GT624786

EST Overview
NameGT624786
Unique NameGT624786
TypeEST
OrganismLens culinaris (lentil)
Sequence length742
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT624786 vs. TrEMBL
Match: B9RHU6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1573700 PE=4 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.572e-40
Identity = 102/180 (56.67%), Postives = 113/180 (62.78%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPK----PNAGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXX-TVSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTPTPSPRSATAKKLASPLRCLSLK 742
            MDF K K KFRK+QK   EK+L DK   +PEEPK     + GD    KS N             FITNEVKRRLKELRRNSFMVLIP                  T S+EWRDVEAEG++WW GFDAV++KYCERMLFFDRM VQ LNE   G     TPSP+SA +KKL SP RCLSLK
Sbjct:    1 MDFFKAK-KFRKAQKPEPEKNLEDKPGPQPEEPKYENVGSVGDNVGNKSANADPGSETEDDDDDFITNEVKRRLKELRRNSFMVLIPEEESCPEEEEDEEEGQGETSSSEWRDVEAEGRKWWSGFDAVYDKYCERMLFFDRMMVQQLNE--NGCPTPLTPSPKSA-SKKLTSPFRCLSLK 176          
BLAST of GT624786 vs. TrEMBL
Match: B9HK28_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_765014 PE=4 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.053e-40
Identity = 101/180 (56.11%), Postives = 110/180 (61.11%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPKPN---AGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXX--TVSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTPTPSPRSATAKKLASPLRCLSLK 742
            MDF K K KFRK+ K G EKDL DK    PEEP+      G+    KS N             FITNEVKRRLKELRRNSFMVLIP                   T  NEWRDVEAEG+QWW GFDA++++YCERMLFFDRM VQ L E   G     TPSPRSA +KKLASP RCLSLK
Sbjct:    1 MDFFKAK-KFRKAHKPGPEKDLEDKPVPHPEEPRNENGGGGESVTSKSANTDPAAEAEDDDDDFITNEVKRRLKELRRNSFMVLIPEEESCAEEEEDEEGEGEGETSPNEWRDVEAEGRQWWGGFDALYDQYCERMLFFDRMSVQQLAE--SGCYTPTTPSPRSA-SKKLASPFRCLSLK 176          
BLAST of GT624786 vs. TrEMBL
Match: D7SS12_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029552001 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.072e-37
Identity = 96/175 (54.86%), Postives = 108/175 (61.71%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPKPNAGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXXTVSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTPTPSPRSATAKKLASPLRCLSLK 742
            MDF K+K KFRK+ K   EKD  DK   +PEEPK   GD +  K  N             FITNEVKRRLKELRR+SFMVLIP                   S+EWRD +AEG+Q W GF+ VF+KYCERMLFFDRM  Q LNE   GS    TPSPRSA +KKL+SP RCLSLK
Sbjct:    1 MDFFKVK-KFRKAHKPNPEKDSEDKPVPQPEEPKNENGD-NMSKPANSDPSGDVEDDDDDFITNEVKRRLKELRRSSFMVLIPEESCPEEEEEEEGEMS---SSEWRDGDAEGRQPWHGFNDVFDKYCERMLFFDRMSAQQLNE--AGSDVPLTPSPRSA-SKKLSSPFRCLSLK 167          
BLAST of GT624786 vs. TrEMBL
Match: A5BN93_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007011 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.072e-37
Identity = 96/175 (54.86%), Postives = 108/175 (61.71%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPKPNAGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXXTVSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTPTPSPRSATAKKLASPLRCLSLK 742
            MDF K+K KFRK+ K   EKD  DK   +PEEPK   GD +  K  N             FITNEVKRRLKELRR+SFMVLIP                   S+EWRD +AEG+Q W GF+ VF+KYCERMLFFDRM  Q LNE   GS    TPSPRSA +KKL+SP RCLSLK
Sbjct:    1 MDFFKVK-KFRKAHKPNPEKDSEDKPVPQPEEPKNENGD-NMSKPANSDPSGDVEDDDDDFITNEVKRRLKELRRSSFMVLIPEESCPEEEEEEEEGEMS--SSEWRDGDAEGRQPWHGFNDVFDKYCERMLFFDRMSAQQLNE--AGSDVPLTPSPRSA-SKKLSSPFRCLSLK 168          
BLAST of GT624786 vs. TrEMBL
Match: D7LAX7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479545 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.833e-36
Identity = 94/184 (51.09%), Postives = 113/184 (61.41%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPKPN---AGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXXT-----VSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTP-TPSPRSATAKKLASPLRCLSLK 742
            MDF +++ KFRKS+K  +EK+  DK   + E+ + +   AG  D  K++ +            FITNEVKRRLKELRRNSFMVLIP                        S+EWRDV AEG QWW GFDAV+EKYCERMLFFDR+  Q L E G G   +P TPSPRSA +KKL+SP RCLSLK
Sbjct:    1 MDFLRVR-KFRKSRKPNLEKEKEDKILAQQEQARSDNTEAGVIDSAKTDEIEDDDDD------FITNEVKRRLKELRRNSFMVLIPEEEEEEEEEESYLDEDDDDGEDKCSSEWRDVVAEGLQWWGGFDAVYEKYCERMLFFDRLSSQQLKETGIGIAPSPSTPSPRSA-SKKLSSPFRCLSLK 176          
BLAST of GT624786 vs. TrEMBL
Match: Q9LTR6_ARATH (Gb|AAF36750.1 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.925e-36
Identity = 95/183 (51.91%), Postives = 111/183 (60.66%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPKPN---AGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXXT----VSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTP-TPSPRSATAKKLASPLRCLSLK 742
            MDF K++ KFRKS+K  +EK+  DK   + E+ +     AG  D  K + +            FITNEVKRRLKELRRNSFMVLIP                       S+EWRDV AEG QWW GFDAV+EKYCERMLFFDR+  Q L E G G   +P TPSPRSA +KKL+SP RCLSLK
Sbjct:    1 MDFLKVR-KFRKSRKPNLEKEKEDKILAQQEQARSENTEAGVIDSGKGDEIEDDDDD------FITNEVKRRLKELRRNSFMVLIPEEEEEEEEESYLDEDDDDGEDKCSSEWRDVVAEGLQWWGGFDAVYEKYCERMLFFDRLSSQQLKETGIGIAPSPSTPSPRSA-SKKLSSPFRCLSLK 175          
BLAST of GT624786 vs. TrEMBL
Match: Q8L795_ARATH (Putative uncharacterized protein At3g20260 OS=Arabidopsis thaliana GN=At3g20260 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.925e-36
Identity = 95/183 (51.91%), Postives = 111/183 (60.66%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPKPN---AGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXXT----VSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTP-TPSPRSATAKKLASPLRCLSLK 742
            MDF K++ KFRKS+K  +EK+  DK   + E+ +     AG  D  K + +            FITNEVKRRLKELRRNSFMVLIP                       S+EWRDV AEG QWW GFDAV+EKYCERMLFFDR+  Q L E G G   +P TPSPRSA +KKL+SP RCLSLK
Sbjct:    1 MDFLKVR-KFRKSRKPNLEKEKEDKILAQQEQARSENTEAGVIDSGKGDEIEDDDDD------FITNEVKRRLKELRRNSFMVLIPEEEEEEEEESYLDEDDDDGEDKCSSEWRDVVAEGLQWWGGFDAVYEKYCERMLFFDRLSSQQLKETGIGIAPSPSTPSPRSA-SKKLSSPFRCLSLK 175          
BLAST of GT624786 vs. TrEMBL
Match: Q6ZBK5_ORYSJ (Os08g0519600 protein OS=Oryza sativa subsp. japonica GN=P0689E12.24-1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.583e-16
Identity = 78/194 (40.21%), Postives = 92/194 (47.42%), Query Frame = 2
Query:  218 MDFSKIKN--KFRKSQKGG---VEKDLVDKA----ALEPEEPKPNAGDP---------DQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIP-XXXXXXXXXXXXXXXXXTVSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTPTPSPRSATAKKLASPLRCLSLK 742
            MDF KIK   K RKS  GG   VE +   KA    A + ++ K    DP         D                   FITNEVKRRLKELR+NSFMVLIP                  + S EW + +        GFD+++EKYCERM  FD+M  Q L +   GS N    SPRSA+  KLAS LR LS K
Sbjct:    1 MDFFKIKKLGKARKSGGGGGEVVESEEETKAGNNAASDEQKGKILEDDPAAAAAGAGMDADAGNGAVEGQEEDDDDDDFITNEVKRRLKELRKNSFMVLIPEEECAEVEEDGEEEEEEGSSSREWMESDVGDGFPLCGFDSLYEKYCERMAVFDKMITQLLKD--PGSFNISKKSPRSAS--KLASTLRNLSFK 190          
BLAST of GT624786 vs. TrEMBL
Match: B8B8U0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29907 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.583e-16
Identity = 78/194 (40.21%), Postives = 92/194 (47.42%), Query Frame = 2
Query:  218 MDFSKIKN--KFRKSQKGG---VEKDLVDKA----ALEPEEPKPNAGDP---------DQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIP-XXXXXXXXXXXXXXXXXTVSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTPTPSPRSATAKKLASPLRCLSLK 742
            MDF KIK   K RKS  GG   VE +   KA    A + ++ K    DP         D                   FITNEVKRRLKELR+NSFMVLIP                  + S EW + +        GFD+++EKYCERM  FD+M  Q L +   GS N    SPRSA+  KLAS LR LS K
Sbjct:    1 MDFFKIKKLGKARKSGGGGGEVVESEEETKAGNNAASDEQKGKILEDDPAAAAAGAGMDADAGNGAVEGQEEDDDDDDFITNEVKRRLKELRKNSFMVLIPEEECAEVEEDGEEEEEEGSSSREWMESDVGDGFPLCGFDSLYEKYCERMAVFDKMITQLLKD--PGSFNISKKSPRSAS--KLASTLRNLSFK 190          
BLAST of GT624786 vs. TrEMBL
Match: B7EKP5_ORYSJ (cDNA clone:J023065D24, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.583e-16
Identity = 78/194 (40.21%), Postives = 92/194 (47.42%), Query Frame = 2
Query:  218 MDFSKIKN--KFRKSQKGG---VEKDLVDKA----ALEPEEPKPNAGDP---------DQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIP-XXXXXXXXXXXXXXXXXTVSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTPTPSPRSATAKKLASPLRCLSLK 742
            MDF KIK   K RKS  GG   VE +   KA    A + ++ K    DP         D                   FITNEVKRRLKELR+NSFMVLIP                  + S EW + +        GFD+++EKYCERM  FD+M  Q L +   GS N    SPRSA+  KLAS LR LS K
Sbjct:    1 MDFFKIKKLGKARKSGGGGGEVVESEEETKAGNNAASDEQKGKILEDDPAAAAAGAGMDADAGNGAVEGQEEDDDDDDFITNEVKRRLKELRKNSFMVLIPEEECAEVEEDGEEEEEEGSSSREWMESDVGDGFPLCGFDSLYEKYCERMAVFDKMITQLLKD--PGSFNISKKSPRSAS--KLASTLRNLSFK 190          
BLAST of GT624786 vs. TAIR peptide
Match: AT3G20260.1 (| Symbols: | Protein of unknown function (DUF1666) | chr3:7064190-7065751 REVERSE LENGTH=437)

HSP 1 Score: 154.451 bits (389), Expect = 5.842e-38
Identity = 95/183 (51.91%), Postives = 111/183 (60.66%), Query Frame = 2
Query:  218 MDFSKIKNKFRKSQKGGVEKDLVDKAALEPEEPKPN---AGDPDQCKSENVXXXXXXXXXXXXFITNEVKRRLKELRRNSFMVLIPXXXXXXXXXXXXXXXXXT----VSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCVQHLNEIGKGSQNTP-TPSPRSATAKKLASPLRCLSLK 742
            MDF K++ KFRKS+K  +EK+  DK   + E+ +     AG  D  K + +            FITNEVKRRLKELRRNSFMVLIP                       S+EWRDV AEG QWW GFDAV+EKYCERMLFFDR+  Q L E G G   +P TPSPRSA +KKL+SP RCLSLK
Sbjct:    1 MDFLKVR-KFRKSRKPNLEKEKEDKILAQQEQARSENTEAGVIDSGKGDEIEDDDDD------FITNEVKRRLKELRRNSFMVLIPEEEEEEEEESYLDEDDDDGEDKCSSEWRDVVAEGLQWWGGFDAVYEKYCERMLFFDRLSSQQLKETGIGIAPSPSTPSPRSA-SKKLSSPFRCLSLK 175          
The following BLAST results are available for this feature:
BLAST of GT624786 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RHU6_RICCO1.572e-4056.67Putative uncharacterized protein OS=Ricinus commun... [more]
B9HK28_POPTR2.053e-4056.11Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SS12_VITVI8.072e-3754.86Whole genome shotgun sequence of line PN40024, sca... [more]
A5BN93_VITVI8.072e-3754.86Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LAX7_ARALY6.833e-3651.09Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LTR6_ARATH8.925e-3651.91Gb|AAF36750.1 OS=Arabidopsis thaliana PE=4 SV=1[more]
Q8L795_ARATH8.925e-3651.91Putative uncharacterized protein At3g20260 OS=Arab... [more]
Q6ZBK5_ORYSJ1.583e-1640.21Os08g0519600 protein OS=Oryza sativa subsp. japoni... [more]
B8B8U0_ORYSI1.583e-1640.21Putative uncharacterized protein OS=Oryza sativa s... [more]
B7EKP5_ORYSJ1.583e-1640.21cDNA clone:J023065D24, full insert sequence OS=Ory... [more]
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BLAST of GT624786 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G20260.15.842e-3851.91| Symbols: | Protein of unknown function (DUF1666... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 50..61
score: NAcoord: 85..101
score
NoneNo IPR availableSEGsegsegcoord: 9..20
score: NAcoord: 68..81
score
NoneNo IPR availableSEGsegsegcoord: 6..30
score: NAcoord: 37..50
score: NAcoord: 54..68
score
NoneNo IPR availableSEGsegsegcoord: 15..24
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624786 ID=GT624786; Name=GT624786; organism=Lens culinaris; type=EST; length=742bp
CACACCTTACCTAGGGTTTTCTTTTTCTTCTCCATTTCCTCTTATGATCC
TCTTCACTACTTCAATGCAGGAAACAACACTCTGCATGCAAACTCATTCA
GATTCATACCTCTAATGTCGCTCACTCTCTCAATCTTCAACATTTCACAC
TTTTACTCCTAAGGTTTTTTTTGGATAGGTTAGGATAGTTTGATATTGAA
AGGTGAGGTGGTAAAACATGGATTTTTCGAAGATTAAAAACAAGTTTAGA
AAATCTCAGAAAGGAGGTGTTGAAAAAGATTTGGTAGACAAGGCTGCGCT
GGAGCCTGAGGAACCGAAGCCTAATGCTGGTGATCCGGATCAGTGTAAAT
CGGAAAATGTAGATTCTGCTGGTGATGCTGAGGAGGACGACGATGATTTT
ATTACGAATGAGGTGAAGAGGAGGCTCAAGGAGTTGAGAAGAAACAGTTT
TATGGTGTTGATTCCTGAAGAAGATTCGTGTTTGGAGGAAGGGGAGGATG
AAGAGGAAGAGGGAGAGACGGTCTCTAATGAATGGAGGGATGTGGAGGCA
GAAGGTCAGCAATGGTGGCGAGGCTTTGATGCTGTTTTTGAAAAGTACTG
TGAAAGAATGCTGTTCTTTGATCGGATGTGCGTGCAGCATCTTAATGAAA
TCGGAAAAGGTTCTCAGAACACTCCAACTCCATCTCCAAGATCTGCTACT
GCAAAGAAGCTGGCCTCTCCTCTGCGGTGTCTTTCCTTGAAA
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