GT625161

EST Overview
NameGT625161
Unique NameGT625161
TypeEST
OrganismLens culinaris (lentil)
Sequence length823
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT625161 vs. TrEMBL
Match: D7U0K9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017107001 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 5.013e-25
Identity = 98/263 (37.26%), Postives = 138/263 (52.47%), Query Frame = 1
Query:  151 LYMQPTPMTPNCTSKALS-LLDTKKG-YTSFVGGILPANRSSLSS-DRRLTVGCDSSSDTRGTIMHKRRTVL-----------SQEPGGFDSGDSCQLGEK-SKNMLIAPCLTKKRRFIAGVYDLKQHFGNS--------NEQS---------------LPASQNALGDINLQCEDNETSQSRNIEFLRQKDN-LPSGSTPSTADGTQGLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822
            LY+Q   M  +   K LS +L+ K+G ++S +GG+LPANRSSL+  ++  ++   S SD    +  K++++L           S+ P  F+S     LGEK SK  ++  C  KKRR      D  Q+F  S        N QS               LP   N    +       + S  ++ EFL QK   + S   P +   T+G  FL QV++KLS AEY +FVG+MKALK+K +KI +VL +I+RLFSGPERLPLLK
Sbjct:   71 LYLQTISMDKDKFVKPLSSVLEAKRGNFSSQLGGVLPANRSSLTPYEQNQSLTLSSPSD----LFSKKKSLLIPGRKIMQCSNSEMPYSFNSS---LLGEKPSKEEVLVTCTAKKRRIAKLDPDAMQNFEMSHHHPFMVKNAQSNDHLANHSVKHDNSQLPDGTNRETQVGSAMLLEDDSPKKDAEFLSQKGKGVQSSPLPCSVKETRGSAFLIQVQEKLSTAEYKEFVGFMKALKSKAMKIGQVLESIARLFSGPERLPLLK 326          
BLAST of GT625161 vs. TrEMBL
Match: B9SQD1_RICCO (Regulator of telomere elongation helicase 1 rtel1, putative OS=Ricinus communis GN=RCOM_0980890 PE=4 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.011e-19
Identity = 79/233 (33.91%), Postives = 122/233 (52.36%), Query Frame = 1
Query:  163 PTPMTPNCTSK-ALSLLDTKKGYTSF-VGGILPANRSSLSSDRRLTVGCDSSSDTRGTIMHKRRTVL--SQEPGGFDSGDSCQLGEKS-------KNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPAS-QNALGDINLQCEDNETSQSRNIEFLRQKDN-LPSGSTPSTADGTQGLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822
            PTP   +   K + SLL  + G  S  +  +LPANRSSL++ +      D        ++HK + +L   ++    ++ +   L EKS       +  L+ P   KKRR +   +D+     NS E +  +  QNA     L   D   ++  + E L QK   + +   P + +  +G  FL QV++KL+AAEY +FVG+MKALK+K ++I  VL +I +LFSGP+R PLLK
Sbjct:  759 PTPQDQSPGVKLSSSLLKVRGGKESKQLQEVLPANRSSLTTFKE---NHDFKPKFSSGLIHKEKILLISGRKDIQCENHEIIDLTEKSILDEMPSRENLLVPYSAKKRRGLNSKHDIMGQIANSQEHASSSKRQNAQVVSALPSNDRGITRKVDTELLTQKSKGVQTTLVPCSDEEKRGSAFLIQVKEKLTAAEYKEFVGFMKALKSKAMQIGSVLESIVKLFSGPDRFPLLK 988          
BLAST of GT625161 vs. TrEMBL
Match: Q5ZD38_ORYSJ (DEAH helicase isoform 5-like OS=Oryza sativa subsp. japonica GN=P0710A02.28-1 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.045e-10
Identity = 75/226 (33.19%), Postives = 103/226 (45.58%), Query Frame = 1
Query:  160 QPTPMTPNCTSKALSLLDTKKGYTSFVGGILPANRSSLSSDRRLTVGCDSSSDT--RGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQ---GLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822
            Q T ++ N T+K       +  Y  F   I PANRS+LS       GC S+S     G  +     V+       D   S   G + K++   P   KK + + G  D+    G+   Q    S+   G +  Q     T+ S+         N  SG+    + G +   G  FL   R+KLS AEY DFV YMKALK KT+ I + L  I++LFS PERLPLL+
Sbjct:  651 QRTALSVNPTTK-------RSNYIKFAQ-ITPANRSTLSMKH----GCSSTSQLLYSGDKLSTDAQVIDLAA---DVATSHLAGYRFKSL--GP---KKAKVMVGSKDVCFDDGSPKLQHNVESRALAGCLGEQ----STASSKKSNITHAPGN--SGAIHEKSGGQESNAGPAFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLLE 850          
BLAST of GT625161 vs. TrEMBL
Match: B9EXU8_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_02439 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.045e-10
Identity = 75/226 (33.19%), Postives = 103/226 (45.58%), Query Frame = 1
Query:  160 QPTPMTPNCTSKALSLLDTKKGYTSFVGGILPANRSSLSSDRRLTVGCDSSSDT--RGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQ---GLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822
            Q T ++ N T+K       +  Y  F   I PANRS+LS       GC S+S     G  +     V+       D   S   G + K++   P   KK + + G  D+    G+   Q    S+   G +  Q     T+ S+         N  SG+    + G +   G  FL   R+KLS AEY DFV YMKALK KT+ I + L  I++LFS PERLPLL+
Sbjct:  800 QRTALSVNPTTK-------RSNYIKFAQ-ITPANRSTLSMKH----GCSSTSQLLYSGDKLSTDAQVIDLAA---DVATSHLAGYRFKSL--GP---KKAKVMVGSKDVCFDDGSPKLQHNVESRALAGCLGEQ----STASSKKSNITHAPGN--SGAIHEKSGGQESNAGPAFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLLE 999          
BLAST of GT625161 vs. TrEMBL
Match: B8AB44_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02661 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.045e-10
Identity = 75/226 (33.19%), Postives = 103/226 (45.58%), Query Frame = 1
Query:  160 QPTPMTPNCTSKALSLLDTKKGYTSFVGGILPANRSSLSSDRRLTVGCDSSSDT--RGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQSLPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQ---GLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822
            Q T ++ N T+K       +  Y  F   I PANRS+LS       GC S+S     G  +     V+       D   S   G + K++   P   KK + + G  D+    G+   Q    S+   G +  Q     T+ S+         N  SG+    + G +   G  FL   R+KLS AEY DFV YMKALK KT+ I + L  I++LFS PERLPLL+
Sbjct:  759 QRTALSVNPTTK-------RSNYIKFAQ-ITPANRSTLSMKH----GCSSTSQLLYSGDKLSTDAQVIDLAA---DVATSHLAGYRFKSL--GP---KKAKVMVGSKDVCFDDGSPKLQHNVESRALAGCLGEQ----STASSKKSNITHAPGN--SGAIHEKSGGQESNAGPAFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLLE 958          
BLAST of GT625161 vs. TrEMBL
Match: C5XPK2_SORBI (Putative uncharacterized protein Sb03g026660 OS=Sorghum bicolor GN=Sb03g026660 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.465e-8
Identity = 57/193 (29.53%), Postives = 83/193 (43.01%), Query Frame = 1
Query:  247 ILPANRSSLSSDRRLTVGCDSSSDTRGTIMHKRRTVLSQEPGGFDSGDSCQLGEKSKNMLIAPCLTKKRRFIAGVYDLKQHFGNSNEQS-LPASQNALGDINLQCEDNETSQSRNIEFLRQKDNLPSGSTPSTADGTQGLEFLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLLK 822
            I PANRS+L++    T     S+ T+      +   LSQ+    D  D   +    K         KK    A   D  +  G+ +  S LP +  +      QCE +     ++        N  +       +   GL FL    +KLS AEY +FV YMKALK+KT+     L  I++LFS P + PLL+
Sbjct:   12 ITPANRSTLTTKHNFT-----STSTKHNFSEDQ---LSQDNKVADMTDDLAIQGHLKEHTFKSLGLKK----AKTTDRSKDVGSDDVSSKLPQNVGSRALSRYQCEGSTPEPKKSTTATACGKNEATCEKSEGQESNSGLAFLKLAHEKLSTAEYKEFVEYMKALKSKTMDTKVSLEAITKLFSSPGKFPLLE 192          
BLAST of GT625161 vs. TAIR peptide
Match: AT1G79950.1 (| Symbols: | RAD3-like DNA-binding helicase protein | chr1:30073580-30079537 FORWARD LENGTH=1040)

HSP 1 Score: 54.6842 bits (130), Expect = 7.376e-8
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1
Query:  571 TSQSRNIEFLRQKDNLPS--GSTPS---TADGTQGLE--------FLAQVRDKLSAAEYIDFVGYMKALKTKTLKITEVLLNISRLFSGPERLPLL 819
            +S   N   L++K  +P   GS  S   TA G  G +        FL+QV++KL+  EY  F+GYM+ALK K +K+  V+ +I +LF G ER  LL
Sbjct:  912 SSTCLNTMGLKKKRKVPESQGSASSSVLTAKGNGGGDKKEASASAFLSQVKEKLNTEEYKKFIGYMQALKKKEIKLANVMQSIVQLFCGSERDHLL 1007          
The following BLAST results are available for this feature:
BLAST of GT625161 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
D7U0K9_VITVI5.013e-2537.26Whole genome shotgun sequence of line PN40024, sca... [more]
B9SQD1_RICCO7.011e-1933.91Regulator of telomere elongation helicase 1 rtel1,... [more]
Q5ZD38_ORYSJ2.045e-1033.19DEAH helicase isoform 5-like OS=Oryza sativa subsp... [more]
B9EXU8_ORYSJ2.045e-1033.19Putative uncharacterized protein OS=Oryza sativa s... [more]
B8AB44_ORYSI2.045e-1033.19Putative uncharacterized protein OS=Oryza sativa s... [more]
C5XPK2_SORBI1.465e-829.53Putative uncharacterized protein Sb03g026660 OS=So... [more]
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BLAST of GT625161 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G79950.17.376e-839.58| Symbols: | RAD3-like DNA-binding helicase prote... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT625161 ID=GT625161; Name=GT625161; organism=Lens culinaris; type=EST; length=823bp
TGGGAGAAATGCCATCATCAGAGCACTTTACGGACAAATTTCACATGGAA
AAACTTCTGCAACCTTTGGTAATTCCTTGATTGTGCACTATGAAGACACT
TTTTTGAATCATATAATGCTCTATTGTTTTGTACTCCAGCTTGTTAATGA
TTGTACATGCAGCCTACACCAATGACTCCAAATTGTACTTCGAAGGCTTT
ATCTTTGCTTGACACGAAAAAGGGCTACACTTCATTCGTGGGGGGAATTC
TGCCTGCCAATCGCTCATCGCTGTCTTCTGACCGTAGGTTGACTGTAGGA
TGTGACAGTTCGAGTGATACCCGCGGGACAATTATGCATAAAAGGAGGAC
CGTGCTATCACAAGAACCTGGTGGGTTTGATTCGGGTGATAGTTGTCAAC
TGGGTGAAAAATCAAAGAATATGCTAATAGCACCTTGTCTTACCAAGAAG
CGTAGATTTATAGCAGGAGTGTATGATCTAAAGCAACATTTTGGAAATTC
TAACGAGCAATCATTGCCAGCTAGTCAAAATGCTCTAGGTGATATAAATC
TGCAATGTGAAGATAATGAGACCTCTCAAAGTAGAAACATTGAGTTCCTT
AGACAAAAAGACAATCTTCCTTCTGGTTCAACACCTTCTACTGCTGATGG
CACCCAAGGATTAGAATTCCTTGCTCAGGTCCGAGATAAACTCAGTGCTG
CAGAATATATTGACTTTGTTGGTTATATGAAAGCGCTCAAGACCAAAACA
TTGAAAATTACTGAAGTTTTACTAAACATTTCTAGATTGTTCTCTGGACC
TGAGAGGTTACCTCTCCTTAAAA
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