GT624395
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624395 vs. TrEMBL
Match: C6TFZ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.788e-28 Identity = 67/102 (65.69%), Postives = 77/102 (75.49%), Query Frame = 2 Query: 2 NSSNQSYRVRDSSSQTSSAGCGGKLDGVAMWFVNGVTMAFFASLNRCSCIRIATKEDVEDANDLPLMFDDGNLRHDG-VXXXXXXXXXXXGKGEKSGAVLVD 304 +SS+ S R SS+Q SS+ CG K DGVAMWF+NGVT AFFASLNRCSCIRIAT+ED +DANDLPLM +DGNLRHDG V GKG+K+ AVLVD Sbjct: 7 SSSSSSDESRVSSTQASSSACG-KFDGVAMWFINGVTTAFFASLNRCSCIRIATEEDGDDANDLPLMLNDGNLRHDGVVAVVGTASRRRTGKGKKNEAVLVD 107
BLAST of GT624395 vs. TrEMBL
Match: A9PCJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823861 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.514e-20 Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 5 SSNQSYRVRDSSSQTSSAGCGGKLDGVAMWFVNGVTMAFFASLNRCSCIRIATKEDVEDANDLPLMFDDGNLRH 226 S++ RVR +SS SS GCG KLDGVAMWF+NGV AFFASL RCSCIRIAT++D ++AND PL+ +DGN+RH Sbjct: 17 SNSVEPRVRTTSSHGSSPGCG-KLDGVAMWFINGVASAFFASLERCSCIRIATEDDGDEANDAPLILNDGNMRH 89
BLAST of GT624395 vs. TrEMBL
Match: A9PE30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816443 PE=4 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.673e-19 Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 5 SSNQSYRVRDSSSQTSSAGCGGKLDGVAMWFVNGVTMAFFASLNRCSCIRIATKEDVEDANDLPLMFDDGNLRH 226 S++ RVR S+S SS GCG KLDGVAMWF+NGV AFFAS+ RCSCIRIAT++D ++AND PL+ DGN RH Sbjct: 18 SNSVEPRVRTSTSHGSSPGCG-KLDGVAMWFINGVAGAFFASMERCSCIRIATEDDGDEANDAPLILHDGNTRH 90
BLAST of GT624395 vs. TrEMBL
Match: B9IBM2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774122 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.018e-8 Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 2 Query: 23 RVRDSSSQTSSAGCGGKLDGVAMWFVNGVTMAFFASLNRCSCIRIATKEDVEDANDLPLMFDDG 214 +V+ + S A LDGVA W +NGV FF SL RCSCI I TK+D ED++ LPL+ +G Sbjct: 26 KVQPPAIPNSRAPACRMLDGVAAWLINGVATIFFTSLERCSCIYIDTKDDSEDSSHLPLIHYEG 89
BLAST of GT624395 vs. TrEMBL
Match: B9R6W7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1586620 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.329e-8 Identity = 32/49 (65.31%), Postives = 35/49 (71.43%), Query Frame = -2 Query: 67 PSSNINGKSLASSTSSLVAMRMQEQRFKEAKKAIVTPLTNHIATPSSFP 213 PS I G SLASS SS VA+RMQE +AK A+ TP NHIATPSSFP Sbjct: 3 PSLRIRGASLASSQSSSVAIRMQEHLSNDAKNALATPFMNHIATPSSFP 51
BLAST of GT624395 vs. TrEMBL
Match: C5WPP6_SORBI (Putative uncharacterized protein Sb01g012130 OS=Sorghum bicolor GN=Sb01g012130 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.961e-8 Identity = 38/93 (40.86%), Postives = 47/93 (50.54%), Query Frame = 2 Query: 29 RDSSSQTSSAGCGGK-LDGVAMWFVNGVTMAFFASLNRCSCIRIATKEDVED----ANDLPLMFDDGNLRHDGVXXXXXXXXXXXGKGEKSGA 292 R SS GCG LD VA W G+ FFASL RCSC + T +D+ D ++ PLMFDDGN GV GKG ++G+ Sbjct: 31 RTPSSAGQGHGCGWPPLDRVAGWVGGGIAAVFFASLERCSCFNVRTYDDLLDDEQRDSEAPLMFDDGNGNSTGV---ERRGARRCGKGRRTGS 120 The following BLAST results are available for this feature:
BLAST of GT624395 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624395 ID=GT624395; Name=GT624395; organism=Lens culinaris; type=EST; length=421bpback to top |