sbjct: 9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191
BLAST of GT624001 vs. TAIR peptide
Match: AT3G14010.1 (| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595) HSP 1 Score: 179.874 bits (455), Expect = 1.468e-45 Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ ++ E + N ++ V + + GS + S DRLVY TTC IG VEV ++NGS+Y+GIFHA N EKDFGIILKMACL KDG+ +G S +EFV K PSKT IIP ELVQV AKD++VS+ ++++ + E++ DS ISQ HVD R+L RWVPDE +P +L ++FD P Sbjct: 9 SSNGFPLKRGETEEVLHKTN-------------TSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQGEKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNP 191
BLAST of GT624001 vs. TAIR peptide
Match: AT1G54170.1 (| Symbols: CID3 | CTC-interacting domain 3 | chr1:20221353-20224919 REVERSE LENGTH=587) HSP 1 Score: 163.696 bits (413), Expect = 1.089e-40 Identity = 97/196 (49.49%), Postives = 119/196 (60.71%), Query Frame = 3 Query: 219 SSNGYGRRKSEKDGASKSDNKIPPGKSNAGRLASTGAVTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASESHYDVHQEIMVDSVISQPRHVDLGRELHRWVPDEDVPQCPEL*HIFDGP 806 SSNG+ R+ EK+ N P N S ++PS+ LVY TTC IG QVEV +KNGS+YSGIFHA N EKDFGIILKMACL +D S+G S VSK SK L IP ELVQV AKD+ +S+ V+ + E++ DS+ISQ +VDL REL WVPDEDVP C +L ++FD P Sbjct: 10 SSNGFSHRRFEKEAWM---NNAQPSVDNTEN--------GWDAESVDTPSQKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAANVEKDFGIILKMACLIRD--SRGTKS--RTVSKPSSKLLKIPADELVQVIAKDLPLSSDSVSDSVQCEKPLELLTDSLISQFYNVDLERELKPWVPDEDVPDCSDLENVFDDP 190
BLAST of GT624001 vs. TAIR peptide
Match: AT5G54920.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22302111-22305576 FORWARD LENGTH=522) HSP 1 Score: 70.0922 bits (170), Expect = 1.638e-12 Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 3 Query: 330 VTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASE 659 ++ S S S + L+ T C+IG QV V + +GS++SGIF+ + E +F I+LK A LTK G S+ + V +TL+I +VQ+ A+ V++S+ +VA E Sbjct: 11 ISRSSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLENEFSIVLKNAKLTKKGRSKSNVESGKIV-----ETLVILSSNIVQIVAEGVSLSS-NVAGE 114
BLAST of GT624001 vs. TAIR peptide
Match: AT5G54920.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22302111-22305576 FORWARD LENGTH=517) HSP 1 Score: 70.0922 bits (170), Expect = 1.638e-12 Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 3 Query: 330 VTSSKGGSYESPSRDRLVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAVSTGDVASE 659 ++ S S S + L+ T C+IG QV V + +GS++SGIF+ + E +F I+LK A LTK G S+ + V +TL+I +VQ+ A+ V++S+ +VA E Sbjct: 11 ISRSSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLENEFSIVLKNAKLTKKGRSKSNVESGKIV-----ETLVILSSNIVQIVAEGVSLSS-NVAGE 114
BLAST of GT624001 vs. TAIR peptide
Match: AT4G26990.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13551150-13554253 REVERSE LENGTH=474) HSP 1 Score: 62.7734 bits (151), Expect = 2.616e-10 Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 378 LVYLTTCLIGQQVEVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQSSGAEFVSKAPSKTLIIPGKELVQVKAKDVAV 635 L+ T C+IG QV V VK+GS++SGIF + + FGI+LK A +TK G+S + V TL+I +VQ+ A+ V++ Sbjct: 23 LIAATMCIIGLQVHVHVKDGSVFSGIFFTASVDNGFGIVLKDARITKKGTSISNVASGSVVD-----TLVILSSTIVQIIAEGVSL 103 The following BLAST results are available for this feature:
BLAST of GT624001 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624001 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT624001 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 8
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624001 ID=GT624001; Name=GT624001; organism=Lens culinaris; type=EST; length=806bpback to top |