GT624571

EST Overview
NameGT624571
Unique NameGT624571
TypeEST
OrganismLens culinaris (lentil)
Sequence length848
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT624571 vs. TrEMBL
Match: B6SLU1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.941e-12
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQVYI 199
            MGGGNGQK+KMARERNLEK KG KGSQLETNKKAMSIQ+++
Sbjct:    1 MGGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQIFL 41          
BLAST of GT624571 vs. TrEMBL
Match: C5WVL3_SORBI (Putative uncharacterized protein Sb01g031840 OS=Sorghum bicolor GN=Sb01g031840 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.336e-11
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQ 190
            MGGGNGQK+KMARERNLEK KG KGSQLETNKKAMSIQ
Sbjct:    1 MGGGNGQKSKMARERNLEKNKGSKGSQLETNKKAMSIQ 38          
BLAST of GT624571 vs. TrEMBL
Match: B6SIA6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.336e-11
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQ 190
            MGGGNGQK+KMARERNLEK KG KGSQLETNKKAMSIQ
Sbjct:    1 MGGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQ 38          
BLAST of GT624571 vs. TrEMBL
Match: Q75KB8_ORYSJ (Expressed protein, having alternate splicing products OS=Oryza sativa subsp. japonica GN=OSJNBa0054H04.31 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.432e-11
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQVYI 199
            MGGGNGQK++MARERN+EK KG KGSQLETNKKAM+IQV +
Sbjct:    1 MGGGNGQKSRMARERNMEKAKGAKGSQLETNKKAMNIQVLV 41          
BLAST of GT624571 vs. TrEMBL
Match: Q9ZRV8_CICAR (Putative uncharacterized protein OS=Cicer arietinum PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.706e-11
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQK-GGKGSQLETNKKAMSIQ 190
            MGGGNGQKAKMARERNLEKQK  GKGSQLETNKKAMSIQ
Sbjct:    1 MGGGNGQKAKMARERNLEKQKNAGKGSQLETNKKAMSIQ 39          
BLAST of GT624571 vs. TrEMBL
Match: B9IBV2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_663761 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.706e-11
Identity = 36/41 (87.80%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQK-GGKGSQLETNKKAMSIQVY 196
            MGGGNGQKAKMARE+NLEKQK G KGSQLE+NKKAMSIQV+
Sbjct:    1 MGGGNGQKAKMAREKNLEKQKAGSKGSQLESNKKAMSIQVF 41          
BLAST of GT624571 vs. TrEMBL
Match: Q851T2_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0051C19.14 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.268e-10
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQV 193
            MGGGNGQK++MARERN+EK KG KGSQLETNKKAM+IQV
Sbjct:    1 MGGGNGQKSRMARERNMEKAKGAKGSQLETNKKAMNIQV 39          
BLAST of GT624571 vs. TrEMBL
Match: Q0DQW9_ORYSJ (Os03g0439800 protein OS=Oryza sativa subsp. japonica GN=Os03g0439800 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.268e-10
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQV 193
            MGGGNGQK++MARERN+EK KG KGSQLETNKKAM+IQV
Sbjct:    1 MGGGNGQKSRMARERNMEKAKGAKGSQLETNKKAMNIQV 39          
BLAST of GT624571 vs. TrEMBL
Match: B6T0B0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.656e-10
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQVYI 199
            MGGGNGQK+KMARERN EK KGGKGSQLE NKKAM+IQ  I
Sbjct:    1 MGGGNGQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKI 41          
BLAST of GT624571 vs. TrEMBL
Match: Q0H639_SORBI (Putative uncharacterized protein OS=Sorghum bicolor GN=Sb02g001100 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.162e-10
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQKGGKGSQLETNKKAMSIQVYI 199
            MGGGNGQK+KMARERN EK KG KGSQLETNKKAM+IQ  I
Sbjct:    1 MGGGNGQKSKMARERNAEKNKGSKGSQLETNKKAMNIQCKI 41          
BLAST of GT624571 vs. SwissProt
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 7.091e-8
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQK-GGKGSQLETNKKAMSIQ 190
            MGGGN QK+ MAR +NLEK K  GKGSQLE NKKAMSIQ
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQ 39          
BLAST of GT624571 vs. TAIR peptide
Match: AT2G23090.1 (| Symbols: | Uncharacterised protein family SERF | chr2:9829657-9830274 REVERSE LENGTH=78)

HSP 1 Score: 58.151 bits (139), Expect = 6.976e-9
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 2
Query:   77 MGGGNGQKAKMARERNLEKQK-GGKGSQLETNKKAMSIQ 190
            MGGGN QK+ MAR +NLEK K  GKGSQLE NKKAMSIQ
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQ 39          
The following BLAST results are available for this feature:
BLAST of GT624571 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B6SLU1_MAIZE3.941e-1285.37Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
C5WVL3_SORBI3.336e-1192.11Putative uncharacterized protein Sb01g031840 OS=So... [more]
B6SIA6_MAIZE3.336e-1192.11Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
Q75KB8_ORYSJ7.432e-1180.49Expressed protein, having alternate splicing produ... [more]
Q9ZRV8_CICAR9.706e-1194.87Putative uncharacterized protein OS=Cicer arietinu... [more]
B9IBV2_POPTR9.706e-1187.80Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q851T2_ORYSJ1.268e-1084.62Expressed protein OS=Oryza sativa subsp. japonica ... [more]
Q0DQW9_ORYSJ1.268e-1084.62Os03g0439800 protein OS=Oryza sativa subsp. japoni... [more]
B6T0B0_MAIZE1.656e-1082.93Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
Q0H639_SORBI2.162e-1082.93Putative uncharacterized protein OS=Sorghum bicolo... [more]
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BLAST of GT624571 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH7.091e-876.92Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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BLAST of GT624571 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G23090.16.976e-976.92| Symbols: | Uncharacterised protein family SERF ... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007513Uncharacterised protein family SERFPFAMPF044194F5coord: 28..63
score: 2.5
NoneNo IPR availableGENE3D4.10.1050.10no descriptioncoord: 26..66
score: 5.1
NoneNo IPR availableSUPERFAMILY118359Expressed protein At2g23090/F21P24.15coord: 18..63
score: 7.8
NoneNo IPR availableSEGsegsegcoord: 135..139
score
NoneNo IPR availableSEGsegsegcoord: 2..13
score
NoneNo IPR availableSEGsegsegcoord: 41..45
score
NoneNo IPR availableSEGsegsegcoord: 54..65
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624571 ID=GT624571; Name=GT624571; organism=Lens culinaris; type=EST; length=848bp
CTCACATCGCTCACTCCTCCTTGTTAAGGAAATTAGGGTTTTGAGGGGTC
TCTCGTTTCGTCCTACCCGATCAGCCATGGGAGGAGGCAACGGCCAAAAG
GCTAAGATGGCCCGCGAGAGGAACCTCGAGAAGCAGAAGGGTGGCAAAGG
AAGCCAGCTTGAAACAAACAAGAAAGCCATGTCGATCCAGGTATACATCC
TGTTTTTATTCTAGATTTCTGAGAATTCTTTCTTTTAAATATGACTGCTC
CATAGATCTTGATTATAAATCTGCTGTATTCGACGTTTTTCTTTGTAACT
CAGATTCAACTGTTAGTTTCACCAATTTGTTTATGGCTACTCTAGGGTTT
CTCTGTTTTGCTCTGATCCACTTCATTCTTGGGCTAGGGATTTTTTTTAA
TGATCTGTGTTATATATTTCTCACACTTTGTGGGATAAAGCTTGGTTGTT
GTTGTTGTTGTTTTGCATTTAGGATCCCGTGTTCGTAATTATGGTTGTAT
AATTTGAGATCTATTATAGAGAATGTAAACAGGATCATTCGAACGAGGAA
GTATTCTTTGAAAGAGGTCATTTTCAGAGGTTAAACATTTGGGTGGAAAT
TATTAGGATCATTTTGTTTTCATGTATTTGTGTCATATCGGAACTTTCAC
TGAGGTATTTCACATCTGCATCACATACTTGCACTAATTCTTTACGTTTA
TGGAGTTGGGTTGGGAGAGAATATGAAGGGAAGGAATCAATATGATTGTT
TTATGTTATACAAACAAGTTAAAGGAGTTTCAGGGTTGAGCTCGAATATA
ATGGACACCAGTACATTTTTACCATTTTGTCTTAACCTCTAGTTAAGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR007513SERF-like_N