GT625020

EST Overview
NameGT625020
Unique NameGT625020
TypeEST
OrganismLens culinaris (lentil)
Sequence length762
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT625020 vs. TrEMBL
Match: C6TDE0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.250e-39
Identity = 93/186 (50.00%), Postives = 125/186 (67.20%), Query Frame = 3
Query:  162 MEKQSYKQRDMEQRSKSEVIPSLSRSESSAIEVNKCLNADSSAQNLADLAATIPKEHFQSKFSSDMTRLNSLTPEADGGQNLYSFIQNYAVYGTNKEVAGDDEASVMARYNVIKSRADNSHIIANALETPSDIADMLAPQETYNQNQVKFCRDFPIPDKNKANYETSVLARFHVLKSRAAAEDSSS 719
            M+K SY++++ME++SKSEV+PSLS+S+S A +V+      S+A     L AT  +E      S+DM + N++TPE  GGQNL SFI NY V  ++ E   +DE+SVMARY V+K+R D S I  + LE P DIAD  +P+   NQNQV   +D PIP+KN  +YETSVLARFH+LKSR     S+S
Sbjct:    1 MDKHSYQEKEMEKQSKSEVVPSLSQSQSFATKVHHPNPDSSAALKFRVLDATNLEELSCLNISTDMNKPNAMTPEGKGGQNLDSFINNYFVPCSDDEAERNDESSVMARYQVLKARVDQSSI--DNLEEPLDIADKSSPRGRDNQNQVNLSQDSPIPEKNCTDYETSVLARFHILKSRIEGSSSTS 184          
BLAST of GT625020 vs. TrEMBL
Match: D7LSJ4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906237 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.821e-7
Identity = 67/279 (24.01%), Postives = 124/279 (44.44%), Query Frame = 3
Query:    3 NILSENFXXXXXXXXXXEATESQTLLYKNLWLEAEAALCSVSYKNRYNQMKIEMEKQSYKQRDMEQRSKSEV-IPSLSRSESSAIEVNKCLNADSS------AQNLADLAATIPKEHFQ-SKFSSD--------MTR--LNSLTPEADGGQNLYSFIQNYAVYGTNKEVAGDDEASVMARYNVIKSRADNSHIIANALETPSDI-----ADMLAPQETYNQNQVKFCRDFPIPDK------------NKANYETSVLARFHVLKSRAAAEDSSSVSSTE 734
            NIL+ NF          E    QTLLYK+LWLE EAALCS +   RY+++K E++   +  +++   + + +  PSL+  +S  I  N     +++        +  +   T+  +  Q S+F+SD        M+R     L P+      +   I+  +   T +    D    V+ R+ ++K +     + +  L T SDI       +L  QET  + + + C +    D+             ++++ + V+ RF +LK R A +   S+++ +
Sbjct:  584 NILASNFPDG-------EENHPQTLLYKSLWLETEAALCSTTCMARYHRVKNEIDNLKFNNKEISADAATFMQEPSLNPQKSVPIMNNANAEKETTESISKHGSSCGNNVVTMSHDASQCSRFNSDPVDAVLSLMSRSFTGGLRPDVATSVKIPDAIRQESPASTTENKHND----VIDRFQILKQQETERKLKSQKL-TDSDIDVIDRFQILKKQETNRKLKTQNCPETKKGDQEEKLEASVMANIGRSSHVSDVMDRFQILKRREAEQVKRSLNNLD 850          
BLAST of GT625020 vs. TrEMBL
Match: B9I286_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_661625 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.299e-7
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 3
Query:    6 ILSENFXXXXXXXXXXEATESQTLLYKNLWLEAEAALCSVSYKNRYNQMKIEMEKQS 176
            +L++NF          E +ESQ LLYKNLWLEAEA+LC V+  +R+N++KIE+EK S
Sbjct:   20 VLAQNFPIK-------EESESQILLYKNLWLEAEASLCVVNCMDRFNRLKIEIEKGS 69          
BLAST of GT625020 vs. TrEMBL
Match: B9IDG5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_666042 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 9.038e-7
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 3
Query:   54 EATESQTLLYKNLWLEAEAALCSVSYKNRYNQMKIE 161
            E +ESQ LLY+NLWLEAEA+LCSV+Y  R+N+MKIE
Sbjct:   17 EESESQILLYRNLWLEAEASLCSVNYMARFNRMKIE 52          
BLAST of GT625020 vs. TAIR peptide
Match: AT3G49490.1 (| Symbols: | unknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink). | chr3:18344926-18348648 REVERSE LENGTH=953)

HSP 1 Score: 57.3806 bits (137), Expect = 1.011e-8
Identity = 68/282 (24.11%), Postives = 123/282 (43.62%), Query Frame = 3
Query:    3 NILSENFXXXXXXXXXXEATESQTLLYKNLWLEAEAALCSVSYKNRYNQMKIEMEKQSYKQRDMEQRSKSEV-IPSLSRSESSAIEVNKCLNADS------SAQNLADLAATIPKEHFQ-SKFSSDMTR--LNSLTPEADGG------------QNLYSFIQNYAVYGTNKEVAGDDEASVMARYNVIKSRADNSHIIANAL-ETPSDIAD---MLAPQETYNQNQVKFCRDFPIPDK------------NKANYETSVLARFHVLKSRAAAEDSSSVSSTE 734
            NIL+ NF          E    QTLLYKNLWLE EAALCS +   RY+++K E+       +++   + S +  PSL+  +S  I +N   + D+         N    AAT+  +  + S+ +SD     L+ ++    GG               ++ I +     T+     +    V+ R+ ++K +     + +  L ++  D+ D   +L  QET  + + + C +    D+             +++  + V+ RF +LK R A +   S++S +
Sbjct:  620 NILASNFPDG-------EENHPQTLLYKNLWLETEAALCSTTCMARYHRIKNEIGNLKLNNKEISADAVSFMQEPSLNTQKSVPI-MNANADKDTPESIIKHGSNCGKNAATMSHDASESSRINSDPVDAVLSVMSRSFTGGLEQTIRGNLRPDDATFAKIPDAIWQETSASTTENKHREVIDRFQILKEQETERKLKSQKLPDSDIDVIDRFQILKQQETNRKLKAQKCPETKKGDQEDKLEGSVMANMGRSSDVSDVMDRFQILKRREAEQVKKSLNSMD 893          
The following BLAST results are available for this feature:
BLAST of GT625020 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6TDE0_SOYBN5.250e-3950.00Putative uncharacterized protein OS=Glycine max PE... [more]
D7LSJ4_ARALY1.821e-724.01Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9I286_POPTR5.299e-752.63Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9IDG5_POPTR9.038e-772.22Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of GT625020 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G49490.11.011e-824.11| Symbols: | unknown protein; Has 722 Blast hits ... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..18
score
NoneNo IPR availableSEGsegsegcoord: 8..17
score
NoneNo IPR availableSEGsegsegcoord: 52..64
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT625020 ID=GT625020; Name=GT625020; organism=Lens culinaris; type=EST; length=762bp
AGAATATTCTTAGTGAGAATTTTGATGATGATGATGATGATGATGATGAT
GATGAAGCAACAGAGTCTCAGACTCTATTGTATAAAAATCTATGGCTTGA
GGCTGAAGCTGCACTATGTTCCGTCTCTTACAAAAATCGCTATAATCAAA
TGAAGATTGAAATGGAGAAACAATCATACAAGCAAAGAGACATGGAGCAG
CGTTCAAAATCTGAAGTTATTCCTAGTTTAAGCAGGAGTGAGAGTTCTGC
AATTGAAGTTAACAAATGTCTAAACGCTGATTCTTCTGCTCAGAATTTGG
CCGACTTAGCTGCTACCATTCCAAAGGAACATTTCCAGTCAAAATTTTCG
TCTGATATGACCAGGCTTAATTCATTGACACCTGAAGCAGATGGTGGTCA
AAACTTGTATAGTTTCATTCAGAATTATGCTGTTTATGGCACAAACAAGG
AAGTGGCTGGAGATGACGAGGCTTCTGTTATGGCCAGATACAATGTTATT
AAATCCAGGGCTGACAATTCACACATCATTGCTAATGCTTTGGAGACACC
ATCAGACATAGCAGACATGTTGGCACCTCAAGAAACATATAATCAAAACC
AGGTTAAGTTCTGTCGGGATTTTCCAATTCCTGATAAAAACAAGGCTAAT
TATGAGACATCTGTTTTGGCTAGATTTCATGTTCTCAAGTCAAGGGCTGC
TGCTGAAGATTCAAGTTCTGTATCTTCAACAGAGAAATTGTTTGGATTTT
CTGGTAAAGGAA
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