GT624764
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624764 vs. TrEMBL
Match: B9GS58_POPTR (AP2/ERF domain-containing transcription factor OS=Populus trichocarpa GN=ERF41 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.127e-19 Identity = 58/127 (45.67%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSY--FVAPTIFPMPPTHDGRHVAFWGPPVCF----------TTGAPVRSEYKGYKL----ENIVASKVEEKKKPFLFDLNLPAPL 335 EIRDPW+KTR+WLGTFDT LRGPKA+TNF + +AP F + W PV T APVRSEY+GYK+ EN+ EEK++P LFDLNLPAPL Sbjct: 52 EIRDPWKKTRRWLGTFDTAEEAALAYDEAARSLRGPKARTNFFHRDHLAPLPFLQTTVVGAGGLKIWCSPVFLSDEVSRMAAPTAVAPVRSEYQGYKIESVDENVGLVLNEEKQRPLLFDLNLPAPL 178
BLAST of GT624764 vs. TrEMBL
Match: B9H8I3_POPTR (AP2/ERF domain-containing transcription factor OS=Populus trichocarpa GN=ERF42 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.514e-16 Identity = 54/131 (41.22%), Postives = 61/131 (46.56%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSY--FVAPTIFPMPPTHDGRHVAFWGPPVCFT---------TGAPVRSEYKGYKLENI---------VASKVEEKKKPFLFDLNLPAPL 335 EIRDPW+K R WLGTFDT LRGPKA+TNF + AP F PVC +PVRSEY GY +E + K+ KKPFLFDLNLPAPL Sbjct: 44 EIRDPWKKKRSWLGTFDTAEEAALAYDEAARSLRGPKARTNFFHNDHFAPVPFSQTAVVGAGVFEKCCSPVCLAGEVARMTMPAASPVRSEYTGYNMETVNENVGLVLNEEKKLRGGKKPFLFDLNLPAPL 174
BLAST of GT624764 vs. TrEMBL
Match: D7TXI4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_81.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036228001 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.374e-14 Identity = 57/124 (45.97%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTHDGR----HVAFWGPPVCF--TTGAP--VRSEYKGYKLENI---VASKVEE--KKKPFLFDLNLPAPL 335 EIRDPW+KTRKWLGTFDT LRGPKAKTNFS + + R +VA G VCF T G P + + + GYK + + V S+VEE KKKP FDLNLP L Sbjct: 47 EIRDPWKKTRKWLGTFDTAEEAARAYDDAARSLRGPKAKTNFSPVRSLPVVSGFGDRVNRWRAAYVAPDGRTVCFPGTAGGPAEIAAGFSGYKYDAVAVLVRSEVEEKKKKKPLPFDLNLPPSL 170
BLAST of GT624764 vs. TrEMBL
Match: A5BY44_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002078 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.818e-14 Identity = 56/124 (45.16%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTHDGR----HVAFWGPPVCF--TTGAP--VRSEYKGYKLENI---VASKVEE--KKKPFLFDLNLPAPL 335 EIRDPW+KTRKWLGTFDT LRGPKAKTNFS + + R +VA G VCF T P + + + GYK + + V S+VEE KKKP FDLNLP L Sbjct: 47 EIRDPWKKTRKWLGTFDTAEEAARAYDDAARSLRGPKAKTNFSPVRSLPVVSGFGDRVNRWRAAYVAPDGRTVCFPGTAAGPAEIAAGFSGYKYDAVAVLVRSEVEEKKKKKPLPFDLNLPPSL 170
BLAST of GT624764 vs. TrEMBL
Match: D5L121_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D37 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.775e-7 Identity = 29/61 (47.54%), Postives = 33/61 (54.10%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTHDGRH 185 EIRDPW+KTR WLGTFD+ LRGPKAKTN FP+P +D H Sbjct: 49 EIRDPWKKTRVWLGTFDSAEDAARAYDAAARSLRGPKAKTN---------FPIPAEYDNNH 100
BLAST of GT624764 vs. TrEMBL
Match: A9NMP5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.624e-7 Identity = 26/44 (59.09%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSY 134 EIRDPW+KTR WLGTFDT LRGPKAKTNF++ Sbjct: 47 EIRDPWKKTRLWLGTFDTAEEAARAYDNAARNLRGPKAKTNFAF 90
BLAST of GT624764 vs. TrEMBL
Match: D5L0Y9_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D5 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.733e-7 Identity = 30/66 (45.45%), Postives = 33/66 (50.00%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTHDGRHVAFWG 200 EIRDPW+KTR WLGTFD+ LRGPKAKTNF A F PT +G Sbjct: 45 EIRDPWKKTRVWLGTFDSAEDAARAYDAAARILRGPKAKTNFQISCAYPTFYNNPTDPAIEAKLFG 110
BLAST of GT624764 vs. TrEMBL
Match: A9SW67_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189022 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 6.181e-7 Identity = 32/78 (41.03%), Postives = 38/78 (48.72%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTHDGRHVAFWGPPVCFTTGAPVR 236 EIRDPW+KTR WLGTFDT LRG KAKTNFS P PP+ D + V + P++ Sbjct: 38 EIRDPWKKTRVWLGTFDTAEEAARAYDSAARALRGTKAKTNFS--------PPPPSGDDHSMTSQSSTVESLSNGPMK 107
BLAST of GT624764 vs. SwissProt
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.824e-7 Identity = 28/57 (49.12%), Postives = 31/57 (54.39%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTH 173 EIRDPW+KTR WLGTFD+ LRGPKAKTN FP+P H Sbjct: 42 EIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTN---------FPLPYAH 89
BLAST of GT624764 vs. SwissProt
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 9.054e-7 Identity = 24/42 (57.14%), Postives = 26/42 (61.90%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNF 128 EIRDPW+K R WLGTFD+ LRGPKAKTNF Sbjct: 42 EIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNF 83
BLAST of GT624764 vs. TAIR peptide
Match: AT1G50640.1 (| Symbols: ERF3, ATERF3 | ethylene responsive element binding factor 3 | chr1:18757602-18758279 REVERSE LENGTH=225) HSP 1 Score: 53.1434 bits (126), Expect = 1.000e-7 Identity = 24/42 (57.14%), Postives = 26/42 (61.90%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNF 128 EIRDPW+K R WLGTFD+ LRGPKAKTNF Sbjct: 42 EIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNF 83
BLAST of GT624764 vs. TAIR peptide
Match: AT1G28360.1 (| Symbols: ERF12, ATERF12 | ERF domain protein 12 | chr1:9951934-9952503 FORWARD LENGTH=189) HSP 1 Score: 52.7582 bits (125), Expect = 1.306e-7 Identity = 25/42 (59.52%), Postives = 26/42 (61.90%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNF 128 EIRDPW+KTR WLGTFDT LRG KAKTNF Sbjct: 26 EIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNF 67
BLAST of GT624764 vs. TAIR peptide
Match: AT1G24590.1 (| Symbols: DRNL, DRN-LIKE, SOB2, ESR2 | DORNROSCHEN-like | chr1:8714389-8715309 REVERSE LENGTH=306) HSP 1 Score: 52.7582 bits (125), Expect = 1.306e-7 Identity = 28/69 (40.58%), Postives = 34/69 (49.28%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTHDGRHVAFWGPPV 209 EIRDP K R+WLGTFDT +RG KA+TNF ++PMP H F PP+ Sbjct: 72 EIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNF-------VYPMPSLDSYHHRIFSSPPM 133
BLAST of GT624764 vs. TAIR peptide
Match: AT3G20310.1 (| Symbols: ATERF-7, ATERF7, ERF7 | ethylene response factor 7 | chr3:7085957-7086691 REVERSE LENGTH=244) HSP 1 Score: 51.2174 bits (121), Expect = 3.800e-7 Identity = 29/69 (42.03%), Postives = 36/69 (52.17%), Query Frame = 3 Query: 3 EIRDPWRKTRKWLGTFDTXXXXXXXXXXXXXXLRGPKAKTNFSYFVAPTIFPMPPTHDGRHVAFWGPPV 209 EIRDP +K+R WLGTFD+ LRGPKAKTNF +P+ P+ P + PPV Sbjct: 41 EIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPIDCSPS-SPLQPLTYLHNQNLCSPPV 108 The following BLAST results are available for this feature:
BLAST of GT624764 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 8
BLAST of GT624764 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 2
BLAST of GT624764 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624764 ID=GT624764; Name=GT624764; organism=Lens culinaris; type=EST; length=521bpback to top |