GT628027

EST Overview


Name	GT628027
Unique Name	GT628027
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	605

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT628027 vs. TrEMBL
Match: D6C528_ARAHY (Leafy cotyledon 1-A OS=Arachis hypogaea GN=LEC1-A PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.098e-34
Identity = 75/87 (86.21%), Postives = 76/87 (87.36%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQYG-------GGFVPQFHIGH 241
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMR EPLGKRT+D YG         FVPQFHIGH
Sbjct:   97 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTVD-YGTLGVAATSAFVPQFHIGH 182

[Close]

BLAST of GT628027 vs. TrEMBL
Match: D6C529_ARAHY (Leafy cotyledon 1-B OS=Arachis hypogaea GN=LEC1-B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.623e-33
Identity = 74/87 (85.06%), Postives = 75/87 (86.21%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQYG-------GGFVPQFHIGH 241
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMR EPLGKRT+D YG         FVP FHIGH
Sbjct:   96 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTVD-YGTLGVAAASTFVPPFHIGH 181

[Close]

BLAST of GT628027 vs. TrEMBL
Match: A3KLH9_THECC (Leafy cotyledon1-like protein OS=Theobroma cacao GN=lec1-l PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.031e-29
Identity = 66/84 (78.57%), Postives = 71/84 (84.52%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQYG----GGFVPQFHIGH 241
            ITGEANERCQREQRKT TAEDVLWAMSKLGFDDYIEPLT+YLHRYRELEG+R S+R EPLGKR +D YG      F P FH+GH
Sbjct:   93 ITGEANERCQREQRKTTTAEDVLWAMSKLGFDDYIEPLTVYLHRYRELEGERGSIRGEPLGKRAVD-YGALSVAAFAPAFHMGH 175

[Close]

BLAST of GT628027 vs. TrEMBL
Match: C6SYP5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.347e-29
Identity = 68/80 (85.00%), Postives = 70/80 (87.50%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMD--QYGGGFV-PQFH 232
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMR EPLGKRT++       FV P FH
Sbjct:  101 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTVEYATLATAFVPPPFH 180

[Close]

BLAST of GT628027 vs. TrEMBL
Match: B5KMS8_SOYBN (Transcription factor LEC1-A OS=Glycine max GN=LEC1-A PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.347e-29
Identity = 68/80 (85.00%), Postives = 70/80 (87.50%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMD--QYGGGFV-PQFH 232
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMR EPLGKRT++       FV P FH
Sbjct:  101 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTVEYATLATAFVPPPFH 180

[Close]

BLAST of GT628027 vs. TrEMBL
Match: C6T0M9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.759e-29
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMD 199
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMR EPLGKRT++
Sbjct:   94 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTVE 159

[Close]

BLAST of GT628027 vs. TrEMBL
Match: B5KMT1_9FABA (Transcription factor LEC1-B OS=Glycine latifolia GN=LEC1-B PE=4 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.759e-29
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMD 199
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMR EPLGKRT++
Sbjct:  101 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTVE 166

[Close]

BLAST of GT628027 vs. TrEMBL
Match: B5KMS9_SOYBN (Transcription factor LEC1-B OS=Glycine max GN=LEC1-B PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.759e-29
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMD 199
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMR EPLGKRT++
Sbjct:   94 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTVE 159

[Close]

BLAST of GT628027 vs. TrEMBL
Match: D7SZ49_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_956.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00002895001 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.001e-29
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQYGG----GFVPQFHIGH 241
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDY+EPLTMYLHRYRELEGDR ++R EP+ KR + ++GG     F P FH+GH
Sbjct:   92 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYMEPLTMYLHRYRELEGDRATIRSEPVVKRNV-EFGGLSVAAFAPAFHMGH 174

[Close]

BLAST of GT628027 vs. TrEMBL
Match: Q8LJQ5_PHACN (LEC1-like protein OS=Phaseolus coccineus PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.731e-29
Identity = 68/84 (80.95%), Postives = 71/84 (84.52%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQYGGG------FV-PQFH 232
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDY+EPLTMYLHRYRELEGDRTSMR E LGKRT++    G      FV PQFH
Sbjct:   97 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYMEPLTMYLHRYRELEGDRTSMRGESLGKRTIEYAPMGVGVATAFVPPQFH 180

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.907e-24
Identity = 62/90 (68.89%), Postives = 67/90 (74.44%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR--------TSMRVEPLGKR---TMDQYGG-GFVPQFHI 235
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLT+YLHRYRELEG+R         SM    + KR   TM +YG  G VP  H+
Sbjct:  101 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVKRPNGTMTEYGAYGPVPGIHM 190

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB9_ARATH (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana GN=NFYB9 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.281e-21
Identity = 48/71 (67.61%), Postives = 61/71 (85.92%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR-TSMRVEPLGKRTMDQYGG 211
            +TGEANERCQREQRKTITAED+LWAMSKLGFD+Y++PLT++++RYRE+E DR +++R EP   R    YGG
Sbjct:   72 VTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLR--QTYGG 140

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.542e-17
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQ-----------YGGGFVPQFHIGH 241
            +TGEA+++CQ+E+RKTI  +D+LWAM+ LGF+DY+EPL +YL R+RE+EG+RT +     G    +            YGGG   Q+H  H
Sbjct:   70 VTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGRPQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHH 160

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.031e-16
Identity = 39/71 (54.93%), Postives = 55/71 (77.46%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQYGGG 214
            ITGEA+++CQRE+RKTI  +D+LWAM+ LGF+DY+EPL +YL +YRE+EG++T+        R  D+ GGG
Sbjct:   64 ITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTT-----TAGRQGDKEGGG 129

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.488e-15
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD---------------------RTSMRVEPLGKRTMDQYGGGFV-PQFHIG 238
            IT EA+++CQRE+RKTI  +D+LWAM+ LGF+DYIEPL +YL +YRE+EGD                      +S   E +G++     G G++ PQ+H G
Sbjct:   74 ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKDALGHVGASSSAAEGMGQQGAYNQGMGYMQPQYHNG 174

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.944e-15
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR---------------------TSMRVEPLGKRTMDQYGGGFV-PQFHIG 238
            IT EA+++CQRE+RKTI  +D+LWAM+ LGF+DYIEPL +YL +YRE+EGD                      +S   + +G++     G G++ PQ+H G
Sbjct:   81 ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQYHNG 181

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYBA_ARATH (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana GN=NFYB10 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.386e-15
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            +T EA+++CQRE+RKTI  +D+LWAM+ LGF+DYI+PL +YL RYRE+EGD
Sbjct:   72 VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGD 122

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB8_ARATH (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana GN=NFYB8 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.386e-15
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            +T EA+++CQRE+RKTI  +D+LWAM+ LGF+DY+EPL +YL RYRE+EGD
Sbjct:   73 VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD 123

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB1_ARATH (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.386e-15
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            IT EA+++CQ+E+RKT+  +D+LWAM+ LGF+DY+EPL +YL RYRELEGD
Sbjct:   64 ITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD 114

[Close]

BLAST of GT628027 vs. SwissProt
Match: NFYB7_ARATH (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.376e-13
Identity = 28/54 (51.85%), Postives = 46/54 (85.19%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTS 163
            +TGEA+++CQRE+RKTI  +D++WA++ LGF+DY+ PL +YL +YR+ EG++ +
Sbjct:   79 VTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVN 132

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT5G47670.2 (| Symbols: NF-YB6, L1L | nuclear factor Y, subunit B6 | chr5:19315358-19315975 FORWARD LENGTH=205)

HSP 1 Score: 111.309 bits (277), Expect = 4.074e-25
Identity = 62/90 (68.89%), Postives = 67/90 (74.44%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR--------TSMRVEPLGKR---TMDQYGG-GFVPQFHI 235
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLT+YLHRYRELEG+R         SM    + KR   TM +YG  G VP  H+
Sbjct:   72 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVKRPNGTMTEYGAYGPVPGIHM 161

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT5G47670.1 (| Symbols: NF-YB6, L1L | nuclear factor Y, subunit B6 | chr5:19315061-19315975 FORWARD LENGTH=234)

HSP 1 Score: 111.309 bits (277), Expect = 4.074e-25
Identity = 62/90 (68.89%), Postives = 67/90 (74.44%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR--------TSMRVEPLGKR---TMDQYGG-GFVPQFHI 235
            ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLT+YLHRYRELEG+R         SM    + KR   TM +YG  G VP  H+
Sbjct:  101 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVKRPNGTMTEYGAYGPVPGIHM 190

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT1G21970.1 (| Symbols: LEC1, EMB 212, EMB212, NF-YB9 | Histone superfamily protein | chr1:7727750-7729571 REVERSE LENGTH=238)

HSP 1 Score: 100.908 bits (250), Expect = 5.506e-22
Identity = 48/71 (67.61%), Postives = 61/71 (85.92%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR-TSMRVEPLGKRTMDQYGG 211
            +TGEANERCQREQRKTITAED+LWAMSKLGFD+Y++PLT++++RYRE+E DR +++R EP   R    YGG
Sbjct:  102 VTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLR--QTYGG 170

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT5G47640.1 (| Symbols: NF-YB2 | nuclear factor Y, subunit B2 | chr5:19309414-19309986 FORWARD LENGTH=190)

HSP 1 Score: 88.1965 bits (217), Expect = 3.693e-18
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQ-----------YGGGFVPQFHIGH 241
            +TGEA+++CQ+E+RKTI  +D+LWAM+ LGF+DY+EPL +YL R+RE+EG+RT +     G    +            YGGG   Q+H  H
Sbjct:   70 VTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGRPQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHH 160

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT4G14540.1 (| Symbols: NF-YB3 | nuclear factor Y, subunit B3 | chr4:8344663-8345148 FORWARD LENGTH=161)

HSP 1 Score: 86.6557 bits (213), Expect = 1.075e-17
Identity = 39/71 (54.93%), Postives = 55/71 (77.46%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRVEPLGKRTMDQYGGG 214
            ITGEA+++CQRE+RKTI  +D+LWAM+ LGF+DY+EPL +YL +YRE+EG++T+        R  D+ GGG
Sbjct:   64 ITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTT-----TAGRQGDKEGGG 129

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT3G53340.1 (| Symbols: NF-YB10 | nuclear factor Y, subunit B10 | chr3:19774667-19775991 REVERSE LENGTH=176)

HSP 1 Score: 80.4925 bits (197), Expect = 7.701e-16
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            +T EA+++CQRE+RKTI  +D+LWAM+ LGF+DYI+PL +YL RYRE+EGD
Sbjct:   72 VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGD 122

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT2G38880.5 (| Symbols: NF-YB1 | nuclear factor Y, subunit B1 | chr2:16238685-16240316 FORWARD LENGTH=141)

HSP 1 Score: 80.4925 bits (197), Expect = 7.701e-16
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            IT EA+++CQ+E+RKT+  +D+LWAM+ LGF+DY+EPL +YL RYRELEGD
Sbjct:   64 ITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD 114

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT2G37060.3 (| Symbols: NF-YB8 | nuclear factor Y, subunit B8 | chr2:15576336-15577660 FORWARD LENGTH=173)

HSP 1 Score: 80.4925 bits (197), Expect = 7.701e-16
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            +T EA+++CQRE+RKTI  +D+LWAM+ LGF+DY+EPL +YL RYRE+EGD
Sbjct:   73 VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD 123

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT2G38880.1 (| Symbols: ATNF-YB1, HAP3, ATHAP3, HAP3A, NF-YB1 | nuclear factor Y, subunit B1 | chr2:16238685-16240316 FORWARD LENGTH=141)

HSP 1 Score: 80.4925 bits (197), Expect = 7.701e-16
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            IT EA+++CQ+E+RKT+  +D+LWAM+ LGF+DY+EPL +YL RYRELEGD
Sbjct:   64 ITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD 114

[Close]

BLAST of GT628027 vs. TAIR peptide
Match: AT2G37060.2 (| Symbols: NF-YB8 | nuclear factor Y, subunit B8 | chr2:15576336-15577660 FORWARD LENGTH=173)

HSP 1 Score: 80.4925 bits (197), Expect = 7.701e-16
Identity = 33/51 (64.71%), Postives = 45/51 (88.24%), Query Frame = 2

Query:    2 ITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD 154
            +T EA+++CQRE+RKTI  +D+LWAM+ LGF+DY+EPL +YL RYRE+EGD
Sbjct:   73 VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD 123

The following BLAST results are available for this feature:

BLAST of GT628027 vs. TrEMBL
BLAST of GT628027 vs. SwissProt
BLAST of GT628027 vs. TAIR peptide

BLAST of GT628027 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D6C528_ARAHY	3.098e-34	86.21	Leafy cotyledon 1-A OS=Arachis hypogaea GN=LEC1-A ...	[more]
D6C529_ARAHY	2.623e-33	85.06	Leafy cotyledon 1-B OS=Arachis hypogaea GN=LEC1-B ...	[more]
A3KLH9_THECC	1.031e-29	78.57	Leafy cotyledon1-like protein OS=Theobroma cacao G...	[more]
C6SYP5_SOYBN	1.347e-29	85.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
B5KMS8_SOYBN	1.347e-29	85.00	Transcription factor LEC1-A OS=Glycine max GN=LEC1...	[more]
C6T0M9_SOYBN	1.759e-29	95.45	Putative uncharacterized protein OS=Glycine max PE...	[more]
B5KMT1_9FABA	1.759e-29	95.45	Transcription factor LEC1-B OS=Glycine latifolia G...	[more]
B5KMS9_SOYBN	1.759e-29	95.45	Transcription factor LEC1-B OS=Glycine max GN=LEC1...	[more]
D7SZ49_VITVI	3.001e-29	76.19	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q8LJQ5_PHACN	8.731e-29	80.95	LEC1-like protein OS=Phaseolus coccineus PE=2 SV=1	[more]

BLAST of GT628027 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
NFYB6_ARATH	3.907e-24	68.89	Nuclear transcription factor Y subunit B-6 OS=Arab...	[more]
NFYB9_ARATH	5.281e-21	67.61	Nuclear transcription factor Y subunit B-9 OS=Arab...	[more]
NFYB2_ARATH	3.542e-17	45.05	Nuclear transcription factor Y subunit B-2 OS=Arab...	[more]
NFYB3_ARATH	1.031e-16	54.93	Nuclear transcription factor Y subunit B-3 OS=Arab...	[more]
NFYB_MAIZE	1.488e-15	42.57	Nuclear transcription factor Y subunit B OS=Zea ma...	[more]
NFYB3_ORYSJ	1.944e-15	41.58	Nuclear transcription factor Y subunit B-3 OS=Oryz...	[more]
NFYBA_ARATH	7.386e-15	64.71	Nuclear transcription factor Y subunit B-10 OS=Ara...	[more]
NFYB8_ARATH	7.386e-15	64.71	Nuclear transcription factor Y subunit B-8 OS=Arab...	[more]
NFYB1_ARATH	7.386e-15	64.71	Nuclear transcription factor Y subunit B-1 OS=Arab...	[more]
NFYB7_ARATH	2.376e-13	51.85	Nuclear transcription factor Y subunit B-7 OS=Arab...	[more]

BLAST of GT628027 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G47670.2	4.074e-25	68.89	\| Symbols: NF-YB6, L1L \| nuclear factor Y, subunit...	[more]
AT5G47670.1	4.074e-25	68.89	\| Symbols: NF-YB6, L1L \| nuclear factor Y, subunit...	[more]
AT1G21970.1	5.506e-22	67.61	\| Symbols: LEC1, EMB 212, EMB212, NF-YB9 \| Histone...	[more]
AT5G47640.1	3.693e-18	45.05	\| Symbols: NF-YB2 \| nuclear factor Y, subunit B2 \|...	[more]
AT4G14540.1	1.075e-17	54.93	\| Symbols: NF-YB3 \| nuclear factor Y, subunit B3 \|...	[more]
AT3G53340.1	7.701e-16	64.71	\| Symbols: NF-YB10 \| nuclear factor Y, subunit B10...	[more]
AT2G38880.5	7.701e-16	64.71	\| Symbols: NF-YB1 \| nuclear factor Y, subunit B1 \|...	[more]
AT2G37060.3	7.701e-16	64.71	\| Symbols: NF-YB8 \| nuclear factor Y, subunit B8 \|...	[more]
AT2G38880.1	7.701e-16	64.71	\| Symbols: ATNF-YB1, HAP3, ATHAP3, HAP3A, NF-YB1 \|...	[more]
AT2G37060.2	7.701e-16	64.71	\| Symbols: NF-YB8 \| nuclear factor Y, subunit B8 \|...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003957	Transcription factor, CBFA/NFYB, DNA topoisomerase	PRINTS	PR00615	CCAATSUBUNTA	coord: 9..27 score: 4.6e-08coord: 28..46 score: 4.6
IPR003957	Transcription factor, CBFA/NFYB, DNA topoisomerase	PANTHER	PTHR11064:SF9	CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A	coord: 1..53 score: 1.8
IPR003958	Transcription factor CBF/NF-Y/archaeal histone	PFAM	PF00808	CBFD_NFYB_HMF	coord: 1..26 score: 1.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	no description	coord: 1..56 score: 3.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 1..55 score: 3.3
None	No IPR available	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..53 score: 1.8
None	No IPR available	SEG	seg	seg	coord: 81..90 score: NAcoord: 108..130 score
None	No IPR available	SEG	seg	seg	coord: 30..42 score
None	No IPR available	SEG	seg	seg	coord: 4..26 score: NAcoord: 46..59 score
None	No IPR available	SEG	seg	seg	coord: 17..28 score: NAcoord: 34..45 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT628027 ID=GT628027; Name=GT628027; organism=Lens culinaris; type=EST; length=605bp
CATAACTGGTGAAGCAAATGAACGTTGTCAGAGAGAGCAAAGGAAGACAA
TAACTGCTGAAGATGTTCTTTGGGCTATGAGTAAGCTAGGGTTTGATGAT
TACATTGAACCTCTTACTATGTATCTTCATCGTTACCGTGAGCTTGAAGG
TGATCGTACTTCAATGAGAGTTGAACCATTGGGAAAGAGAACAATGGATC
AATATGGAGGTGGATTTGTGCCACAGTTTCATATTGGTCATCCAAACGGA
GGCTATTATGGGAATCCACCAACTTATATGATGAGGGATGGTGGTAGTAG
TAACAATGCACCAAATGTTGTTGGAGGTTCTTCTCATTCTCAAGGTGGAC
ATGGAAATGCTGATGCCAATGGACATCATCATCACCATCATCAATACAAA
TGATGATGATGAGAGTGTTATATCCTACAACTATAAGACTTAGTAGTTTA
ACTATGAGTAGTTGTTTTGTTTGATTTGATTTGGTTATGAACAACAAAGG
AAAAGCTAGTTAGAGAACTTCAATCCTATGTAGTACTCAAAATTGATAAC
TTGATTTGCTTATCTTTAAAGCTTGGTATTAATTTGGACCGGCTTCTATT
TTATC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **INTERPRO**
Term	Definition
IPR003957	Transcription factor, CBFA/NFYB, DNA topoisomerase
IPR003958	CBFA_NFYB_domain
IPR009072	Histone-fold

Search form