GT627009

EST Overview
NameGT627009
Unique NameGT627009
TypeEST
OrganismLens culinaris (lentil)
Sequence length564
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT627009 vs. TrEMBL
Match: B9REW7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1429410 PE=4 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.238e-44
Identity = 81/141 (57.45%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AIY+ G G+PLF  +   TH + W LW+IH+L+L A YGFILF+  SKWRE+LP RP FY Y+V+MF  NA+                WLY  T++CYHA YLP L+ TFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  168 AIYMFGLGIPLFIDSNEQTHHMKWSLWVIHRLVLTAVYGFILFMYHSKWRERLPARPAFYKYIVIMFALNALALFACGLTGHGAGFGFWLYGITIVCYHAFYLPLLHKTFLADFFQEEDLHLENVYYSEMKDAGFFDADWE 308          
BLAST of GT627009 vs. TrEMBL
Match: B9MZL6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1112753 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.112e-44
Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            A+Y+ GFG+PLF  +   +H + W LW+IH+L+L A YG I+F+  SKWRE+LP RP FYNY+ +MFI NA+                WLY  T++CYHA YLP LYVTFLADFF+EE   L+N YYSEMKDAGFFD DW+
Sbjct:  165 AVYLFGFGIPLFIDSSDHSHRMKWSLWVIHRLVLTAVYGLIMFMYHSKWRERLPARPAFYNYIAIMFILNALALFACALTGHGAGFGYWLYGITIVCYHAFYLPLLYVTFLADFFQEEGLNLENVYYSEMKDAGFFDDDWD 305          
BLAST of GT627009 vs. TrEMBL
Match: D7TUW3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021968001 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.603e-44
Identity = 80/140 (57.14%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IY+ GFGVPLF      +H + WGLW++HKL+L A YGFILF+  SKWRE+LP RP FY Y+ +M   NA+                WLY  T++ YHA YLP LY+TFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:   88 IYLFGFGVPLFIDNNDQSHRVKWGLWVVHKLVLTAVYGFILFMYHSKWRERLPARPAFYKYITIMCCLNALALFACGLTGNGAGFGFWLYGLTMIFYHAFYLPLLYITFLADFFQEEDLHLENVYYSEMKDAGFFDADWE 227          
BLAST of GT627009 vs. TrEMBL
Match: A5BLR4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011755 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.603e-44
Identity = 80/140 (57.14%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IY+ GFGVPLF      +H + WGLW++HKL+L A YGFILF+  SKWRE+LP RP FY Y+ +M   NA+                WLY  T++ YHA YLP LY+TFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  133 IYLFGFGVPLFIDNNDQSHRVKWGLWVVHKLVLTAVYGFILFMYHSKWRERLPARPAFYKYITIMCCLNALALFACGLTGNGAGFGFWLYGLTMIFYHAFYLPLLYITFLADFFQEEDLHLENVYYSEMKDAGFFDADWE 272          
BLAST of GT627009 vs. TrEMBL
Match: Q94AH1_ARATH (Putative uncharacterized protein At3g05010 OS=Arabidopsis thaliana GN=At3g05010 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.048e-43
Identity = 83/141 (58.87%), Postives = 93/141 (65.96%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AIY+ GFGVPLF       H   WGLW+IHKLLLA  YG I F+  SKWRE+LP RP FY Y+ VM   N ++               WLY  T +CYHA YLP LYVTFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  160 AIYLFGFGVPLFIDNNEHIHKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPARPAFYKYITVMLALNGLSLFACALTANGAHFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEEDLNLENVYYSEMKDAGFFDADWE 300          
BLAST of GT627009 vs. TrEMBL
Match: B9I847_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_240991 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.335e-43
Identity = 79/141 (56.03%), Postives = 99/141 (70.21%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            A+Y+ GFG+PLF  +   +H + W LW IH+L+L A YG ILF+  SKWRE+LP RP FY Y+V+MFI NA++               WLY  T++CYHA YLP LYVTFLADFF+EED  L++ YYSEMKDAGFFD DW+
Sbjct:  141 ALYLFGFGIPLFIDSNEHSHHMKWSLWAIHRLVLTAIYGSILFMYHSKWRERLPARPAFYKYIVIMFILNALSLFASALTGHGTGFGYWLYSTTIVCYHAFYLPLLYVTFLADFFQEEDLHLESVYYSEMKDAGFFDDDWD 281          
BLAST of GT627009 vs. TrEMBL
Match: B6T9J0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.203e-43
Identity = 81/140 (57.86%), Postives = 98/140 (70.00%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IYV GFGVPLF  T   T    WGLWI+HKL+L   YG I+F+  S+WR++LP +P +YNYV VM + N I+               WLY+ T +CYH+LYLP LYVTFLADFF+EED LL+N YYSEMKDAGFFDADW+
Sbjct:  165 IYVFGFGVPLFIDTDQGTSG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPAKPAYYNYVCVMLLLNGISLFGCFLIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYYSEMKDAGFFDADWD 303          
BLAST of GT627009 vs. TrEMBL
Match: B6SL94_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.203e-43
Identity = 81/140 (57.86%), Postives = 98/140 (70.00%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IYV GFGVPLF  T   T    WGLWI+HKL+L   YG I+F+  S+WR++LP +P +YNYV VM + N I+               WLY+ T +CYH+LYLP LYVTFLADFF+EED LL+N YYSEMKDAGFFDADW+
Sbjct:  165 IYVFGFGVPLFIDTDQGTSG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPAKPAYYNYVCVMLLLNGISLFGCFVIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYYSEMKDAGFFDADWD 303          
BLAST of GT627009 vs. TrEMBL
Match: Q8L8S4_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g27210 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.812e-42
Identity = 78/141 (55.32%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AI++ GFGVPLF     +  T  WGLWIIHKLLL   YG +  +  S+WREKLP RP FYNY+++MF   ++                WLY    +CYHALYLP LY+TFLADFF+EED  L+N YYSEMKDAGFFD+DWE
Sbjct:  157 AIFLFGFGVPLFIDNNENGKTFKWGLWIIHKLLLTGVYGMVFLMYNSRWREKLPARPAFYNYIIIMFALYSLYLVASAFTANNAHFGFWLYGIMSVCYHALYLPLLYITFLADFFQEEDLNLENVYYSEMKDAGFFDSDWE 297          
BLAST of GT627009 vs. TrEMBL
Match: Q8LKU0_SORBI (Putative expressed protein OS=Sorghum bicolor GN=170F8.10 PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.281e-41
Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IYV GFGVPLF      T    WGLWI+HKL+L   YG I+F+  S+WR++LP +P +YNYV  M + N ++               WLY+ T +CYH+LYLP LYVTFLADFF+EED LL+N YYSEMKDAGFFDADW+
Sbjct:  133 IYVFGFGVPLFIDVDQGTGG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPAKPAYYNYVCAMLLLNGLSLFGCFLIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYYSEMKDAGFFDADWD 271          
BLAST of GT627009 vs. TAIR peptide
Match: AT3G05010.1 (| Symbols: | Protein of unknown function, transmembrane-40 | chr3:1389603-1391462 FORWARD LENGTH=300)

HSP 1 Score: 179.874 bits (455), Expect = 8.297e-46
Identity = 83/141 (58.87%), Postives = 93/141 (65.96%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AIY+ GFGVPLF       H   WGLW+IHKLLLA  YG I F+  SKWRE+LP RP FY Y+ VM   N ++               WLY  T +CYHA YLP LYVTFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  160 AIYLFGFGVPLFIDNNEHIHKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPARPAFYKYITVMLALNGLSLFACALTANGAHFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEEDLNLENVYYSEMKDAGFFDADWE 300          
BLAST of GT627009 vs. TAIR peptide
Match: AT5G27210.1 (| Symbols: | Protein of unknown function, transmembrane-40 | chr5:9572333-9574075 REVERSE LENGTH=297)

HSP 1 Score: 173.326 bits (438), Expect = 7.766e-44
Identity = 78/141 (55.32%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AI++ GFGVPLF     +  T  WGLWIIHKLLL   YG +  +  S+WREKLP RP FYNY+++MF   ++                WLY    +CYHALYLP LY+TFLADFF+EED  L+N YYSEMKDAGFFD+DWE
Sbjct:  157 AIFLFGFGVPLFIDNNENGKTFKWGLWIIHKLLLTGVYGMVFLMYNSRWREKLPARPAFYNYIIIMFALYSLYLVASAFTANNAHFGFWLYGIMSVCYHALYLPLLYITFLADFFQEEDLNLENVYYSEMKDAGFFDSDWE 297          
The following BLAST results are available for this feature:
BLAST of GT627009 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9REW7_RICCO1.238e-4457.45Putative uncharacterized protein OS=Ricinus commun... [more]
B9MZL6_POPTR2.112e-4455.32Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TUW3_VITVI3.603e-4457.14Whole genome shotgun sequence of line PN40024, sca... [more]
A5BLR4_VITVI3.603e-4457.14Putative uncharacterized protein OS=Vitis vinifera... [more]
Q94AH1_ARATH1.048e-4358.87Putative uncharacterized protein At3g05010 OS=Arab... [more]
B9I847_POPTR2.335e-4356.03Predicted protein (Fragment) OS=Populus trichocarp... [more]
B6T9J0_MAIZE5.203e-4357.86Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6SL94_MAIZE5.203e-4357.86Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q8L8S4_ARATH9.812e-4255.32Putative uncharacterized protein OS=Arabidopsis th... [more]
Q8LKU0_SORBI1.281e-4155.71Putative expressed protein OS=Sorghum bicolor GN=1... [more]
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BLAST of GT627009 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G05010.18.297e-4658.87| Symbols: | Protein of unknown function, transme... [more]
AT5G27210.17.766e-4455.32| Symbols: | Protein of unknown function, transme... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018781Uncharacterised protein family, transmembrane-40PFAMPF10160Tmemb_40coord: 2..128
score: 4.7
NoneNo IPR availableSEGsegsegcoord: 74..87
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627009 ID=GT627009; Name=GT627009; organism=Lens culinaris; type=EST; length=564bp
GCAATATATGTTCTTGGATTTGGTGTTCCGTTGTTCAATCGCACTGTTGG
AAGCACTCATACGATCATGTGGGGTTTGTGGATAATACATAAGCTATTGC
TTGCTGCAGCATATGGCTTCATTTTATTTGTACAATTCTCTAAATGGAGA
GAAAAACTTCCCCCCAGGCCAACTTTCTACAACTATGTTGTCGTAATGTT
TATATTCAACGCAATTACTCTCTTTGCTTGTGGGCTGGCAGGAATCGGTG
CGGGCCTTGGCAATTGGTTGTATGATTTTACTGTGCTGTGTTATCACGCC
CTATATCTTCCATTCCTTTATGTAACTTTTCTGGCAGATTTTTTCCGAGA
AGAAGACTTCCTTTTGGATAACGCGTATTATTCTGAGATGAAAGATGCCG
GATTCTTTGATGCCGACTGGGAATAACTCCCAAACAATTTGTACATGGAA
GGGATGACACACACATATAGTTCTATGCACTGTAAATATCTATACTTGAT
AAATTCCTAACTAAGTCAAAATGAAACTATGTTCCATGAACATCTTAATG
AAATGTTGAATCTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR018781TPRA1/CAND2/CAND8