GT624074
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624074 vs. TrEMBL
Match: B9GLT3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_178300 PE=4 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.111e-54 Identity = 102/158 (64.56%), Postives = 129/158 (81.65%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDYE 474 S YVLL+L S+++PMGE LSLWF + PI++SKEM FAR ++R ++MGNYM FF T++A+ASYLQYCI+E YIN+VR+L+LSYIN +GYKLHPYPL +LSK L ++ESDLE C++CGLETC D+ GNKLL TKQTTF PK GFQ Y F GL+ +E Sbjct: 200 SLYVLLHLDSNTQPMGESLSLWFRFVLHPIIRSKEMCFARSVLRFYQMGNYMRFFSTISAEASYLQYCILERYINKVRALSLSYINNAGYKLHPYPLVHLSKLLKMKESDLEVLCNACGLETCADDMGNKLLPTKQTTFCCPKEGFQSYIFTGLEQFE 357
BLAST of GT624074 vs. TrEMBL
Match: B9SHV9_RICCO (Leng8 protein, putative OS=Ricinus communis GN=RCOM_0622260 PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 5.162e-52 Identity = 99/159 (62.26%), Postives = 128/159 (80.50%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDYER 477 S YVLL+L S ++PMGE LSLWFS L PI++SKEM F+R ++R+FRMGNY FF TVAA+AS+LQYCI+E Y NE+R+ +LS IN +GYKLHPYPL +LS L+++ES+LE FC++CGL+T DE GNKLL TKQTTF PKGGFQ ++F L+ ++R Sbjct: 282 SLYVLLHLDSRNQPMGESLSLWFSRLPHPIIQSKEMCFSRSVLRAFRMGNYKRFFYTVAAEASHLQYCIIERYFNEIRAQSLSCINNAGYKLHPYPLAHLSNLLIMKESNLELFCNACGLKTYTDEMGNKLLPTKQTTFCIPKGGFQSFNFTDLEQFDR 440
BLAST of GT624074 vs. TrEMBL
Match: D7UD07_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_112.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012414001 PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.833e-50 Identity = 98/157 (62.42%), Postives = 122/157 (77.71%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDY 471 SF+VLL+LGS+++P+GE LSLW + + ILKSKEM FARR++R FRMGNY F T A +ASYLQY I+EPYINEVR+LALS +N+ GYKLHPYP+ +LSK LM++E D+ESFC++CGLET DE GNK L TKQT F PK F Y LGL+ + Sbjct: 125 SFHVLLHLGSNNQPLGESLSLWLGRVPSLILKSKEMCFARRLLRLFRMGNYKRFLCTTATEASYLQYYIIEPYINEVRALALSCVNYCGYKLHPYPIAHLSKLLMMKELDVESFCNACGLETSTDERGNKFLSTKQTNFHYPKEVFPSYCLLGLEHF 281
BLAST of GT624074 vs. TrEMBL
Match: D7UCZ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_112.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012401001 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.699e-50 Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDY 471 SF+VLL+LGS+S+P+GE LSLW + + ILKSKEM FARR++R FRMGNY F T +ASYLQY I+EPYINEVR+LALS +N+ GYKLHPYP+ +LSK LM++E D+ESFC++CGLET DE GNK L TKQT F PK F Y LGL+ + Sbjct: 268 SFHVLLHLGSNSQPLGESLSLWLGRVPSLILKSKEMCFARRLLRLFRMGNYKRFLCTTTTEASYLQYYIIEPYINEVRALALSCVNYCGYKLHPYPIAHLSKLLMMKELDVESFCNACGLETSTDERGNKFLSTKQTNFHYPKEVFPSYCLLGLEHF 424
BLAST of GT624074 vs. TrEMBL
Match: D7T5M8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_221.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004025001 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.836e-49 Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDY 471 SF+VLL+LGS+++P+GE LSLW + + ILKSKEM FARR++R FRMGNY F T A +ASYLQY I+EPYINEVR+LALS +N+ GYKLHPYP+ +LSK LM++E D+ESFC++CGLET E GNK L TKQT F PK F Y LGL+ + Sbjct: 265 SFHVLLHLGSNNQPLGESLSLWLGRVPSLILKSKEMCFARRLLRLFRMGNYKRFLCTTATEASYLQYYIIEPYINEVRALALSCVNYCGYKLHPYPIAHLSKLLMMKELDVESFCNACGLETSTGERGNKFLSTKQTNFHYPKEVFPSYCLLGLEHF 421
BLAST of GT624074 vs. TrEMBL
Match: D7T5M2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_221.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004016001 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.836e-49 Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDY 471 SF+VLL+LGS+++P+GE LSLW + + ILKSKEM FARR++R FRMGNY F T A +ASYLQY I+EPYINEVR+LALS +N+ GYKLHPYP+ +LSK LM++E D+ESFC++CGLET E GNK L TKQT F PK F Y LGL+ + Sbjct: 76 SFHVLLHLGSNNQPLGESLSLWLGRVPSLILKSKEMCFARRLLRLFRMGNYKRFLCTTATEASYLQYYIIEPYINEVRALALSCVNYCGYKLHPYPIAHLSKLLMMKELDVESFCNACGLETSTGERGNKFLSTKQTNFHYPKEVFPSYCLLGLEHF 232
BLAST of GT624074 vs. TrEMBL
Match: D7UD22_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_112.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012439001 PE=4 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 9.112e-49 Identity = 96/157 (61.15%), Postives = 120/157 (76.43%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDY 471 SF+VLL+LGS+++P+GE LSLW + + ILKSKEM FARR++R FRMGNY F T A +ASYLQY I+EPYINEVR+LALS +N+ GYKLHPYP+ +LSK LM++E D+ESFC++CGLET E GNK L TKQT F PK F Y L L+ + Sbjct: 268 SFHVLLHLGSNNQPLGESLSLWLGRVPSLILKSKEMCFARRLLRLFRMGNYKRFLCTTATEASYLQYYIIEPYINEVRALALSCVNYCGYKLHPYPIAHLSKLLMMKELDVESFCNACGLETSTGERGNKFLSTKQTNFHYPKEVFPSYCLLSLEHF 424
BLAST of GT624074 vs. TrEMBL
Match: D7T5L9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_221.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004011001 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.554e-48 Identity = 97/157 (61.78%), Postives = 120/157 (76.43%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDY 471 SF+VLL+LGS+S+P+GE LSLW + + ILKSKEM FARR++R FRMGNY F T A +ASYLQY I+EPYINEVR+LALS +N+ GYKLH YP+ +LSK LM++E D+ESFC +CGLET +E GNK L TKQT F PK F Y LGL+ + Sbjct: 261 SFHVLLHLGSNSQPLGESLSLWLGRVPSLILKSKEMCFARRLLRLFRMGNYKRFLCTTATEASYLQYYIIEPYINEVRALALSCVNYCGYKLHLYPIAHLSKLLMMKELDVESFCTACGLETSTNERGNKFLSTKQTNFHYPKEVFPSYCLLGLEHF 417
BLAST of GT624074 vs. TrEMBL
Match: D7UD16_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_112.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012432001 PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 6.530e-47 Identity = 93/149 (62.42%), Postives = 115/149 (77.18%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKY 447 SF+VLL+LG +++P+GE LSLW + + ILKSKEM FARR++R FRMGNY F T A +ASYLQY I+EPYINEVR+LALS +N+ GYKLHPYP+ +LSK LM++E D+ESFC++CGLET E GNK L TKQT F PK F Y Sbjct: 251 SFHVLLHLGFNNQPLGESLSLWLGRVPSLILKSKEMCFARRLLRLFRMGNYKHFLCTTATEASYLQYYIIEPYINEVRALALSCVNYCGYKLHPYPIAHLSKLLMMKELDVESFCNACGLETSTGERGNKFLSTKQTNFHYPKEVFPSY 399
BLAST of GT624074 vs. TrEMBL
Match: D7LUT3_ARALY (SAC3/GANP family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485838 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 5.174e-44 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQDYER 477 SFYVLL+L S S MGEPLSLWF L+ ++KSKE+ F R ++R +RMGNY +F A++A+YLQYCI EPYI E+RS+A+ YIN YKL PYPL LS++L+++E D+ES CH CGLETC D G +L KQ+TF P+ F+ Y +G++ E+ Sbjct: 247 SFYVLLHLNSSSGVMGEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMGNYKNFLSRTASEATYLQYCISEPYIREMRSVAVQYINNVCYKLQPYPLLRLSQNLLMKELDVESLCHECGLETCTDPDGFTVLPAKQSTFRNPEDKFKVYDLIGIERIEK 405
BLAST of GT624074 vs. TAIR peptide
Match: AT3G54380.3 (| Symbols: | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | chr3:20133985-20136378 REVERSE LENGTH=334) HSP 1 Score: 167.548 bits (423), Expect = 6.624e-42 Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQ 465 S YVLL+L S MGEPLSLWF L+ ++KSKE+ F R ++R +RMGNY +F A++A+YLQYCI E +I E+R +A+ YIN YKL PYPL LS++L ++E D+ES CH CGLETC D G +L KQ+TF P+ F+ Y +G++ Sbjct: 174 SLYVLLHLNPSSGVMGEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMGNYKNFLSRTASEATYLQYCISEHHIREMRLVAVQYINNVCYKLQPYPLLRLSQNLKMKELDVESLCHECGLETCTDPDGFTVLPVKQSTFRSPEDKFKVYDLIGIE 328
BLAST of GT624074 vs. TAIR peptide
Match: AT3G54380.1 (| Symbols: | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | chr3:20133985-20136752 REVERSE LENGTH=406) HSP 1 Score: 167.548 bits (423), Expect = 6.624e-42 Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIEESDLESFCHSCGLETCIDESGNKLLQTKQTTFSPPKGGFQKYSFLGLQ 465 S YVLL+L S MGEPLSLWF L+ ++KSKE+ F R ++R +RMGNY +F A++A+YLQYCI E +I E+R +A+ YIN YKL PYPL LS++L ++E D+ES CH CGLETC D G +L KQ+TF P+ F+ Y +G++ Sbjct: 246 SLYVLLHLNPSSGVMGEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMGNYKNFLSRTASEATYLQYCISEHHIREMRLVAVQYINNVCYKLQPYPLLRLSQNLKMKELDVESLCHECGLETCTDPDGFTVLPVKQSTFRSPEDKFKVYDLIGIE 400
BLAST of GT624074 vs. TAIR peptide
Match: AT3G54380.2 (| Symbols: | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | chr3:20134068-20136752 REVERSE LENGTH=383) HSP 1 Score: 116.316 bits (290), Expect = 1.751e-26 Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 1 SFYVLLYLGSHSKPMGEPLSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHPYPLFNLSKHLMIE 321 S YVLL+L S MGEPLSLWF L+ ++KSKE+ F R ++R +RMGNY +F A++A+YLQYCI E +I E+R +A+ YIN YKL PYPL LS++L ++ Sbjct: 246 SLYVLLHLNPSSGVMGEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMGNYKNFLSRTASEATYLQYCISEHHIREMRLVAVQYINNVCYKLQPYPLLRLSQNLKMK 352
BLAST of GT624074 vs. TAIR peptide
Match: AT3G06290.1 (| Symbols: | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | chr3:1899123-1907297 REVERSE LENGTH=1697) HSP 1 Score: 69.3218 bits (168), Expect = 2.455e-12 Identity = 44/128 (34.38%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 4 FYVLLYLGSHSKPMGEP--LSLWFSHLSTPILKSKEMLFARRIVRSFRMGNYMDFFRTVAADASYLQYCIMEPYINEVRSLALSYINFSGYKLHP-YPLFNLSKHLMIEESDLESFCHSCGLETCIDE 378 +Y LL L H EP LSL ++++ I ++ E+LFAR + R+ R GN++ FFR +A ASYLQ C+M + +++R+ AL+ ++ SG +++ P+ ++S + +EE D+E+ G + E Sbjct: 659 YYALLKLDKHPGYKVEPSELSLDLANMTPEIRQTSEVLFARNVARACRTGNFIAFFR-LARKASYLQACLMHAHFSKLRTQALASLH-SGLQINQGLPVSDMSNWIGMEEEDIEALLEYHGFSIKVFE 784 The following BLAST results are available for this feature:
BLAST of GT624074 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624074 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624074 ID=GT624074; Name=GT624074; organism=Lens culinaris; type=EST; length=739bpback to top |