GT625161
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT625161 vs. TrEMBL
Match: D7U0K9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017107001 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 5.013e-25 Identity = 98/263 (37.26%), Postives = 138/263 (52.47%), Query Frame = 1 Query: 151 LYMQPTPMTPNCTSKALS-LLDTKKG-YTSFVGGILPANRSSLSS-DRRLTVGCDSSSDTRGTIMHKRRTVL-----------SQEPGGFDSGDSCQLGEK-SKNMLIAPCLTKKRRFIAGVYDLKQHFGNS--------NEQS---------------LPASQNALGDINLQCEDNETSQSRNIEFLRQKDN-LPSGSTPSTADGTQGLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822 LY+Q M + K LS +L+ K+G ++S +GG+LPANRSSL+ ++ ++ S SD + K++++L S+ P F+S LGEK SK ++ C KKRR D Q+F S N QS LP N + + S ++ EFL QK + S P + T+G FL QV++KLS AEY +FVG+MKALK+K +KI +VL +I+RLFSGPERLPLLK Sbjct: 71 LYLQTISMDKDKFVKPLSSVLEAKRGNFSSQLGGVLPANRSSLTPYEQNQSLTLSSPSD----LFSKKKSLLIPGRKIMQCSNSEMPYSFNSS---LLGEKPSKEEVLVTCTAKKRRIAKLDPDAMQNFEMSHHHPFMVKNAQSNDHLANHSVKHDNSQLPDGTNRETQVGSAMLLEDDSPKKDAEFLSQKGKGVQSSPLPCSVKETRGSAFLIQVQEKLSTAEYKEFVGFMKALKSKAMKIGQVLESIARLFSGPERLPLLK 326
BLAST of GT625161 vs. TrEMBL
Match: B9SQD1_RICCO (Regulator of telomere elongation helicase 1 rtel1, putative OS=Ricinus communis GN=RCOM_0980890 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.011e-19 Identity = 79/233 (33.91%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 163 PTPMTPNCTSK-ALSLLDTKKGYTSF-VGGILPANRSSLSSDRRLTVGCDSSSDTRGTIMHKRRTVL--SQEPGGFDSGDSCQLGEKS-------KNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPAS-QNALGDINLQCEDNETSQSRNIEFLRQKDN-LPSGSTPSTADGTQGLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822 PTP + K + SLL + G S + +LPANRSSL++ + D ++HK + +L ++ ++ + L EKS + L+ P KKRR + +D+ NS E + + QNA L D ++ + E L QK + + P + + +G FL QV++KL+AAEY +FVG+MKALK+K ++I VL +I +LFSGP+R PLLK Sbjct: 759 PTPQDQSPGVKLSSSLLKVRGGKESKQLQEVLPANRSSLTTFKE---NHDFKPKFSSGLIHKEKILLISGRKDIQCENHEIIDLTEKSILDEMPSRENLLVPYSAKKRRGLNSKHDIMGQIANSQEHASSSKRQNAQVVSALPSNDRGITRKVDTELLTQKSKGVQTTLVPCSDEEKRGSAFLIQVKEKLTAAEYKEFVGFMKALKSKAMQIGSVLESIVKLFSGPDRFPLLK 988
BLAST of GT625161 vs. TrEMBL
Match: Q5ZD38_ORYSJ (DEAH helicase isoform 5-like OS=Oryza sativa subsp. japonica GN=P0710A02.28-1 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.045e-10 Identity = 75/226 (33.19%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 160 QPTPMTPNCTSKALSLLDTKKGYTSFVGGILPANRSSLSSDRRLTVGCDSSSDT--RGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQ---GLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822 Q T ++ N T+K + Y F I PANRS+LS GC S+S G + V+ D S G + K++ P KK + + G D+ G+ Q S+ G + Q T+ S+ N SG+ + G + G FL R+KLS AEY DFV YMKALK KT+ I + L I++LFS PERLPLL+ Sbjct: 651 QRTALSVNPTTK-------RSNYIKFAQ-ITPANRSTLSMKH----GCSSTSQLLYSGDKLSTDAQVIDLAA---DVATSHLAGYRFKSL--GP---KKAKVMVGSKDVCFDDGSPKLQHNVESRALAGCLGEQ----STASSKKSNITHAPGN--SGAIHEKSGGQESNAGPAFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLLE 850
BLAST of GT625161 vs. TrEMBL
Match: B9EXU8_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_02439 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.045e-10 Identity = 75/226 (33.19%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 160 QPTPMTPNCTSKALSLLDTKKGYTSFVGGILPANRSSLSSDRRLTVGCDSSSDT--RGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQ---GLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822 Q T ++ N T+K + Y F I PANRS+LS GC S+S G + V+ D S G + K++ P KK + + G D+ G+ Q S+ G + Q T+ S+ N SG+ + G + G FL R+KLS AEY DFV YMKALK KT+ I + L I++LFS PERLPLL+ Sbjct: 800 QRTALSVNPTTK-------RSNYIKFAQ-ITPANRSTLSMKH----GCSSTSQLLYSGDKLSTDAQVIDLAA---DVATSHLAGYRFKSL--GP---KKAKVMVGSKDVCFDDGSPKLQHNVESRALAGCLGEQ----STASSKKSNITHAPGN--SGAIHEKSGGQESNAGPAFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLLE 999
BLAST of GT625161 vs. TrEMBL
Match: B8AB44_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02661 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.045e-10 Identity = 75/226 (33.19%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 160 QPTPMTPNCTSKALSLLDTKKGYTSFVGGILPANRSSLSSDRRLTVGCDSSSDT--RGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQ---GLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822 Q T ++ N T+K + Y F I PANRS+LS GC S+S G + V+ D S G + K++ P KK + + G D+ G+ Q S+ G + Q T+ S+ N SG+ + G + G FL R+KLS AEY DFV YMKALK KT+ I + L I++LFS PERLPLL+ Sbjct: 759 QRTALSVNPTTK-------RSNYIKFAQ-ITPANRSTLSMKH----GCSSTSQLLYSGDKLSTDAQVIDLAA---DVATSHLAGYRFKSL--GP---KKAKVMVGSKDVCFDDGSPKLQHNVESRALAGCLGEQ----STASSKKSNITHAPGN--SGAIHEKSGGQESNAGPAFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLLE 958
BLAST of GT625161 vs. TrEMBL
Match: C5XPK2_SORBI (Putative uncharacterized protein Sb03g026660 OS=Sorghum bicolor GN=Sb03g026660 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.465e-8 Identity = 57/193 (29.53%), Postives = 83/193 (43.01%), Query Frame = 1 Query: 247 ILPANRSSLSSDRRLTVGCDSSSDTRGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQS-LPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQGLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822 I PANRS+L++ T S+ T+ + LSQ+ D D + K KK A D + G+ + S LP + + QCE + ++ N + + GL FL +KLS AEY +FV YMKALK+KT+ L I++LFS P + PLL+ Sbjct: 12 ITPANRSTLTTKHNFT-----STSTKHNFSEDQ---LSQDNKVADMTDDLAIQGHLKEHTFKSLGLKK----AKTTDRSKDVGSDDVSSKLPQNVGSRALSRYQCEGSTPEPKKSTTATACGKNEATCEKSEGQESNSGLAFLKLAHEKLSTAEYKEFVEYMKALKSKTMDTKVSLEAITKLFSSPGKFPLLE 192
BLAST of GT625161 vs. TAIR peptide
Match: AT1G79950.1 (| Symbols: | RAD3-like DNA-binding helicase protein | chr1:30073580-30079537 FORWARD LENGTH=1040) HSP 1 Score: 54.6842 bits (130), Expect = 7.376e-8 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 571 TSQSRNIEFLRQKDNLPS--GSTPS---TADGTQGLE--------FLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLL 819 +S N L++K +P GS S TA G G + FL+QV++KL+ EY F+GYM+ALK K +K+ V+ +I +LF G ER LL Sbjct: 912 SSTCLNTMGLKKKRKVPESQGSASSSVLTAKGNGGGDKKEASASAFLSQVKEKLNTEEYKKFIGYMQALKKKEIKLANVMQSIVQLFCGSERDHLL 1007 The following BLAST results are available for this feature:
BLAST of GT625161 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 6
BLAST of GT625161 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT625161 ID=GT625161; Name=GT625161; organism=Lens culinaris; type=EST; length=823bpback to top |