GT625033

EST Overview
NameGT625033
Unique NameGT625033
TypeEST
OrganismLens culinaris (lentil)
Sequence length583
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT625033 vs. TrEMBL
Match: C6T3L0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.851e-16
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2
Query:    5 VRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            VRSI+TNPDPYNAVVPGIAHLY GDRAKHDDIAAEWTVRFAK
Sbjct:   97 VRSIMTNPDPYNAVVPGIAHLYSGDRAKHDDIAAEWTVRFAK 138          
BLAST of GT625033 vs. TrEMBL
Match: B9GL37_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_845082 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.593e-13
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+RSI T+PDPYN +VPGIAHLYL DRAKHD++AAEWT+RFAK
Sbjct:  127 AIRSIFTHPDPYNPLVPGIAHLYLADRAKHDELAAEWTLRFAK 169          
BLAST of GT625033 vs. TrEMBL
Match: B9SM61_RICCO (Ubiquitin-conjugating enzyme E2, putative OS=Ricinus communis GN=RCOM_0878930 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.636e-13
Identity = 32/43 (74.42%), Postives = 40/43 (93.02%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+RS+ T+PDPYN +VPGIAHLYL DRAKHD++AA+WT+RFAK
Sbjct:  139 AIRSVFTHPDPYNPLVPGIAHLYLADRAKHDELAAQWTMRFAK 181          
BLAST of GT625033 vs. TrEMBL
Match: D7SLI1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025431001 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.054e-13
Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+RSI T PDPYNA+VPGIAHLYL DR+KHD++A EWT+RFA+
Sbjct:  486 AIRSIFTKPDPYNALVPGIAHLYLADRSKHDEVATEWTLRFAR 528          
BLAST of GT625033 vs. TrEMBL
Match: Q6ZL97_ORYSJ (Putative elicitor inducible beta-1,3-glucanase OS=Oryza sativa subsp. japonica GN=OJ1065_B06.17 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.262e-10
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+++I+TNPDPY  +VP I HLYL DR KHD+IAAEWT+RFA+
Sbjct:  624 AIKAIITNPDPYCPLVPSIGHLYLTDRTKHDEIAAEWTMRFAR 666          
BLAST of GT625033 vs. TrEMBL
Match: Q0D571_ORYSJ (Os07g0577400 protein OS=Oryza sativa subsp. japonica GN=Os07g0577400 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.262e-10
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+++I+TNPDPY  +VP I HLYL DR KHD+IAAEWT+RFA+
Sbjct:  160 AIKAIITNPDPYCPLVPSIGHLYLTDRTKHDEIAAEWTMRFAR 202          
BLAST of GT625033 vs. TrEMBL
Match: B8B7R6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26598 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.069e-9
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+++I+TNPDPY  +VP I  LYL DR KHD+IAAEWT+RFA+
Sbjct:  186 AIKAIITNPDPYCPLVPSIGRLYLTDRTKHDEIAAEWTMRFAR 228          
BLAST of GT625033 vs. TrEMBL
Match: C5XCE6_SORBI (Putative uncharacterized protein Sb02g037390 OS=Sorghum bicolor GN=Sb02g037390 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.632e-8
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A++ I++NPDPY  +V  I+  YL DRAKHD+IAAEWT+RFA+
Sbjct:  145 AIKDIISNPDPYTPLVMNISRQYLTDRAKHDEIAAEWTMRFAR 187          
BLAST of GT625033 vs. TrEMBL
Match: B6SPY0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.490e-8
Identity = 25/43 (58.14%), Postives = 36/43 (83.72%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A++ I++NPDPY+ ++  I+  YL DRAKHD+IAAEWT+RFA+
Sbjct:  142 AIKDIISNPDPYSPLMMSISRQYLTDRAKHDEIAAEWTMRFAR 184          
BLAST of GT625033 vs. TrEMBL
Match: Q0WNL1_ARATH (Ubiquitin-conjugating enzyme COP10 OS=Arabidopsis thaliana GN=At3g13550 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.864e-8
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+RSI   P+PY+  +P IA LYL DR KHD++A EWT+RFAK
Sbjct:  140 AIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182          
BLAST of GT625033 vs. SwissProt
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.276e-9
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+RSI   P+PY+  +P IA LYL DR KHD++A EWT+RFAK
Sbjct:  140 AIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182          
BLAST of GT625033 vs. TAIR peptide
Match: AT3G13550.1 (| Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-conjugating enzyme family protein | chr3:4423569-4424797 REVERSE LENGTH=182)

HSP 1 Score: 61.2326 bits (147), Expect = 4.515e-10
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 2
Query:    2 AVRSILTNPDPYNAVVPGIAHLYLGDRAKHDDIAAEWTVRFAK 130
            A+RSI   P+PY+  +P IA LYL DR KHD++A EWT+RFAK
Sbjct:  140 AIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182          
The following BLAST results are available for this feature:
BLAST of GT625033 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T3L0_SOYBN5.851e-1695.24Putative uncharacterized protein OS=Glycine max PE... [more]
B9GL37_POPTR1.593e-1379.07Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SM61_RICCO4.636e-1374.42Ubiquitin-conjugating enzyme E2, putative OS=Ricin... [more]
D7SLI1_VITVI6.054e-1374.42Whole genome shotgun sequence of line PN40024, sca... [more]
Q6ZL97_ORYSJ1.262e-1067.44Putative elicitor inducible beta-1,3-glucanase OS=... [more]
Q0D571_ORYSJ1.262e-1067.44Os07g0577400 protein OS=Oryza sativa subsp. japoni... [more]
B8B7R6_ORYSI1.069e-965.12Putative uncharacterized protein OS=Oryza sativa s... [more]
C5XCE6_SORBI2.632e-860.47Putative uncharacterized protein Sb02g037390 OS=So... [more]
B6SPY0_MAIZE4.490e-858.14Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q0WNL1_ARATH5.864e-860.47Ubiquitin-conjugating enzyme COP10 OS=Arabidopsis ... [more]
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BLAST of GT625033 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
COP10_ARATH4.276e-960.47Constitutive photomorphogenesis protein 10 OS=Arab... [more]
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BLAST of GT625033 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G13550.14.515e-1060.47| Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-c... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 29..43
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT625033 ID=GT625033; Name=GT625033; organism=Lens culinaris; type=EST; length=583bp
TGCAGTGAGATCAATTTTGACAAATCCCGACCCTTATAATGCTGTTGTTC
CTGGCATTGCTCACTTATATTTGGGAGACAGAGCAAAACATGATGATATT
GCTGCAGAGTGGACTGTCCGATTCGCCAAGTGAATATGATATAAAAGCCA
TTTGATCGGCTTGGCAGAAGAATGTTAGCAATTTCAAATTCTTTCCAATA
TGCAGTTTATTGTCTGATGACTTTCACTGCACTGGAAATAGTTTGTTGTA
TAGTTTGTCATTAACGTTTTTCTACATCTTATATATCATATTCCAATATT
TGTGTAAATGAGAATGATGGTTCATTGTTCATTCATACACTTGTTACAAG
CTTACCTCCATCAAGCTTTGATAGTAAACGAGGTATGCGGCATATGAGTA
CCCCAGTTATTACAAGAAACCCCCAGATGAACTTTAGCCATATTTTTCAA
TGTTTGCCATCTTAATCTAGTTCAACTGCTATTGTTCTGTATGATTAGCT
GAATCATGTCTATAATGACTAAAAGCTCACTATTTCTTGCATAATATAAT
GCAGGGGCTAATCCTTAAGGTCATGTCATTCTT
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