GT624896
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624896 vs. TrEMBL
Match: C6SZF7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.776e-20 Identity = 46/57 (80.70%), Postives = 49/57 (85.96%), Query Frame = 2 Query: 137 RLPSIIPRSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R + P RF RH+VRMAPDEEK+TRRSPLDFPIEWERPKPGRRPDI PQFSPMKT Sbjct: 34 RFRPLTPLPRFRRHLVRMAPDEEKMTRRSPLDFPIEWERPKPGRRPDIFPQFSPMKT 90
BLAST of GT624896 vs. TrEMBL
Match: C6TFY1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.813e-20 Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 2 Query: 143 PSIIPRSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 P + RF RH+VRMAPDEEK+TRRSPLDFPIEWERPKPGRRPDI PQFSPMKT Sbjct: 33 PPLTLLPRFRRHLVRMAPDEEKMTRRSPLDFPIEWERPKPGRRPDIFPQFSPMKT 87
BLAST of GT624896 vs. TrEMBL
Match: D0VEB3_TOBAC (Putative uncharacterized protein (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.248e-18 Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = 2 Query: 161 SRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 SR S +VRMAP+EEK+TRRSPLDFPIEWERPKPGRRPDI PQFSPMKT Sbjct: 77 SRRSSQIVRMAPEEEKMTRRSPLDFPIEWERPKPGRRPDIFPQFSPMKT 125
BLAST of GT624896 vs. TrEMBL
Match: D7L8T2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480607 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.094e-17 Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 2 Query: 158 RSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R+R HVV MAP+EEKLTRR+PLDFPIEWERPKPGRRPDI P+FSPMKT Sbjct: 53 RNRNPLHVVSMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKT 102
BLAST of GT624896 vs. TrEMBL
Match: B6TEN8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.346e-17 Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 2 Query: 158 RSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R R+S VVR APDEEK+T+RSPLDFPIEWERPKPGRRPDI P+FSPMKT Sbjct: 46 RRRWSTLVVRAAPDEEKITKRSPLDFPIEWERPKPGRRPDIFPKFSPMKT 95
BLAST of GT624896 vs. TrEMBL
Match: Q9SII4_ARATH (At2g17240/T23A1.10 OS=Arabidopsis thaliana GN=At2g17240 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.653e-16 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 158 RSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R+R VV MAP+EEKLTRR+PLDFPIEWERPKPGRRPDI P+FSPMKT Sbjct: 51 RNRNQLQVVSMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKT 100
BLAST of GT624896 vs. TrEMBL
Match: D5ADU5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.653e-16 Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 2 Query: 173 RHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R VVRMAPDEEK+T+RSPLDFP+EW+RP+PGRRPDI PQFSPMKT Sbjct: 45 RLVVRMAPDEEKMTKRSPLDFPLEWDRPRPGRRPDIFPQFSPMKT 89
BLAST of GT624896 vs. TrEMBL
Match: A9PBZ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825841 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.465e-16 Identity = 40/43 (93.02%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 179 VVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 VV MAPDEEKLTRRSPLDFPIEWERPKPG RPDI PQFSPMKT Sbjct: 63 VVSMAPDEEKLTRRSPLDFPIEWERPKPGSRPDIFPQFSPMKT 105
BLAST of GT624896 vs. TrEMBL
Match: B6SN44_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.526e-16 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 158 RSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R R+S VV APDEEK+T+RSPLDFPIEWERPKPGRRPDI P+FSPMKT Sbjct: 42 RRRWSTLVVCAAPDEEKITKRSPLDFPIEWERPKPGRRPDIFPKFSPMKT 91
BLAST of GT624896 vs. TrEMBL
Match: B6UA24_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.008e-15 Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 158 RSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R R++ VV APDEEK+T+RSPLDFPIEWERPKPGRRPDI P+FSPMKT Sbjct: 33 RRRWNALVVCAAPDEEKITKRSPLDFPIEWERPKPGRRPDIFPKFSPMKT 82
BLAST of GT624896 vs. TAIR peptide
Match: AT2G17240.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). | chr2:7498178-7498996 FORWARD LENGTH=140) HSP 1 Score: 88.5817 bits (218), Expect = 2.221e-18 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 158 RSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 R+R VV MAP+EEKLTRR+PLDFPIEWERPKPGRRPDI P+FSPMKT Sbjct: 51 RNRNQLQVVSMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKT 100
BLAST of GT624896 vs. TAIR peptide
Match: AT3G24506.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17240.1); Has 4864 Blast hits to 709 proteins in 125 species: Archae - 0; Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410; Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink). | chr3:8928366-8929281 REVERSE LENGTH=149) HSP 1 Score: 85.8853 bits (211), Expect = 1.440e-17 Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 158 RSRFSRHVVRMAPDEEKLTRRSPLDFPIEWERPKPGRRPDILPQFSPMKT 307 ++R VV MAP+EEKLTRR+PLDFPIEWERPKPGRRPDI P+FSPMK+ Sbjct: 59 KTRKQLQVVAMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKS 108 The following BLAST results are available for this feature:
BLAST of GT624896 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624896 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624896 ID=GT624896; Name=GT624896; organism=Lens culinaris; type=EST; length=533bpback to top |