GT624229

EST Overview
NameGT624229
Unique NameGT624229
TypeEST
OrganismLens culinaris (lentil)
Sequence length352
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT624229 vs. TrEMBL
Match: B9T3A9_RICCO (Ptm1, putative OS=Ricinus communis GN=RCOM_0392150 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.191e-32
Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 3
Query:   54 SVHDYKSEAFSLKGNAFVVHGGSEGIYSST----LNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            SVH+YK + F  KGNAFVVHGG+EGIYSST     NE++  P+  DS+IRF+K+ FRR ++ +NF+SG +Q +VFEVEDRE IGGSAYGGQRA+CCT DLAKL
Sbjct:   22 SVHEYKGDRFVAKGNAFVVHGGNEGIYSSTNSGDFNESNAIPASGDSYIRFEKIKFRRTEDFANFTSGLVQVIVFEVEDRETIGGSAYGGQRAICCTADLAKL 124          
BLAST of GT624229 vs. TrEMBL
Match: D7TZQ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016725001 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.164e-31
Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSS-TLNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVH+Y    F  KGNAFVVHGGSEGIYSS   + T+   +  D+FIRF+K+ FRR KE SNFSSG IQAVVFEV+DRE IGGSAYGGQRA+CCT DLAKL
Sbjct:   23 ASVHEYAGVRFVGKGNAFVVHGGSEGIYSSHPTHNTTAAVANGDAFIRFEKIKFRRPKEFSNFSSGLIQAVVFEVDDRETIGGSAYGGQRAICCTADLAKL 123          
BLAST of GT624229 vs. TrEMBL
Match: A5CA53_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033728 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.164e-31
Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSS-TLNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVH+Y    F  KGNAFVVHGGSEGIYSS   + T+   +  D+FIRF+K+ FRR KE SNFSSG IQAVVFEV+DRE IGGSAYGGQRA+CCT DLAKL
Sbjct:   23 ASVHEYAGVRFVGKGNAFVVHGGSEGIYSSHPTHNTTAAVANGDAFIRFEKIKFRRPKEFSNFSSGLIQAVVFEVDDRETIGGSAYGGQRAICCTADLAKL 123          
BLAST of GT624229 vs. TrEMBL
Match: D7KZD9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895100 PE=4 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.570e-30
Identity = 68/100 (68.00%), Postives = 80/100 (80.00%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVH+Y++E F  KGNAFV HGGSEGIYSS+ ++         SFIRF+K+ F+R +E+SN SS P+QAVVFEVEDRE IGGSAYGGQRAVCCT DLAKL
Sbjct:   19 ASVHEYRNERFISKGNAFVFHGGSEGIYSSSPSDNFTSEFDAASFIRFEKIKFQRPEEVSNRSSLPVQAVVFEVEDRENIGGSAYGGQRAVCCTSDLAKL 118          
BLAST of GT624229 vs. TrEMBL
Match: Q9C9E6_ARATH (Putative uncharacterized protein T10D10.5 OS=Arabidopsis thaliana GN=At1g72480 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.569e-30
Identity = 69/100 (69.00%), Postives = 79/100 (79.00%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVH+Y+SE F  KGNAFV HGGSEGIYSS+ ++     S   SFIRF+K+ F+R +E+SN SS  I AVVFEVEDRE IGGSAYGGQRAVCCT DLAKL
Sbjct:   19 ASVHEYRSERFVSKGNAFVFHGGSEGIYSSSPSDNFTSDSDSVSFIRFEKIKFQRPEEVSNRSSLSIHAVVFEVEDRENIGGSAYGGQRAVCCTSDLAKL 118          
BLAST of GT624229 vs. TrEMBL
Match: Q56YA4_ARATH (Putative uncharacterized protein At1g72480 OS=Arabidopsis thaliana GN=At1g72480 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.569e-30
Identity = 69/100 (69.00%), Postives = 79/100 (79.00%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVH+Y+SE F  KGNAFV HGGSEGIYSS+ ++     S   SFIRF+K+ F+R +E+SN SS  I AVVFEVEDRE IGGSAYGGQRAVCCT DLAKL
Sbjct:   19 ASVHEYRSERFVSKGNAFVFHGGSEGIYSSSPSDNFTSDSDSVSFIRFEKIKFQRPEEVSNRSSLSIHAVVFEVEDRENIGGSAYGGQRAVCCTSDLAKL 118          
BLAST of GT624229 vs. TrEMBL
Match: B9N7F1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_273474 PE=4 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.868e-29
Identity = 67/99 (67.68%), Postives = 73/99 (73.74%), Query Frame = 3
Query:   54 SVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            SVH+YK E F  KGNAFVVHGGSEGIYS   NE SI              TFRR +E SNFSSG +QA+VFEVEDRE++GGSAYGGQRAVCCT DLAKL
Sbjct:   20 SVHEYKGERFVGKGNAFVVHGGSEGIYSGNHNENSI--------------TFRRTREFSNFSSGLVQAIVFEVEDRELVGGSAYGGQRAVCCTADLAKL 104          
BLAST of GT624229 vs. TrEMBL
Match: B9GVZ0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1073369 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.625e-27
Identity = 68/102 (66.67%), Postives = 74/102 (72.55%), Query Frame = 3
Query:   54 SVHDYKSEAFSLKGNAFVVHGGSEGIYSST---LNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            SVH+YK E F  KGNAFVVHGGSEGIYSS    +NE SI              TF+R +E SNFSSG +QA+VFEVEDRE IGGSAYGGQRAVCCT DLAKL
Sbjct:   23 SVHEYKGERFVGKGNAFVVHGGSEGIYSSASENVNEKSI--------------TFQRTQEFSNFSSGLVQAIVFEVEDRESIGGSAYGGQRAVCCTADLAKL 110          
BLAST of GT624229 vs. TrEMBL
Match: C5XDP5_SORBI (Putative uncharacterized protein Sb02g025760 OS=Sorghum bicolor GN=Sb02g025760 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.053e-26
Identity = 59/109 (54.13%), Postives = 81/109 (74.31%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSS-----TLNETSIPPSIPDSFIRFDKVTFRRNKELSNF----SSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVH+Y+  +F+ KGNAF++H GSEG+Y++     T  +     ++ D+FIRFDK+TFRR ++ +N     SS  +Q +VFE+EDREMIGGSAYGGQ+A+CCT DLAKL
Sbjct:   20 ASVHEYRGLSFANKGNAFILHAGSEGLYAASHANTTAEDDEDAAAVADAFIRFDKITFRRPEDTNNSVKETSSAKVQVLVFEIEDREMIGGSAYGGQKAICCTSDLAKL 128          
BLAST of GT624229 vs. TrEMBL
Match: B4F8U5_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.003e-26
Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSS-----TLNETSIPPSIPDSFIRFDKVTFRR----NKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVHDY+  +F+ KGNAF++H GSEG+Y++     T  +     ++ D+FIRFDKVTFRR    N  +   SS  +  +VFEVEDREMIGGSAYGGQ+A+CC+ DLAKL
Sbjct:   20 ASVHDYRGLSFANKGNAFILHAGSEGLYAASHANTTAEDDEDTAAVADAFIRFDKVTFRRPEDTNDSVKETSSAKVHILVFEVEDREMIGGSAYGGQKAICCSSDLAKL 128          
BLAST of GT624229 vs. TAIR peptide
Match: AT1G72480.1 (| Symbols: | Lung seven transmembrane receptor family protein | chr1:27286304-27288339 REVERSE LENGTH=509)

HSP 1 Score: 134.035 bits (336), Expect = 1.771e-32
Identity = 69/100 (69.00%), Postives = 79/100 (79.00%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPDSFIRFDKVTFRRNKELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            ASVH+Y+SE F  KGNAFV HGGSEGIYSS+ ++     S   SFIRF+K+ F+R +E+SN SS  I AVVFEVEDRE IGGSAYGGQRAVCCT DLAKL
Sbjct:   19 ASVHEYRSERFVSKGNAFVFHGGSEGIYSSSPSDNFTSDSDSVSFIRFEKIKFQRPEEVSNRSSLSIHAVVFEVEDRENIGGSAYGGQRAVCCTSDLAKL 118          
BLAST of GT624229 vs. TAIR peptide
Match: AT2G01070.2 (| Symbols: | Lung seven transmembrane receptor family protein | chr2:75596-77300 FORWARD LENGTH=452)

HSP 1 Score: 88.1965 bits (217), Expect = 1.114e-18
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPDSFIRFDKVTFRRN-KELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            AS H Y S+ F   GN+ +++GGSEGI++S+            S IRF+ +T  R      + S+G +QAV+FE  DR  IGGSAYGGQR++CCT DLAKL
Sbjct:   27 ASAHIYSSQPFHDVGNSLLLYGGSEGIFASSR-----------SLIRFENITLWRTITGKGHRSNGLVQAVIFEASDRNNIGGSAYGGQRSICCTPDLAKL 116          
BLAST of GT624229 vs. TAIR peptide
Match: AT2G01070.1 (| Symbols: | Lung seven transmembrane receptor family protein | chr2:75596-77625 FORWARD LENGTH=496)

HSP 1 Score: 88.1965 bits (217), Expect = 1.114e-18
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 3
Query:   51 ASVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPDSFIRFDKVTFRRN-KELSNFSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKL 350
            AS H Y S+ F   GN+ +++GGSEGI++S+            S IRF+ +T  R      + S+G +QAV+FE  DR  IGGSAYGGQR++CCT DLAKL
Sbjct:   27 ASAHIYSSQPFHDVGNSLLLYGGSEGIFASSR-----------SLIRFENITLWRTITGKGHRSNGLVQAVIFEASDRNNIGGSAYGGQRSICCTPDLAKL 116          
BLAST of GT624229 vs. TAIR peptide
Match: AT1G61670.1 (| Symbols: | Lung seven transmembrane receptor family protein | chr1:22770132-22772258 FORWARD LENGTH=513)

HSP 1 Score: 78.1814 bits (191), Expect = 1.153e-15
Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = 3
Query:   54 SVHDYKSEAFSLKGNAFVVHGGSEGIYSSTLNETSIPPSIPD-----SFIRFDKVTFRRNKELSN------FSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLA 344
            S+H+Y +E F+ K NA   HGGSEG+Y+S   + +   S  +     SFIRFD VTF R KE ++       +SG ++A++ EV+DR+ IGG+ +     +CCT +LA
Sbjct:   26 SIHEYNNEKFTAKFNARFFHGGSEGLYASKSQDLNSSSSSDNSFKGKSFIRFDDVTFVRTKESASKQNAMQSTSGLVEAIILEVKDRDRIGGT-FLKSEVICCTPELA 132          
BLAST of GT624229 vs. TAIR peptide
Match: AT1G10980.1 (| Symbols: | Lung seven transmembrane receptor family protein | chr1:3667531-3669821 REVERSE LENGTH=516)

HSP 1 Score: 64.6994 bits (156), Expect = 1.320e-11
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 3
Query:   54 SVHDYK-SEAFSLKGNAFVVHGGSEGIYSSTLNE-----TSIPPSIPDSFIRFDKVTFRRNKELSN------FSSGPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLA 344
            S+HDY  S  F+   NA    GGSEGIY S   +     +  P    +SFIRFD +TF R KE ++       ++G ++A++FEV+ R+ +GGS +  +  +CCT  LA
Sbjct:   26 SIHDYNNSGGFTKIANARYFVGGSEGIYGSEFLDVHHASSDTPLLKGNSFIRFDDITFVRTKESASKQNSTLAAAGLVEAILFEVKQRDRVGGSFFKSE-DMCCTPKLA 133          
The following BLAST results are available for this feature:
BLAST of GT624229 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9T3A9_RICCO2.191e-3265.05Ptm1, putative OS=Ricinus communis GN=RCOM_0392150... [more]
D7TZQ0_VITVI3.164e-3170.30Whole genome shotgun sequence of line PN40024, sca... [more]
A5CA53_VITVI3.164e-3170.30Putative uncharacterized protein OS=Vitis vinifera... [more]
D7KZD9_ARALY1.570e-3068.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9C9E6_ARATH4.569e-3069.00Putative uncharacterized protein T10D10.5 OS=Arabi... [more]
Q56YA4_ARATH4.569e-3069.00Putative uncharacterized protein At1g72480 OS=Arab... [more]
B9N7F1_POPTR3.868e-2967.68Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9GVZ0_POPTR1.625e-2766.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5XDP5_SORBI1.053e-2654.13Putative uncharacterized protein Sb02g025760 OS=So... [more]
B4F8U5_MAIZE4.003e-2655.05Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GT624229 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G72480.11.771e-3269.00| Symbols: | Lung seven transmembrane receptor fa... [more]
AT2G01070.21.114e-1847.52| Symbols: | Lung seven transmembrane receptor fa... [more]
AT2G01070.11.114e-1847.52| Symbols: | Lung seven transmembrane receptor fa... [more]
AT1G61670.11.153e-1540.74| Symbols: | Lung seven transmembrane receptor fa... [more]
AT1G10980.11.320e-1138.53| Symbols: | Lung seven transmembrane receptor fa... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..19
score
NoneNo IPR availableSEGsegsegcoord: 2..14
score
NoneNo IPR availableSEGsegsegcoord: 1..16
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624229 ID=GT624229; Name=GT624229; organism=Lens culinaris; type=EST; length=352bp
TAACTACTCTCCTTACCATTCTCCTCCTCATCACATCTCTCCAAACACAA
GCTTCCGTCCACGACTACAAAAGCGAAGCTTTCTCCCTCAAAGGCAACGC
CTTTGTCGTCCATGGGGGCAGCGAAGGAATTTACTCATCTACCCTCAATG
AAACTTCCATCCCACCTTCAATTCCCGACTCTTTCATTAGGTTTGATAAA
GTCACATTCCGCAGAAACAAGGAATTATCAAACTTTAGCTCGGGGCCGAT
TCAAGCAGTTGTTTTCGAAGTTGAAGACAGAGAGATGATTGGTGGTTCAG
CTTATGGAGGTCAAAGAGCCGTCTGTTGCACGGGTGATCTGGCTAAACTT
GG
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