GT626125

EST Overview
NameGT626125
Unique NameGT626125
TypeEST
OrganismLens culinaris (lentil)
Sequence length538
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT626125 vs. TrEMBL
Match: C6TCQ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.127e-12
Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQGICRWNH L+S Q+H+KN+V                        + + AKQSEES RTVMYLSCWGPN
Sbjct:   20 LKDQGICRWNHALRSAQHHLKNHVGSFSQANKLSFSAIISTTL-----KHEKAKQSEESFRTVMYLSCWGPN 86          
BLAST of GT626125 vs. TrEMBL
Match: C6T005_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.127e-12
Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQGICRWNH L+S Q+H+KN+V                        + + AKQSEES RTVMYLSCWGPN
Sbjct:   20 LKDQGICRWNHALRSAQHHLKNHVGSFSQANKLSSSAMISTTL-----KHEKAKQSEESFRTVMYLSCWGPN 86          
BLAST of GT626125 vs. TrEMBL
Match: C6SWS5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.390e-12
Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQGICRWNH L+S Q+H+KN+V                        + + A QSEESLRTVMYLSCWGPN
Sbjct:   20 LKDQGICRWNHALRSAQHHLKNHVGSFSQANKLSSSAMISTTL-----KHEKANQSEESLRTVMYLSCWGPN 86          
BLAST of GT626125 vs. TrEMBL
Match: B9SIF6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1255920 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.194e-12
Identity = 33/72 (45.83%), Postives = 41/72 (56.94%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQG+CRWN+  +S+Q H KNN+                        + +  K+SEESLRTVMYLSCWGPN
Sbjct:   20 LKDQGLCRWNYAFRSIQQHAKNNIRRSYSQHPKMLSSLSSSADLSKKLEDEKLKKSEESLRTVMYLSCWGPN 91          
BLAST of GT626125 vs. TrEMBL
Match: Q9SBR5_MEDVA (Putative wound-induced protein OS=Medicago varia GN=wip PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.568e-11
Identity = 37/73 (50.68%), Postives = 44/73 (60.27%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPNN 304
            LKDQG+CRWN  L+S Q+HVK+++                        + Q AKQSEESLRTVMYLSCWGPNN
Sbjct:   20 LKDQGLCRWNCALRSAQHHVKHHLRSLSQANKISSSNSYAMVSSRL--KEQEAKQSEESLRTVMYLSCWGPNN 90          
BLAST of GT626125 vs. TrEMBL
Match: B9SIF3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1255590 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.675e-11
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQG+CRWN+ L+S+Q H KNN+                       +  +  K+SEESLRTVMYLSCWGPN
Sbjct:   20 LKDQGLCRWNYALRSIQQHAKNNIRRSYSQHPKMLSPLSSSAVSKNLKD-EKLKRSEESLRTVMYLSCWGPN 90          
BLAST of GT626125 vs. TrEMBL
Match: A9PDX5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.675e-11
Identity = 36/71 (50.70%), Postives = 41/71 (57.75%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGP 298
            LKDQG CRWN+T++SL +H KN V                       R+ Q AKQSEESLR VMYLSCWGP
Sbjct:   20 LKDQGFCRWNYTIRSLHHHAKNQVKSISQTKKLSSPASTVISRKV--RENQKAKQSEESLRKVMYLSCWGP 88          
BLAST of GT626125 vs. TrEMBL
Match: B9INV4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574589 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.494e-11
Identity = 36/72 (50.00%), Postives = 42/72 (58.33%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQG CRWN+TL+SL +H KN+V                        + + AKQSEESLR VMYLSCWGPN
Sbjct:   20 LKDQGFCRWNYTLRSLHHHAKNHVRSASQAKKLSSSSSAMISNIV---KEEKAKQSEESLRKVMYLSCWGPN 88          
BLAST of GT626125 vs. TrEMBL
Match: D7TD05_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_57.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029998001 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.563e-11
Identity = 35/72 (48.61%), Postives = 41/72 (56.94%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQG CRWN+TL+S+  H K N+                        + + AKQSEESLRTVMYLSCWGPN
Sbjct:   12 LKDQGFCRWNYTLRSIHQHAKTNLRSFAQAKKLSSSSSAMVSSRV---REEKAKQSEESLRTVMYLSCWGPN 80          
BLAST of GT626125 vs. TrEMBL
Match: B9SIF5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1255910 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.016e-10
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 2
Query:   86 LKDQGICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQG+CRWN+ L+SLQ+H KN++                        + +  K+SEESLRTVMYLSCWGPN
Sbjct:   20 LKDQGLCRWNYALRSLQHHAKNSIRSYSQHPKMLSSLSSSAVSQKL--KDEKLKKSEESLRTVMYLSCWGPN 89          
BLAST of GT626125 vs. TAIR peptide
Match: AT4G10270.1 (| Symbols: | Wound-responsive family protein | chr4:6374805-6375077 FORWARD LENGTH=90)

HSP 1 Score: 64.6994 bits (156), Expect = 3.518e-11
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 2
Query:   86 LKDQ-GICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQ G+CRWN+ L+S+  H++NNV                        + + AK++EESLRTVMYLSCWGPN
Sbjct:   20 LKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAAVTSSG--ESEKAKKAEESLRTVMYLSCWGPN 90          
BLAST of GT626125 vs. TAIR peptide
Match: AT4G10265.1 (| Symbols: | Wound-responsive family protein | chr4:6373226-6373477 REVERSE LENGTH=83)

HSP 1 Score: 56.6102 bits (135), Expect = 9.580e-9
Identity = 29/73 (39.73%), Postives = 39/73 (53.42%), Query Frame = 2
Query:   86 LKDQ-GICRWNHTLKSLQNHVKNNVXXXXXXXXXXXXXXXXXXXXXXXRQRQNAKQSEESLRTVMYLSCWGPN 301
            LKDQ G+CRWN+ ++S   +++NN+                             KQ+EESLRTVMYLSCWGP+
Sbjct:   20 LKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDYT---------NKTKQAEESLRTVMYLSCWGPS 83          
The following BLAST results are available for this feature:
BLAST of GT626125 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TCQ6_SOYBN4.127e-1251.39Putative uncharacterized protein OS=Glycine max PE... [more]
C6T005_SOYBN4.127e-1251.39Putative uncharacterized protein OS=Glycine max PE... [more]
C6SWS5_SOYBN5.390e-1251.39Putative uncharacterized protein OS=Glycine max PE... [more]
B9SIF6_RICCO9.194e-1245.83Putative uncharacterized protein OS=Ricinus commun... [more]
Q9SBR5_MEDVA1.568e-1150.68Putative wound-induced protein OS=Medicago varia G... [more]
B9SIF3_RICCO2.675e-1147.22Putative uncharacterized protein OS=Ricinus commun... [more]
A9PDX5_POPTR2.675e-1150.70Putative uncharacterized protein OS=Populus tricho... [more]
B9INV4_POPTR3.494e-1150.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TD05_VITVI4.563e-1148.61Whole genome shotgun sequence of line PN40024, sca... [more]
B9SIF5_RICCO1.016e-1047.22Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of GT626125 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G10270.13.518e-1145.21| Symbols: | Wound-responsive family protein | ch... [more]
AT4G10265.19.580e-939.73| Symbols: | Wound-responsive family protein | ch... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 19..99
score: 3
NoneNo IPR availableSEGsegsegcoord: 11..28
score: NAcoord: 53..75
score
NoneNo IPR availableSEGsegsegcoord: 36..46
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT626125 ID=GT626125; Name=GT626125; organism=Lens culinaris; type=EST; length=538bp
TAGAGTTCAAGAATCATTAATACAGAAGATGAGTTCAACAAGCAGAGCAT
GGGCGGCAGCAGCGAGTGTTGCAGTCGTGGAAGCATTGAAGGATCAAGGT
ATATGCAGATGGAATCATACACTTAAGTCACTTCAAAATCATGTCAAAAA
CAATGTCAGATCATTTTCTCAAGCAAAGAAACTTTCATCCTCCACTTCTT
CTCCTTCTATGGTTTCTAATTCTCATAGACAAAGACAGAATGCAAAGCAA
TCAGAGGAATCTTTGAGGACAGTCATGTACTTGAGTTGTTGGGGTCCCAA
TAATTAGAGGAGATTGTATGGAACAAGTTTTTAACGCAATTATTGGATAC
TTCTTCATTGGGATCCACTCACAACAATGAAGGGTTCCAATAAGGGTAGC
TCTAAATTAGAGGTGTTAGGTCCTAGATCTTTCTCTTCTAAAGAAAAGTT
TGGCCTCTCTTCATGTATTGCTAACATTAAAAGAGATGTATGTAAATCAT
GACGAATATATCAAGAAAGAACATATGACTTCCACTTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR022251DUF3774_wound-induced