GT625033
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT625033 vs. TrEMBL
Match: C6T3L0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.851e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 5 VRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 VRSI+TNPDPYNAVVPGIAHLY GDRAKHDDIAAEWTVRFAK Sbjct: 97 VRSIMTNPDPYNAVVPGIAHLYSGDRAKHDDIAAEWTVRFAK 138
BLAST of GT625033 vs. TrEMBL
Match: B9GL37_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_845082 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.593e-13 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+RSI T+PDPYN +VPGIAHLYL DRAKHD++AAEWT+RFAK Sbjct: 127 AIRSIFTHPDPYNPLVPGIAHLYLADRAKHDELAAEWTLRFAK 169
BLAST of GT625033 vs. TrEMBL
Match: B9SM61_RICCO (Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis GN=RCOM_0878930 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.636e-13 Identity = 32/43 (74.42%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+RS+ T+PDPYN +VPGIAHLYL DRAKHD++AA+WT+RFAK Sbjct: 139 AIRSVFTHPDPYNPLVPGIAHLYLADRAKHDELAAQWTMRFAK 181
BLAST of GT625033 vs. TrEMBL
Match: D7SLI1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025431001 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.054e-13 Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+RSI T PDPYNA+VPGIAHLYL DR+KHD++A EWT+RFA+ Sbjct: 486 AIRSIFTKPDPYNALVPGIAHLYLADRSKHDEVATEWTLRFAR 528
BLAST of GT625033 vs. TrEMBL
Match: Q6ZL97_ORYSJ (Putative elicitor inducible beta-1,3-glucanase OS=Oryza sativa subsp. japonica GN=OJ1065_B06.17 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.262e-10 Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+++I+TNPDPY +VP I HLYL DR KHD+IAAEWT+RFA+ Sbjct: 624 AIKAIITNPDPYCPLVPSIGHLYLTDRTKHDEIAAEWTMRFAR 666
BLAST of GT625033 vs. TrEMBL
Match: Q0D571_ORYSJ (Os07g0577400 protein OS=Oryza sativa subsp. japonica GN=Os07g0577400 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.262e-10 Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+++I+TNPDPY +VP I HLYL DR KHD+IAAEWT+RFA+ Sbjct: 160 AIKAIITNPDPYCPLVPSIGHLYLTDRTKHDEIAAEWTMRFAR 202
BLAST of GT625033 vs. TrEMBL
Match: B8B7R6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26598 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.069e-9 Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+++I+TNPDPY +VP I LYL DR KHD+IAAEWT+RFA+ Sbjct: 186 AIKAIITNPDPYCPLVPSIGRLYLTDRTKHDEIAAEWTMRFAR 228
BLAST of GT625033 vs. TrEMBL
Match: C5XCE6_SORBI (Putative uncharacterized protein Sb02g037390 OS=Sorghum bicolor GN=Sb02g037390 PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.632e-8 Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A++ I++NPDPY +V I+ YL DRAKHD+IAAEWT+RFA+ Sbjct: 145 AIKDIISNPDPYTPLVMNISRQYLTDRAKHDEIAAEWTMRFAR 187
BLAST of GT625033 vs. TrEMBL
Match: B6SPY0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.490e-8 Identity = 25/43 (58.14%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A++ I++NPDPY+ ++ I+ YL DRAKHD+IAAEWT+RFA+ Sbjct: 142 AIKDIISNPDPYSPLMMSISRQYLTDRAKHDEIAAEWTMRFAR 184
BLAST of GT625033 vs. TrEMBL
Match: Q0WNL1_ARATH (Ubiquitin-conjugating enzyme COP10 OS=Arabidopsis thaliana GN=At3g13550 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 5.864e-8 Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+RSI P+PY+ +P IA LYL DR KHD++A EWT+RFAK Sbjct: 140 AIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
BLAST of GT625033 vs. SwissProt
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.276e-9 Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+RSI P+PY+ +P IA LYL DR KHD++A EWT+RFAK Sbjct: 140 AIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
BLAST of GT625033 vs. TAIR peptide
Match: AT3G13550.1 (| Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-conjugating enzyme family protein | chr3:4423569-4424797 REVERSE LENGTH=182) HSP 1 Score: 61.2326 bits (147), Expect = 4.515e-10 Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130 A+RSI P+PY+ +P IA LYL DR KHD++A EWT+RFAK Sbjct: 140 AIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182 The following BLAST results are available for this feature:
BLAST of GT625033 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT625033 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT625033 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT625033 ID=GT625033; Name=GT625033; organism=Lens culinaris; type=EST; length=583bpback to top |