GT619112

EST Overview
NameGT619112
Unique NameGT619112
TypeEST
OrganismLens culinaris (lentil)
Sequence length645
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT619112 vs. TrEMBL
Match: C6SV71_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.851e-30
Identity = 84/158 (53.16%), Postives = 99/158 (62.66%), Query Frame = 3
Query:   45 FCTFPCHPR---LKALSIKKNRCLLVTKAVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAVAVA 509
            FC+FP   R   LKA +I   +   V KAVE+                              P+SPSDTLTM FQA+G ++ETAIP LTKALE  +GV +LK  + EGLA LEL+KQTT+QATGVASGL+ETIQG GFKLQTLNLSF+D   E VAVA
Sbjct:   34 FCSFPLRSRISSLKAQTILLQKMKRVVKAVEEETQQELTAVDESEQPSTSEAPPVVV-----PVSPSDTLTMFFQAEGTVSETAIPALTKALEETDGVTDLKFQLAEGLAILELKKQTTVQATGVASGLLETIQGSGFKLQTLNLSFED---EEVAVA 183          
BLAST of GT619112 vs. TrEMBL
Match: D7M6P1_ARALY (Heavy-metal-associated domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488333 PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.123e-30
Identity = 68/93 (73.12%), Postives = 77/93 (82.80%), Query Frame = 3
Query:  222 PISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAV 500
            P+SPSD LTM FQADG LNE AIP +T+AL+ I+GV NLKV V EG+A +EL KQTT+QATGVAS LVETIQG GFKLQTLNLSF+D DE  V
Sbjct:   86 PVSPSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVELSKQTTVQATGVASSLVETIQGAGFKLQTLNLSFEDEDEVLV 178          
BLAST of GT619112 vs. TrEMBL
Match: Q93VK7_ARATH (AT5g14910/F2G14_30 OS=Arabidopsis thaliana GN=At5g14910 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.384e-30
Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 3
Query:  222 PISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAV 500
            P+SPSD LTM FQADG LNE AIP +T+AL+ I+GV NLKV V EG+A +EL KQTT+QATGVAS LVETIQG GFKLQTLNLSF+D+DE  V
Sbjct:   86 PVSPSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVELLKQTTVQATGVASNLVETIQGAGFKLQTLNLSFEDDDEVLV 178          
BLAST of GT619112 vs. TrEMBL
Match: C6T1N2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.015e-28
Identity = 79/149 (53.02%), Postives = 92/149 (61.74%), Query Frame = 3
Query:   45 FCTFPCHPRLKALSI----KKNRCLLVTKAVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFD 479
            FC+FP      +L +    KK R   V KAVE+                              P+SPSDTLTM FQA+G ++ETAIP LTKALE  EGV +LKV + EGLA LEL+KQTT+QATGVAS LVETIQG GFKLQTLNLSF+
Sbjct:   38 FCSFPLRSATSSLKVQTIQKKKR---VVKAVEEDTQQELNAADDSEQPSTSEAPPVVV-----PVSPSDTLTMFFQAEGTVSETAIPALTKALEETEGVTDLKVQLAEGLAILELKKQTTVQATGVASSLVETIQGSGFKLQTLNLSFE 178          
BLAST of GT619112 vs. TrEMBL
Match: B9RUE7_RICCO (Metal ion binding protein, putative OS=Ricinus communis GN=RCOM_0852200 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.859e-28
Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 3
Query:  222 PISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDE 491
            P+SPSDTLTM FQA+G +NETAIP +TKALE  EG+ +LKV V EG+A++EL KQTT QATGVAS LVE IQG GFKLQTLNLSF D ++
Sbjct:   91 PVSPSDTLTMFFQAEGTMNETAIPTVTKALEGSEGITDLKVQVQEGIASVELTKQTTAQATGVASSLVELIQGSGFKLQTLNLSFADEED 180          
BLAST of GT619112 vs. TrEMBL
Match: Q9LFR4_ARATH (Putative uncharacterized protein F2G14_30 OS=Arabidopsis thaliana GN=F2G14_30 PE=4 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.466e-27
Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 3
Query:  222 PISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAV 500
            P+SPSD LTM FQADG LNE AIP +T+AL+ I+GV NLKV V EG+A +E   QTT+QATGVAS LVETIQG GFKLQTLNLSF+D+DE  V
Sbjct:   86 PVSPSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVE---QTTVQATGVASNLVETIQGAGFKLQTLNLSFEDDDEVLV 175          
BLAST of GT619112 vs. TrEMBL
Match: B9GHP5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_549486 PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.915e-27
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 3
Query:  222 PISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAV 500
            P+SPSDTLTM FQA+G +NETAIP +T ALE  EGV +LKV V EG+A++EL KQTT+QATGVAS LVE +Q  GFKLQTLNLSF D ++  V
Sbjct:   92 PVSPSDTLTMYFQAEGTMNETAIPKVTNALEGTEGVTDLKVRVLEGIASVELTKQTTVQATGVASSLVELVQSSGFKLQTLNLSFQDVEDALV 184          
BLAST of GT619112 vs. TrEMBL
Match: D7TWU3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032527001 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.835e-24
Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 3
Query:  249 MLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDE 491
            M FQA+G +NETAIP +TKALE  EG+  LKV V EG+A++ L KQTT+QATGVAS LVETIQG GFKLQTLNLSF+D ++
Sbjct:    1 MFFQAEGTMNETAIPTVTKALEETEGITTLKVQVVEGIASVALTKQTTVQATGVASSLVETIQGSGFKLQTLNLSFEDEED 81          
BLAST of GT619112 vs. TrEMBL
Match: B6TI14_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.087e-22
Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 3
Query:  222 PISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAVAVA*TKSTS 527
            P   SD+L + F+A+G + E AIP +T++LE +EGVK+L+V + EG+ ++ L K+TT+QATGVAS LVE IQG GFKLQTL+LSFDD DE A     T  +S
Sbjct:   59 PAYTSDSLILYFKAEGTMEERAIPKITESLEGMEGVKDLEVLIEEGIGSVVLTKETTVQATGVASNLVEAIQGAGFKLQTLSLSFDDFDEPAAGAGGTVQSS 160          
BLAST of GT619112 vs. TrEMBL
Match: Q5WMQ0_ORYSJ (Putative uncharacterized protein OSJNBa0053E01.2 OS=Oryza sativa subsp. japonica GN=OSJNBa0053E01.2 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.420e-22
Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 3
Query:  234 SDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAVAVA 509
            SD+L + F+A+G + E AIP +T+ALE +EGV +L+V + EG+ ++ L K+TT+QATGVAS LVE IQG GFKLQTL+LSFDD +E+A  VA
Sbjct:  387 SDSLILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNLVEAIQGAGFKLQTLSLSFDDFNEDAATVA 478          
BLAST of GT619112 vs. TAIR peptide
Match: AT5G14910.1 (| Symbols: | Heavy metal transport/detoxification superfamily protein | chr5:4823815-4825196 FORWARD LENGTH=178)

HSP 1 Score: 134.806 bits (338), Expect = 3.818e-32
Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 3
Query:  222 PISPSDTLTMLFQADGILNETAIPPLTKALEAIEGVKNLKVNVYEGLATLELQKQTTIQATGVASGLVETIQGLGFKLQTLNLSFDDNDEEAV 500
            P+SPSD LTM FQADG LNE AIP +T+AL+ I+GV NLKV V EG+A +EL KQTT+QATGVAS LVETIQG GFKLQTLNLSF+D+DE  V
Sbjct:   86 PVSPSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVELLKQTTVQATGVASNLVETIQGAGFKLQTLNLSFEDDDEVLV 178          
The following BLAST results are available for this feature:
BLAST of GT619112 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SV71_SOYBN1.851e-3053.16Putative uncharacterized protein OS=Glycine max PE... [more]
D7M6P1_ARALY4.123e-3073.12Heavy-metal-associated domain-containing protein O... [more]
Q93VK7_ARATH5.384e-3073.12AT5g14910/F2G14_30 OS=Arabidopsis thaliana GN=At5g... [more]
C6T1N2_SOYBN1.015e-2853.02Putative uncharacterized protein OS=Glycine max PE... [more]
B9RUE7_RICCO3.859e-2871.11Metal ion binding protein, putative OS=Ricinus com... [more]
Q9LFR4_ARATH1.466e-2770.97Putative uncharacterized protein F2G14_30 OS=Arabi... [more]
B9GHP5_POPTR1.915e-2767.74Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TWU3_VITVI9.835e-2469.14Whole genome shotgun sequence of line PN40024, sca... [more]
B6TI14_MAIZE1.087e-2254.90Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q5WMQ0_ORYSJ1.420e-2258.70Putative uncharacterized protein OSJNBa0053E01.2 O... [more]
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BLAST of GT619112 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G14910.13.818e-3273.12| Symbols: | Heavy metal transport/detoxification... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..24
score
NoneNo IPR availableGENE3D3.30.70.100no descriptioncoord: 100..153
score: 0.0
NoneNo IPR availableSEGsegsegcoord: 6..12
score: NAcoord: 44..73
score
NoneNo IPR availableSEGsegsegcoord: 1..11
score
NoneNo IPR availableSEGsegsegcoord: 16..29
score
IPR006121Heavy metal transport/detoxification proteinPROFILEPS50846HMA_2coord: 82..153
score: 9
IPR006121Heavy metal transport/detoxification proteinSUPERFAMILY55008HMA, heavy metal-associated domaincoord: 79..155
score: 7.7

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT619112 ID=GT619112; Name=GT619112; organism=Lens culinaris; type=EST; length=645bp
CTTCTACATTCCCTGTCTCTTCCTCTTCTTCTCAATCCCTTCAATTTTGC
ACTTTTCCATGCCACCCTCGTTTGAAGGCACTGTCAATAAAAAAGAACCG
CTGTTTACTTGTGACTAAGGCAGTGGAAGATGAAACCCAACAACAACAAG
AACCAGTTGTTACTGAGATTGAGCAACAACAACAACCATCATCAACCTCG
GAGCAACAAACAGTTGTTGTTCCCATTTCACCATCAGACACCCTCACCAT
GCTCTTTCAGGCAGATGGAATATTGAATGAAACAGCTATTCCACCATTGA
CCAAAGCTTTAGAGGCGATCGAGGGTGTTAAAAATTTGAAGGTTAATGTA
TACGAGGGACTTGCAACTCTAGAGTTGCAAAAGCAGACAACAATCCAAGC
AACAGGAGTGGCTTCTGGTCTTGTAGAAACCATACAAGGTTTAGGCTTCA
AATTACAGACATTAAATCTGAGTTTCGATGATAATGATGAAGAAGCTGTT
GCAGTTGCCTAGACAAAATCTACTAGTGTAACAATTATTAGACTGCAAAA
TTTATTTATTTATTTTGTATTTGAAGAGTGTTAACTAACTTTATGTATTA
TTATTGTTAGTATCATCATCATTATTATTGGTTTTTCTCTGCATT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom