GT627196
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT627196 vs. TrEMBL
Match: B9SWB9_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0154490 PE=4 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.780e-43 Identity = 115/252 (45.63%), Postives = 150/252 (59.52%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLAPES----PYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGG----CLGASPYRSQGSIARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL LEIP +T + ++ V +KMP +P+P+ ++VNFL T S DA S G S+TRGKS RS++PKL+F+ +R S D EK +LAP+S P EKPSIS S+SLSK+F P++ R SSLPV I N + GG L +S ++ I+R+ S PV+++EK IR+MD FFRIIPSTP VKE L S VCRICL+ELCEGGET KMECSC Sbjct: 46 QKNLFLEIPSRTLDDPS--------QDSVVIKMPPTPSPTPRKVNFLLTPTSSDARACGSP----GPSSTRGKSSLRSLLPKLSFK-SRISMLDAEKAANLAPDSSCTMPREKPSISRSLSLSKIFTPRMKRTSSLPVTSIANSNPDSIRGGSISGALSSSGKGARRQISRSLSVPVNNKEKSIRRMDSFFRIIPSTPRVKEGDVILTASPGIDTETEDSDGEDIPEEEAVCRICLVELCEGGETFKMECSC 284
BLAST of GT627196 vs. TrEMBL
Match: B9HQ98_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821631 PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.168e-41 Identity = 108/251 (43.03%), Postives = 153/251 (60.96%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLAPES---PYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLG----ASPYRSQGSIARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 + NL LEIP +T ++ ++ V ++MP +P+PS ++VNFL T SVDA S + S+++GKS +S++PKL+F+ +R S+ DIEK +LAP++ P +KPSIS S+SL+++F P++ + SSLPV I E A GG +G +S +Q I R+ S PV+++E+ I++MD FFR+IPSTP VKE S VCRICLIELCEGGETLKMECSC Sbjct: 48 RRNLFLEIPSRTLEDSS--------RDSVVIRMPPTPSPSPRKVNFLLTPSSVDARA----SGSPAPSSSKGKSSLKSLLPKLSFK-SRNSTLDIEKAATLAPDASSIPRKKPSISRSLSLTRIFTPRMKQTSSLPVTPIANSKAESARGGSVGGMLNSSRKGTQRQIFRSLSVPVNNKERSIKRMDSFFRMIPSTPQVKEGDTITNASPSVDAESNDVDGEDIPEEEAVCRICLIELCEGGETLKMECSC 285
BLAST of GT627196 vs. TrEMBL
Match: A5BSH1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024209 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.023e-37 Identity = 104/253 (41.11%), Postives = 148/253 (58.50%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA----PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGASPYRSQGS----IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEW-LKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL LEIP + + ++ V +KMP +P+P+ K+VNF T D V S G S T+GKS +S++PKL+F+ NR+++SD +K +LA + EKPSIS S+SLSK+F PK+ R SSLP + N E GG +G++ I+R+ S PV+++++ I++MD FFR+IPSTP VKE+ + +S X VCRICL+ELCEGGETLKMECSC Sbjct: 94 RQNLFLEIPSREMEASS--------QDSVRIKMPPTPSPTPKKVNFFLTPSPSDTRVTGSP----GPSATKGKSSKKSLLPKLSFK-NRSATSDSDKAANLALGGSSTTSREKPSISRSLSLSKIFTPKMXRTSSLPGTPLEHSNPESVSGGSIGSALKSDTRGVHRRISRSLSVPVNNKDRSIKRMDSFFRVIPSTPRVKELDAMTMNSSPAVEAENXEADGEDIPEEEAVCRICLVELCEGGETLKMECSC 333
BLAST of GT627196 vs. TrEMBL
Match: Q9FKI9_ARATH (Emb|CAB86085.1 OS=Arabidopsis thaliana GN=At5g60580 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.754e-35 Identity = 108/250 (43.20%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + +TS++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV + N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFALTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKTSNTDIEKGQGNACSPPASQEKASISRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TrEMBL
Match: Q9ASR2_ARATH (AT5g60580/muf9_230 OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.754e-35 Identity = 108/250 (43.20%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + +TS++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV + N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFALTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKTSNTDIEKGQGNACSPPASQEKASISRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TrEMBL
Match: Q3E882_ARATH (Putative uncharacterized protein At5g60580.2 OS=Arabidopsis thaliana GN=At5g60580 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.754e-35 Identity = 108/250 (43.20%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + +TS++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV + N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFALTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKTSNTDIEKGQGNACSPPASQEKASISRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TrEMBL
Match: D7MTV5_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496205 PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.806e-34 Identity = 108/250 (43.20%), Postives = 143/250 (57.20%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + + S++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV I N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFSLTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKISNTDIEKGQGNACSPSASQEKASISRSLSLSKLFTPRIKRTSSLPVTPIILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGTTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TrEMBL
Match: D7TQK4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025673001 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 9.600e-28 Identity = 103/291 (35.40%), Postives = 144/291 (49.48%), Query Frame = 1 Query: 4 NMSSSCKRTLSLPLHK-------------------ENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMPSPTPSQ--KRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA----PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGG----CLGASPYRSQGSIARTRSEPVDSQEKIIRKMDKF---FRIIPSTPGVKEVKEWLK-TSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 N +C TL P+ K +NL+LEIP +T + ++FV + MP PTP+ KRVNF + +P + + G S ++G+S +S++PKL+F+Y R+S+S+IEK LA EKP + SL+KLF PK+ R SSLPV I N E GG L ++ S I R+ S PV ++++ IR+MD FR++P+TP V EV S VCRIC+IEL EG +TLKMECSC Sbjct: 13 NNGGACNNTLDPPIQKVGISSEIMEEAPRGQQQRHQNLILEIPSRTHE--------GSTEDFVRINMP-PTPNSTPKRVNF----SPMPSPSYTKINVSPGPSPSKGRSSIKSLLPKLSFKY-RSSTSEIEKAAILALGASSTGTREKPLTPRTSSLTKLFTPKMKRTSSLPVSPIAHSNPESMHGGNTIDLLDSAKGGSLLPIHRSHSVPVINKDESIRQMDSLGGVFRVVPTTPRVAEVTVATAIASPTVDAGGNDDDGEDIPEEEAVCRICMIELGEGADTLKMECSC 289
BLAST of GT627196 vs. TrEMBL
Match: A5B9W8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005071 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.793e-27 Identity = 97/256 (37.89%), Postives = 136/256 (53.12%), Query Frame = 1 Query: 52 ENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMPSPTPSQ--KRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA----PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGG----CLGASPYRSQGSIARTRSEPVDSQEKIIRKMDKF---FRIIPSTPGVKEVKEWLK-TSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 +NL+LEIP +T + ++FV + MP PTP+ KRVNF + +P + + G S ++G+S +S++PKL+F+Y R+S+S+IEK LA EKP + SL+KLF PK+ R SSLPV I N E GG L ++ S I R+ S PV ++++ IR+MD FR++P+TP V EV S VCRIC+IEL EG +TLKMECSC Sbjct: 48 QNLILEIPSRTHE--------GSTEDFVRINMP-PTPNSTPKRVNF----SPMPSPSYTKINVSPGPSPSKGRSSIKSLLPKLSFKY-RSSTSEIEKAAILALGASSTGTREKPLTPRTSSLTKLFTPKMKRTSSLPVSPIAHSNPESMHGGNTIDLLDSAKGGSLLPIHRSHSVPVINKDESIRQMDSLGGVFRVVPTTPRVAEVTVATAIASPTVDAGGNDDDGEDIPEEEAVCRICMIELGEGADTLKMECSC 289
BLAST of GT627196 vs. TrEMBL
Match: B9S0M6_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_1356420 PE=4 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.365e-26 Identity = 94/256 (36.72%), Postives = 136/256 (53.12%), Query Frame = 1 Query: 55 NLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLAPESPY----EKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGASPYRS-----QGSIARTRSEPVDSQEKIIRKMDK---FFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXX--VCRICLIELCEGGETLKMECSC 771 +L+LE+P +T +E +FVA++MP +P + KRVNF +P + +++ S ++ KS RS++PKL+F+Y R ++SDIEK LA +KP +S ++S +KLF P+ R SSLPV I N E GG +P S Q I R+RS P+ +E +R++D FR++P+TP EV +SA VCRICL+EL EGG+TLKMECSC Sbjct: 49 DLVLEVPSRTLEEARD--------DFVAIQMPVTPNHTPKRVNF----SPFPSPSLFKINDSPDPSPSKNKSTIRSLLPKLSFKY-RNTTSDIEKAAILALGGSSVEIEKKPFLSRTMSFTKLFTPRTKRTSSLPVTPIAHSNPESMHGG-YATNPSSSAKGDAQKPIHRSRSVPMMDKEGSVRQIDPSGGIFRVVPTTPRPAEVAVTTTSSASPRNDIDGNEDSGEDIPEEEAVCRICLVELGEGGDTLKMECSC 290
BLAST of GT627196 vs. TAIR peptide
Match: AT5G60580.4 (| Symbols: | RING/U-box superfamily protein | chr5:24354298-24356706 FORWARD LENGTH=494) HSP 1 Score: 152.14 bits (383), Expect = 3.094e-37 Identity = 108/250 (43.20%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + +TS++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV + N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFALTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKTSNTDIEKGQGNACSPPASQEKASISRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TAIR peptide
Match: AT5G60580.3 (| Symbols: | RING/U-box superfamily protein | chr5:24354298-24356706 FORWARD LENGTH=487) HSP 1 Score: 152.14 bits (383), Expect = 3.094e-37 Identity = 108/250 (43.20%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + +TS++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV + N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFALTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKTSNTDIEKGQGNACSPPASQEKASISRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TAIR peptide
Match: AT5G60580.2 (| Symbols: | RING/U-box superfamily protein | chr5:24354298-24356706 FORWARD LENGTH=494) HSP 1 Score: 152.14 bits (383), Expect = 3.094e-37 Identity = 108/250 (43.20%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + +TS++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV + N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFALTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKTSNTDIEKGQGNACSPPASQEKASISRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TAIR peptide
Match: AT5G60580.1 (| Symbols: | RING/U-box superfamily protein | chr5:24354298-24356706 FORWARD LENGTH=487) HSP 1 Score: 152.14 bits (383), Expect = 3.094e-37 Identity = 108/250 (43.20%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 49 KENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMP-SPTPSQKRVNFLATSRSVDAPVVDSDSNNTGISTTRGKS--RSIIPKLNFRYNRTSSSDIEKGVSLA--PESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGGCLGA--SPYRSQGS--IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 ++NL L+IP + + ++ V +KMP +P+P+ +RVNF TS S P S S RGKS ++++PK + +TS++DIEKG A P + EK SIS S+SLSKLF P+I R SSLPV + N+E A GG A +P R +GS IAR+RS P++ +E ++ MD FFR+IPSTP VKE + S VCRICL+ELCEGGETLKMECSC Sbjct: 44 RKNLSLQIPSRAA--------GLSPEDSVVIKMPPTPSPTPRRVNFALTSSS-PGPTPTSSS-----VLPRGKSSLKNLLPKAGCK-PKTSNTDIEKGQGNACSPPASQEKASISRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNR-KGSVHIARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCRICLVELCEGGETLKMECSC 277
BLAST of GT627196 vs. TAIR peptide
Match: AT3G09760.1 (| Symbols: | RING/U-box superfamily protein | chr3:2992975-2995451 REVERSE LENGTH=491) HSP 1 Score: 67.3958 bits (163), Expect = 1.002e-11 Identity = 73/257 (28.40%), Postives = 114/257 (44.36%), Query Frame = 1 Query: 43 LHKENLLLEIPYKTSQEXXXXXXXXXXKEFVAVKMPSPTPSQKRVNF--LATSRSVDAPVVDSDSNNTGISTTRGKSRSI---IPKLNFRYNRTSSSD---IEKGVSLA-PESPYEKPSISGSV-SLSKLFAPKIYRASSLPVDEIGRVNTEFAFG----GCLGASPYRSQGSIARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 L + L+L++P T ++ + +P KRVNF +++ R S S++T S++R K S+ IPKL+F+ NR S++D IEK L SP S +L+ + P++ + SLPV I N E G + ++ I R+RS P +++ R++ FR+IP TP + + +K + VCRICL+EL E E KMEC C Sbjct: 45 LWRRGLVLDLPSTTPEDTTRDDLFRRNASLTS------SPVAKRVNFSPMSSPRVGQRGASLSPSSSTS-SSSRNKPNSLKNLIPKLSFK-NRNSNNDNVDIEKAADLGFVSSPSSGNGRDRSTWTLTNILTPRLKKTESLPVTPIAHSNPESTHGRFAVDLVTSTKKGPPLPIHRSRSVPAFNKDGSQRQLG-VFRVIP-TPNMSPTRNTIKLN-----DANVDGAEDVPEEEAVCRICLVELGEDSEAFKMECLC 286
BLAST of GT627196 vs. TAIR peptide
Match: AT5G03180.1 (| Symbols: | RING/U-box superfamily protein | chr5:754201-756411 REVERSE LENGTH=462) HSP 1 Score: 52.373 bits (124), Expect = 3.337e-7 Identity = 57/181 (31.49%), Postives = 73/181 (40.33%), Query Frame = 1 Query: 247 STTRGKSRSIIPKLNFRYNRTSSSDIEKGVSLAPESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGG-CLGASPYRSQGS-----IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXXVCRICLIELCEGGETLKMECSC 771 S + SR+ + NF+ NR S+DIE+GV +K I + SL+ L AP R S I N E G + P S I RTRS P + K FR+IP TP + K T A VCRIC++E+ E E KMEC C Sbjct: 93 SMSPSSSRNRTNQKNFK-NRNHSADIEEGVVSPLGDGSDKSYIPRTWSLTNLLAP---RKSKKTESFITHSNPESMNGRYAVEVDPVTSMKGERLLPIRRTRSVPTFFNKDGSVKPSSVFRVIP-TPSRGDEKRLEMTQASKLNENDDGGEDVPEEEA-VCRICMVEMEEDEEAFKMECMC 267
BLAST of GT627196 vs. TAIR peptide
Match: AT5G03180.2 (| Symbols: | RING/U-box superfamily protein | chr5:754201-756411 REVERSE LENGTH=466) HSP 1 Score: 51.2174 bits (121), Expect = 7.433e-7 Identity = 57/184 (30.98%), Postives = 73/184 (39.67%), Query Frame = 1 Query: 247 STTRGKSRSIIPKLNFRYNRTSSSDIEKGVSLAPESPYEKPSISGSVSLSKLFAPKIYRASSLPVDEIGRVNTEFAFGG-CLGASPYRSQGS-----IARTRSEPVDSQEKIIRKMDKFFRIIPSTPGVKEVKEWLKTSAXXXXXXXXXXXXXXXXXXX---VCRICLIELCEGGETLKMECSC 771 S + SR+ + NF+ NR S+DIE+GV +K I + SL+ L AP R S I N E G + P S I RTRS P + K FR+IP TP + K T A VCRIC++E+ E E KMEC C Sbjct: 93 SMSPSSSRNRTNQKNFK-NRNHSADIEEGVVSPLGDGSDKSYIPRTWSLTNLLAP---RKSKKTESFITHSNPESMNGRYAVEVDPVTSMKGERLLPIRRTRSVPTFFNKDGSVKPSSVFRVIP-TPSRGDEKRLEMTQASKLSKLHDENDDGGEDVPEEEAVCRICMVEMEEDEEAFKMECMC 271 The following BLAST results are available for this feature:
BLAST of GT627196 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT627196 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT627196 ID=GT627196; Name=GT627196; organism=Lens culinaris; type=EST; length=771bpback to top |