GT622622

EST Overview
NameGT622622
Unique NameGT622622
TypeEST
OrganismLens culinaris (lentil)
Sequence length611
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT622622 vs. TrEMBL
Match: B9HDC4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802322 PE=4 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.335e-40
Identity = 82/145 (56.55%), Postives = 109/145 (75.17%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETSRTVINNWFSDNDLKDDLPSPALNILLF 436
            +NV+SN+  P           WGN +HIE+IK L+ GGF+VIIGTDVTY+ EAILPLFATAKELI+C + N  D  PALILCHIFRRVDEP+LLSAA+Q+GF+LVD+WP  G  +  S++++ +WF +N  ++ +P+ ALNI+ F
Sbjct:  412 QNVASNLRQPSLAKLIMKRLVWGNTEHIEAIKDLNPGGFEVIIGTDVTYIPEAILPLFATAKELISC-DRNGGDQEPALILCHIFRRVDEPSLLSAASQYGFKLVDKWP-LGIPSNPSQSIVGSWFPENGREEYIPNAALNIMYF 554          
BLAST of GT622622 vs. TrEMBL
Match: B9RQS4_RICCO (Actin-binding protein ABP140, putative OS=Ricinus communis GN=RCOM_0706060 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.074e-40
Identity = 82/145 (56.55%), Postives = 112/145 (77.24%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETSRTVINNWFSDNDLKDDLPSPALNILLF 436
            +NV+SN+ +P          +WGN++HI++IK+L++GGFDVIIGTDVTYV EAILPLFA+AKEL+A S  N +D  PALILCHIFRRVDEP++LS A+Q GFRL+D+WP+   S ++S  +I++WF  +  +D +PS ALNI+ F
Sbjct:  354 QNVASNLRAPSLAKLIVKRLKWGNREHIQAIKELNSGGFDVIIGTDVTYVSEAILPLFASAKELMA-SNYNRNDDKPALILCHIFRRVDEPSILSCASQSGFRLIDKWPSE-ISVDSSGGIISSWFPQDGCEDYIPSSALNIMYF 496          
BLAST of GT622622 vs. TrEMBL
Match: D7T573_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_115.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012573001 PE=4 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.655e-40
Identity = 79/145 (54.48%), Postives = 111/145 (76.55%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETSRTVINNWFSDNDLKDDLPSPALNILLF 436
            +NV+SN++ P          EWGN+DHIE+IK+L++ GF+VIIGTDVTY+ EAILPLFATAKELI+ +        PALILCH+ RRVDEP++LSAA++FGFRLVD+WPT+   T +S+++I++WF +   ++ +P+ ALNI+ F
Sbjct:  416 ENVASNLQKPFLDKLITKRLEWGNRDHIEAIKELNDEGFEVIIGTDVTYIPEAILPLFATAKELISSNRDAREIWKPALILCHVLRRVDEPSILSAASKFGFRLVDKWPTS-IPTSSSQSIISSWFLEKSSEECIPTTALNIMYF 559          
BLAST of GT622622 vs. TrEMBL
Match: A5AIU7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000861 PE=4 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.476e-39
Identity = 79/145 (54.48%), Postives = 110/145 (75.86%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETSRTVINNWFSDNDLKDDLPSPALNILLF 436
            +NV SN++ P          EWGN+DHIE+IK+L++ GF+VIIGTDVTY+ EAILPLFATAKELI+ +        PALILCH+ RRVDEP++LSAA++FGFRLVD+WPT+   T +S+++I++WF +   ++ +P+ ALNI+ F
Sbjct:  275 ENVXSNLQKPFLDKLITKRLEWGNRDHIEAIKELNDEGFEVIIGTDVTYIPEAILPLFATAKELISSNRDAREIWKPALILCHVLRRVDEPSILSAASKFGFRLVDKWPTS-IPTSSSQSIISSWFLEKSSEECIPTTALNIMYF 418          
BLAST of GT622622 vs. TrEMBL
Match: D7T561_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_115.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012560001 PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.250e-38
Identity = 78/145 (53.79%), Postives = 109/145 (75.17%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETSRTVINNWFSDNDLKDDLPSPALNILLF 436
            +NV SN++ P          EWGN+DHIE+IK+L++ GF+VIIGT VTY+ EAILPLFATAKELI+ +        PALILCH+ RRVDEP++LSAA++FGFRLVD+WPT+   T +S+++I++WF +   ++ +P+ ALNI+ F
Sbjct:  399 ENVVSNLQKPFLDKLITKRLEWGNRDHIEAIKELNDEGFEVIIGTGVTYIPEAILPLFATAKELISSNRDAREIWKPALILCHVLRRVDEPSILSAASKFGFRLVDKWPTS-IPTSSSQSIISSWFLEKSSEECIPTTALNIMYF 542          
BLAST of GT622622 vs. TrEMBL
Match: Q9ASY7_ARATH (At2g26200/T1D16.16 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.903e-36
Identity = 80/148 (54.05%), Postives = 107/148 (72.30%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSD--GHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETS-RTVINNWFSDNDLKDDLPSPALNILLF 436
            +N++ N++S           EWGNK+HIESIK+L+  GF+VI+GTDVTYV EAI+PLF TAKELI     ++ +    PALILCH+FRRVDEP+LLSAA++FGF+L DRW    NS E+    +I++WFS+ DL  ++PS AL+IL F
Sbjct:  165 ENITMNLQSSLLGKLKTSVLEWGNKEHIESIKRLACEGFEVIMGTDVTYVAEAIIPLFETAKELILRKMGDDLEVQEKPALILCHVFRRVDEPSLLSAASKFGFKLADRW--AANSKESPIGNIIDSWFSEKDLVAEIPSSALHILYF 310          
BLAST of GT622622 vs. TrEMBL
Match: O64850_ARATH (Putative uncharacterized protein At2g26200 OS=Arabidopsis thaliana GN=At2g26200 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.903e-36
Identity = 80/148 (54.05%), Postives = 107/148 (72.30%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSD--GHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETS-RTVINNWFSDNDLKDDLPSPALNILLF 436
            +N++ N++S           EWGNK+HIESIK+L+  GF+VI+GTDVTYV EAI+PLF TAKELI     ++ +    PALILCH+FRRVDEP+LLSAA++FGF+L DRW    NS E+    +I++WFS+ DL  ++PS AL+IL F
Sbjct:  417 ENITMNLQSSLLGKLKTSVLEWGNKEHIESIKRLACEGFEVIMGTDVTYVAEAIIPLFETAKELILRKMGDDLEVQEKPALILCHVFRRVDEPSLLSAASKFGFKLADRW--AANSKESPIGNIIDSWFSEKDLVAEIPSSALHILYF 562          
BLAST of GT622622 vs. TrEMBL
Match: D7LCU6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481476 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.915e-35
Identity = 79/147 (53.74%), Postives = 104/147 (70.75%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESN-NSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETS-RTVINNWFSDNDLKDDLPSPALNILLF 436
            +N++ N++S           EWGNK+H ESIK+L+  GF+VIIGTDVTYV EAI+PLF TAKELI     +      PALILCH+FRRVDEP+LLSAA+++GF+L DRW    NS E+    +I++WFS+ DL  ++PS AL+IL F
Sbjct:  417 ENITMNLQSSLLGKLKTGVLEWGNKEHTESIKRLACEGFEVIIGTDVTYVAEAIIPLFETAKELILRKMGDLEMQEKPALILCHVFRRVDEPSLLSAASKYGFKLADRW--AANSMESPIGNIIDSWFSEKDLVAEIPSSALHILYF 561          
BLAST of GT622622 vs. TrEMBL
Match: C5WYU0_SORBI (Putative uncharacterized protein Sb01g047400 OS=Sorghum bicolor GN=Sb01g047400 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.872e-26
Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLS-NG-GFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETSRTVINNWFSDNDLKDDLPSPALNILLF 436
            +N+SSN+E             WGNKD  +++++LS NG GFD IIGTDVTY  +AI PLF TA+ELI  S+  N D  PALILC+I RRVDE ++LS A   GFRLVD+W    N    S  +I++WFS ND+     +  L++L F
Sbjct:  416 QNISSNLEPNSLSRIKIRKLFWGNKDDTQAVRELSGNGAGFDCIIGTDVTYNPDAIHPLFVTARELI--SDRANKDSTPALILCYIQRRVDEDSILSNATSQGFRLVDKWI---NGLHESNGIISSWFSGNDVCSAFRNAVLSVLYF 557          
BLAST of GT622622 vs. TrEMBL
Match: A9NXX5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.070e-25
Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSDGHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETSRTVINNWFSDNDLKDDLPSPALNILLF 436
            +N+ SN E            EWGN +H+ +I+ L+  GFDVIIGTDV YV +AI+PLF TAK LI+  E        ALILCHI R+VDE  +LSAA+Q GF L D+WP+  + +   ++ I +WFS++  K      AL I+ F
Sbjct:  468 ENIKSNAEHLTSSKLVCERLEWGNSEHVNTIRSLNTHGFDVIIGTDVMYVADAIIPLFETAKALISTVEIGKK--KTALILCHIIRQVDEGYILSAASQCGFHLEDKWPSDTDGS-AHKSFIGSWFSNDIHKLQFLQSALRIMYF 609          
BLAST of GT622622 vs. TAIR peptide
Match: AT2G26200.1 (| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:11152875-11156330 FORWARD LENGTH=565)

HSP 1 Score: 153.68 bits (387), Expect = 7.293e-38
Identity = 80/148 (54.05%), Postives = 107/148 (72.30%), Query Frame = 2
Query:    2 KNVSSNIESPXXXXXXXXXXEWGNKDHIESIKKLSNGGFDVIIGTDVTYVHEAILPLFATAKELIACSESNNSD--GHPALILCHIFRRVDEPTLLSAAAQFGFRLVDRWPTTGNSTETS-RTVINNWFSDNDLKDDLPSPALNILLF 436
            +N++ N++S           EWGNK+HIESIK+L+  GF+VI+GTDVTYV EAI+PLF TAKELI     ++ +    PALILCH+FRRVDEP+LLSAA++FGF+L DRW    NS E+    +I++WFS+ DL  ++PS AL+IL F
Sbjct:  417 ENITMNLQSSLLGKLKTSVLEWGNKEHIESIKRLACEGFEVIMGTDVTYVAEAIIPLFETAKELILRKMGDDLEVQEKPALILCHVFRRVDEPSLLSAASKFGFKLADRW--AANSKESPIGNIIDSWFSEKDLVAEIPSSALHILYF 562          
The following BLAST results are available for this feature:
BLAST of GT622622 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HDC4_POPTR1.335e-4056.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RQS4_RICCO5.074e-4056.55Actin-binding protein ABP140, putative OS=Ricinus ... [more]
D7T573_VITVI8.655e-4054.48Whole genome shotgun sequence of line PN40024, sca... [more]
A5AIU7_VITVI1.476e-3954.48Putative uncharacterized protein OS=Vitis vinifera... [more]
D7T561_VITVI1.250e-3853.79Whole genome shotgun sequence of line PN40024, sca... [more]
Q9ASY7_ARATH9.903e-3654.05At2g26200/T1D16.16 OS=Arabidopsis thaliana PE=2 SV... [more]
O64850_ARATH9.903e-3654.05Putative uncharacterized protein At2g26200 OS=Arab... [more]
D7LCU6_ARALY4.915e-3553.74Putative uncharacterized protein OS=Arabidopsis ly... [more]
C5WYU0_SORBI1.872e-2648.30Putative uncharacterized protein Sb01g047400 OS=So... [more]
A9NXX5_PICSI2.070e-2544.83Putative uncharacterized protein OS=Picea sitchens... [more]
back to top
BLAST of GT622622 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G26200.17.293e-3854.05| Symbols: | S-adenosyl-L-methionine-dependent me... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019410Methyltransferase-16, putativePFAMPF10294Methyltransf_16coord: 3..68
score: 3.7
NoneNo IPR availableGENE3D3.40.50.150no descriptioncoord: 2..113
score: 7.2
NoneNo IPR availableSEGsegsegcoord: 11..20
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT622622 ID=GT622622; Name=GT622622; organism=Lens culinaris; type=EST; length=611bp
CAAAAACGTTTCATCAAATATCGAATCGCCACTGCTGAGTAAACTAACTA
CGAAAAAACTAGAGTGGGGAAACAAAGATCACATAGAAAGCATAAAGAAA
CTGAGCAATGGAGGGTTCGATGTAATAATCGGCACCGACGTTACATATGT
TCATGAAGCTATATTACCTTTGTTTGCAACTGCGAAAGAACTTATTGCTT
GTAGTGAAAGTAATAACAGCGATGGTCATCCTGCACTTATTCTTTGCCAT
ATCTTTCGCCGTGTTGACGAACCGACATTGCTTTCAGCTGCAGCGCAATT
CGGGTTTAGATTAGTAGACAGGTGGCCTACTACTGGAAATTCGACTGAAA
CCTCGAGAACCGTTATCAATAATTGGTTTTCGGACAATGATTTAAAAGAT
GATCTTCCTAGTCCAGCATTAAACATATTGCTCTTCTGCAAAGATTGAAA
TCAGATTTTGTACTCTAGCTTGAACTAATGCAAGGTGTTGATTTTTGTTA
CAATACAAAATGAGTAGTAGAATGCTTTTTCCATGTCGATTCATTGTAGC
ACTTCACATTCCATTTGAGTTCATTATGTCATTGATTTATAAGTGTTAAC
AATTTGATTAC
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR019410Methyltransf_16