GT618951

EST Overview
NameGT618951
Unique NameGT618951
TypeEST
OrganismLens culinaris (lentil)
Sequence length724
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology
BLAST of GT618951 vs. TrEMBL
Match: A5AQH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009583 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.519e-34
Identity = 93/302 (30.79%), Postives = 146/302 (48.34%), Query Frame = 3
Query:    6 RQHMVPVENWAKEDMVVNKPVN-EIPLFGGTSVETSESMVQESSTEYTNELASTISKADAVENWIAQDPLKHIDGRMDHLKISNPETLVNKDNFDYNT---------QHAIEK---QDLVLDNNTGRSKLIADGNQIKMMGNLPNSKVEISYGNNSRQVEYNEGAHPPVWGIPGVNPQSKNGVHQKDEAVLS--------------------------------------------------SISQSVGFGHVQDSSNSLFSNQDPWNL-HGTYFPPPRPDKVTSKKESYSFIDQFGENSVN 719
            +Q+ VP +   K D +VN+P+N ++PLFGG  ++TSE +VQES  +Y+ +L   + K D  E+ I+ D ++ ID RM++L++   E  VN +    +          +H +++   ++++LD+   ++K++ + N  K    LP S  E+ Y +N   VE  E    P+ G       SK G+H      +S                                                   +S S   G VQDSSNSLFS+QDPWNL H  +FPPPRP+K+T K E++S  + FGEN  +
Sbjct:  711 QQYAVPTQYQVKPDTLVNRPINSDVPLFGGVPLQTSERLVQESPRDYSGKLPGVVPKEDTAESCISFDHIRPIDERMENLRVGPAENFVNSEQSKSSADKPRKEDILEHRLQQIAGKEVLLDSTFSKAKIVVESNHNKATEVLPCSAAEVPYLHNVWPVETYEVTKLPILGTLATYTHSKTGIHNVTSGEVSYGSPAFSDVESAYLTDKAPPISEWNDDTSQFQPKMVPTDIRXVSSNGNTPYLSPSNRIGDVQDSSNSLFSSQDPWNLRHDIHFPPPRPNKITIKNEAFSIREPFGENGTS 1012          
BLAST of GT618951 vs. TrEMBL
Match: B9HAE1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_762858 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.113e-31
Identity = 99/300 (33.00%), Postives = 146/300 (48.67%), Query Frame = 3
Query:    6 RQHMVPVENWAKEDMVVNKPVN-EIPLFGGTSVETSESMVQESSTEYTNELASTISKADAVENWIAQDPLKHIDGRMDHLKISNPETLVNKDN-------------FDYNTQHAIEKQDLVLDNNTGRSKLIADGNQIKMMGNLPNSKVEISYGNNSRQVEYNEGAHPPV-----------------------WGIPG--------VNPQSKNGVHQKDEA-------------------VLSSISQSVGFGHVQDSSNSLFSNQDPWN-LHGTYFPPPRPDKVTSKKESYSFIDQFGEN 710
            +QH VP++      ++++KP N ++    G  ++ SE +V ES  EYT +L   +SK  AV+++I+ D L+ +DG MD L    PE  VN D               D+ TQ  I  ++++LDN   + +++ + N IK    LP S   +SY + SR +E +E A PP+                       +GIP         VN +    V  K+++                    LSS+S S G G+ QDSSNSLFS+QDPWN  H  +FPPPRP K+ +KKE +   D F EN
Sbjct:  760 QQHSVPMQ----PQILLSKPANTDVSHAAGVPIQASEQLVHESPKEYTGKLPGVVSKEYAVDSYISYDQLRLVDGMMDALHTRPPEINVNNDQKKSLVDKFRKEEILDHKTQ-KIAGREVLLDNTLSKPQVVPNSNHIKQFKVLPAS-TGVSYMHISRPMELHEVAQPPIVVNKASHPQFKIEIPALDSAEVSYGIPAFSGVESVYVNDRIPPVVEWKNDSQLHSKVVPSDVEALSSTGNTLSSLSPSSGVGNAQDSSNSLFSSQDPWNSRHDNHFPPPRPSKIATKKEVFGTRDPFIEN 1053          
BLAST of GT618951 vs. TrEMBL
Match: B9SC34_RICCO (Serine/threonine protein kinase, putative OS=Ricinus communis GN=RCOM_0702510 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.209e-28
Identity = 91/300 (30.33%), Postives = 136/300 (45.33%), Query Frame = 3
Query:    6 RQHMVPVENWAKEDMVVNKPVNEIPLFGGTSVETSESMVQESSTEYTNELASTISKADAVENWIAQDPLKHIDGRMDHLKISNPETLVNKDN-------------FDYNTQHAIEKQDLVLDNNTGRSKLIADGNQIKMMGNLPNSKVEISYGNNSRQVEYNEGAHPPVWGIPGVNPQSKNGVHQKD------------------------------------------------EAVLSSISQSVGFGHVQDSSNSLFSNQDPWNL-HGTYFPPPRPDKVTSKKESYSFIDQFGENSVN 719
            +QH+VP +    E+ +    + + P F G  ++ SE++  E   EY+ +L   + K D V++ ++ D L+ IDG M+ L++   E + N +               D+  Q  I  +D++LD    + +++ D N +K    LP S +E SY  N+R ++  E    P+ G  G  PQSK GVH  D                                                  V SS++ S   G +QDSSNSLFSNQDPW L H  + PPPRP K+ +KKE+Y   D F EN  N
Sbjct:  762 QQHVVPGQCHFNEEALHKHNIGDFPHFPGV-IQASENLGHELPLEYSGKLPHVVPKEDVVDSCVSYDQLRPIDGMMETLRMCPTEIIANNEQSKSPADKLRKEEILDHRAQQ-IAGRDVLLDTTYNKPQVLIDSNHVKQTEVLPTS-IEGSYVYNTRLMDSYEVTQLPISGNQGSYPQSKIGVHLLDSDEFSYGNPAPSGFEPGYALDRIPPVVGWKNDASRLQPNIGLPEMEAASNVPSSVASSGRLGDIQDSSNSLFSNQDPWTLRHDAHLPPPRPSKILTKKEAYGTKDLFCENQSN 1058          
BLAST of GT618951 vs. TrEMBL
Match: D7T516_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_118.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012895001 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.458e-12
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 3
Query:  546 ISQSVGFGHVQDSSNSLFSNQDPWNL-HGTYFPPPRPDKVTSKKESYSFIDQFGENSVN 719
            +S S   G VQDSSNSLFS+QDPWNL H  +FPPPRP+K+T K E++S  + FGEN  +
Sbjct:   18 LSPSNRIGDVQDSSNSLFSSQDPWNLRHDIHFPPPRPNKITIKNEAFSIREPFGENGTS 76          
The following BLAST results are available for this feature:
BLAST of GT618951 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
A5AQH5_VITVI3.519e-3430.79Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HAE1_POPTR8.113e-3133.00Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9SC34_RICCO2.209e-2830.33Serine/threonine protein kinase, putative OS=Ricin... [more]
D7T516_VITVI6.458e-1259.32Whole genome shotgun sequence of line PN40024, sca... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT618951 ID=GT618951; Name=GT618951; organism=Lens culinaris; type=EST; length=724bp
TTGGCCGCCAGCACATGGTGCCAGTTGAAAACTGGGCCAAAGAGGACATG
GTTGTGAATAAGCCTGTTAACGAAATACCTTTATTTGGTGGCACATCTGT
CGAAACTTCTGAGAGTATGGTTCAAGAATCATCAACAGAATATACTAATG
AGCTTGCTAGTACAATTTCAAAAGCAGATGCTGTGGAGAATTGGATTGCA
CAGGACCCGCTCAAACACATTGATGGAAGAATGGACCACCTCAAGATAAG
CAACCCTGAAACTTTGGTAAATAAAGATAATTTTGATTACAATACTCAGC
ATGCTATAGAGAAGCAAGATTTGGTTTTGGATAACAACACTGGCAGGTCA
AAATTGATTGCTGATGGAAATCAAATTAAGATGATGGGTAATCTTCCTAA
CTCCAAAGTAGAAATTTCATATGGTAATAATTCTAGGCAAGTGGAGTACA
ATGAGGGCGCACACCCGCCCGTTTGGGGCATTCCCGGAGTAAATCCTCAA
TCTAAGAATGGTGTCCATCAGAAGGATGAAGCAGTTTTATCTTCAATTTC
GCAATCTGTTGGGTTTGGACACGTGCAGGATTCTTCAAACTCACTTTTTA
GCAATCAGGATCCCTGGAATCTACACGGCACCTACTTTCCACCACCCAGA
CCTGACAAAGTCACATCAAAAAAAGAAAGTTATTCTTTTATTGACCAGTT
TGGTGAGAATTCAGTCAACGGCGG
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