GT624566
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624566 vs. TrEMBL
Match: C6TJ40_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.504e-31 Identity = 67/94 (71.28%), Postives = 75/94 (79.79%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAVIRRCKRKLH 283 FRYDY DWK+MKD+VPDGKELMP R Q TV SQ + DN AL VTPIRK+SRNRGRV+QEE VVEESPEC++E+ASR IRRCKRKLH Sbjct: 263 FRYDYQDWKLMKDVVPDGKELMPRRTQCCTVVASQEGMSDDNFQPALAVTPIRKLSRNRGRVVQEEGVVEESPECNEENASRAGAIRRCKRKLH 356
BLAST of GT624566 vs. TrEMBL
Match: B9GYV4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_758363 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.854e-19 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEES-VVEESPECDDEDASREAVIRRCKRKL 280 FR+D+ DWK+MK +VPDG+ELMPHR + SQ E D +N TPIRK SRNRG V+QE+S VVE+SP+ DD+ +R + RC+RKL Sbjct: 302 FRFDFRDWKLMKGVVPDGEELMPHR---ESSGASQVEPDANNTEGTRSRTPIRKFSRNRGLVVQEDSVVVEDSPDIDDDVDARATGLMRCRRKL 392
BLAST of GT624566 vs. TrEMBL
Match: D7TIF2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033510001 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.264e-16 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAE-VDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAVIRRCKRK 277 FR+D+ DWK+M V G+ELMP R + + SQ + V + A A P TPIRK+SRNRG VLQE++VVE+SPE DD +R AVIR+ K K Sbjct: 357 FRFDFKDWKLMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDA-GTRAAVIRKGKGK 448
BLAST of GT624566 vs. TrEMBL
Match: D7KHN1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474228 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.520e-15 Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDD-EDASREAVIRRCKRKL 280 FR D+ DWK+M ++VP G+ELMPHR + V S + Q TPIRK+SRNRG V+QEE+VVEE +D D + + RRCKRKL Sbjct: 314 FRLDFKDWKLMSEMVPLGQELMPHR--ETAVASSSCPAASADFTQDTQTTPIRKLSRNRGLVVQEETVVEEETVVEDTPDTNGDETRRRCKRKL 405
BLAST of GT624566 vs. TrEMBL
Match: Q9C689_ARATH (Putative uncharacterized protein At1g51130 OS=Arabidopsis thaliana GN=At1g51130 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.282e-14 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHR---IQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAVIRRCKRKL 280 FR D+ DWK+M ++VP G+ELMPHR + S+ + A D Q TPIRK+SRNRG V+QEE+VVE++P D + RRCKR+L Sbjct: 311 FRLDFKDWKLMSEMVPLGEELMPHRQTAVASSSCPAASAPASADF-TQDTQTTPIRKLSRNRGLVVQEETVVEDTP-----DKEGDGTRRRCKRRL 400
BLAST of GT624566 vs. TrEMBL
Match: B9SVD8_RICCO (Non-structural maintenance of chromosome element, putative OS=Ricinus communis GN=RCOM_0565760 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.303e-13 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAVIRRCKRKL 280 FR+D+ DWK+M D+VP G ELMP R + + + N + TPIRK+ RNRG V+QE+SVVE+SPE +A++ RC+RK+ Sbjct: 305 FRFDFKDWKVMMDMVPQGDELMPDRKNSVSETEPETNISQGNTNR----TPIRKLCRNRGLVVQEDSVVEDSPEI---EAAKGIGSLRCRRKI 390
BLAST of GT624566 vs. TrEMBL
Match: B4FSE7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.758e-12 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAVIR 262 FR+D+ DWK+MK++V +G+EL+PHR S + E D N +TPIRK++RNRG VLQ+ VVEE+PE +++ + R + R Sbjct: 267 FRFDFKDWKLMKEVVTEGEELLPHRTSQSNL--CNEENDQPNLEARAQITPIRKLTRNRGLVLQDH-VVEETPE-ENQASKRRRLFR 349
BLAST of GT624566 vs. TrEMBL
Match: B9F3U1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_05737 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.116e-12 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEES-VVEESPECDDEDASREAVIR 262 FR+D+ DWK+M+++VPDG+ELMPHR + ++ D P TPIRK++RNRG V+Q++ VV E+PE + R + R Sbjct: 270 FRFDFKDWKLMQEVVPDGEELMPHR-NPENIPCAEDHDQADPPELCAQRTPIRKLTRNRGLVMQQDQMVVAETPEEKQPTSKRRRLFR 356
BLAST of GT624566 vs. TrEMBL
Match: B8AJA9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06217 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.116e-12 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEES-VVEESPECDDEDASREAVIR 262 FR+D+ DWK+M+++VPDG+ELMPHR + ++ D P TPIRK++RNRG V+Q++ VV E+PE + R + R Sbjct: 270 FRFDFKDWKLMQEVVPDGEELMPHR-NPENIPCAEDHDQADPPELCAQRTPIRKLTRNRGLVMQQDQMVVAETPEEKQPTSKRRRLFR 356
BLAST of GT624566 vs. TrEMBL
Match: B6TF46_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.384e-11 Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHRIQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAVIR 262 FR+D+ DWK+MK++V +G+EL+PHR S + E D N +TPIRK++RNRG V Q+ VVEE+PE +++ + R + R Sbjct: 267 FRFDFKDWKLMKEVVTEGEELLPHRTSQSNL--CNEENDQPNLEARAQITPIRKLTRNRGLVFQDH-VVEETPE-ENQASKRRRLFR 349
BLAST of GT624566 vs. TAIR peptide
Match: AT1G51130.1 (| Symbols: | Nse4, component of Smc5/6 DNA repair complex | chr1:18939480-18941560 REVERSE LENGTH=403) HSP 1 Score: 82.8037 bits (203), Expect = 1.649e-16 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 2 FRYDYNDWKIMKDLVPDGKELMPHR---IQHSTVDGSQAEVDGDNPAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAVIRRCKRKL 280 FR D+ DWK+M ++VP G+ELMPHR + S+ + A D Q TPIRK+SRNRG V+QEE+VVE++P D + RRCKR+L Sbjct: 311 FRLDFKDWKLMSEMVPLGEELMPHRQTAVASSSCPAASAPASADF-TQDTQTTPIRKLSRNRGLVVQEETVVEDTP-----DKEGDGTRRRCKRRL 400 The following BLAST results are available for this feature:
BLAST of GT624566 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624566 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624566 ID=GT624566; Name=GT624566; organism=Lens culinaris; type=EST; length=628bpback to top |