GT620761

EST Overview
NameGT620761
Unique NameGT620761
TypeEST
OrganismLens culinaris (lentil)
Sequence length795
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT620761 vs. TrEMBL
Match: D7LN28_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_905861 PE=4 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.040e-56
Identity = 113/171 (66.08%), Postives = 126/171 (73.68%), Query Frame = 3
Query:  252 RPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764
            R RLWCS A   P    ND     +            +S R ED P YRKWK+ E EIL DIEPI LL KEILHS RY+DG RL  EDEK V+EKLLAYHP+S+DK+GCG++ IMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLR Y+R+KYP+ AERFIREH KR SS
Sbjct:   35 RRRLWCSLA-DKPQFYENDSTAEGSGAGMNTTSPAVDNSWRFED-PDYRKWKNLEAEILRDIEPIALLAKEILHSDRYLDGERLEFEDEKIVMEKLLAYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRASS 203          
BLAST of GT620761 vs. TrEMBL
Match: Q9SNB5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=F12A12.150 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.562e-55
Identity = 113/174 (64.94%), Postives = 126/174 (72.41%), Query Frame = 3
Query:  252 RPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYS---SSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764
            R RL CS A  P     ND    V  +        S    +S R ED P YRKWK+ E EIL DIEPI LL KEILHS RY+DG RL  EDEK V+EKLL YHP+S+DK+GCG++ IMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLR Y+R+KYP+ AERFIREH KR SS
Sbjct:   35 RRRLLCSLADRPQFYENNDSVSPVEGSGAAAMNVTSPVVDNSWRYED-PDYRKWKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRASS 207          
BLAST of GT620761 vs. TrEMBL
Match: B9MVV5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_740486 PE=4 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.562e-55
Identity = 112/183 (61.20%), Postives = 135/183 (73.77%), Query Frame = 3
Query:  213 HNYKHFTVRAVAARPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761
            H+++  TV  V  R R WCS A + P E  +  P S     +LR+   +SS     D+  YR+WKD+E +I  DIEPI  L KEI+HS RYMDG +LT EDEK V E+LLAYHP+S+DK+GCG++SIMVDRHPQF++SRCLFVVRTDGGWIDFSYQKCLR YIR KYP  AERFI+EH KRGS
Sbjct:   19 HHHRFATVLLVPLR-RSWCSTAESTPLEE-DGVPLSTPAALSLRKAPKNSSW----DDQNYRQWKDEEADIWRDIEPITHLAKEIIHSDRYMDGEQLTDEDEKVVAERLLAYHPNSDDKIGCGLDSIMVDRHPQFKNSRCLFVVRTDGGWIDFSYQKCLRAYIRSKYPTHAERFIKEHFKRGS 195          
BLAST of GT620761 vs. TrEMBL
Match: B9R769_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1589290 PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 9.737e-55
Identity = 100/127 (78.74%), Postives = 113/127 (88.98%), Query Frame = 3
Query:  381 DEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761
            D+P Y KW++KE+EI+NDI+ I  L KEILHS RY+DG RLT EDEKA+VEKLLA+HP+SEDK+GCG++SIMVDRHPQFRHSRCLFVVR DGGWIDFSYQKCLR YIR KYPA AERFIREH KRGS
Sbjct:  108 DDPDYCKWRNKEEEIMNDIQSITALAKEILHSDRYLDGERLTDEDEKAIVEKLLAHHPNSEDKIGCGLDSIMVDRHPQFRHSRCLFVVRIDGGWIDFSYQKCLRAYIRHKYPAHAERFIREHFKRGS 234          
BLAST of GT620761 vs. TrEMBL
Match: Q6UUF7_ORYSJ (Putative DCL protein OS=Oryza sativa subsp. japonica GN=B1052H09.115 PE=4 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.010e-43
Identity = 95/178 (53.37%), Postives = 115/178 (64.61%), Query Frame = 3
Query:  249 ARPRLWCSAAITPPSERPN---------DKPDSVNNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755
            ARP   C+AA  P   R           D+P      P  +  D   +   L        W+  E EI+ DI+P++ L K+ILHS RY DG  L+ +DE  +VEKLLAYHP  +DK+GCG+++IMVD+HPQFR SRCLFVVRTDG WIDFSYQKCLR YIREKYP+ AERFIREH KR
Sbjct:   21 ARPLAPCTAAPAPALSRRRSLLSGAHTADEPPPPTQPPPSKLPDAPGAVPPLP-------WRAAEAEIVRDIDPVVQLIKDILHSDRYGDGECLSPKDENIIVEKLLAYHPRVDDKIGCGLDAIMVDKHPQFRKSRCLFVVRTDGVWIDFSYQKCLRAYIREKYPSHAERFIREHFKR 191          
BLAST of GT620761 vs. TrEMBL
Match: B9MVV7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_287167 PE=4 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.723e-43
Identity = 84/124 (67.74%), Postives = 99/124 (79.84%), Query Frame = 3
Query:  381 DEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLK 752
            +E  YR+WKD+E EI  DIEPI  L KEILHS RY DG +LT EDEKAV  +LL YHP+ +DK+GCG++SI VDRH  F+ SRCLFVVR+DGGWIDFSY+KCLR YI+ KYP  AERFI+EH K
Sbjct:    2 EEQNYRQWKDEEAEIWRDIEPIAHLAKEILHSNRYKDGEQLTDEDEKAVAGRLLVYHPNCDDKVGCGLDSIAVDRHSHFKTSRCLFVVRSDGGWIDFSYRKCLRAYIQFKYPTHAERFIKEHFK 125          
BLAST of GT620761 vs. TrEMBL
Match: B6T2W0_MAIZE (DCL protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 8.550e-43
Identity = 82/114 (71.93%), Postives = 96/114 (84.21%), Query Frame = 3
Query:  414 EDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755
            E EIL DI+P++LL K+ILHS RY DG  L   DE  VVEKLL+YHP ++DK+GCG+++IMVDRHP+FR SRCLFVVRTDG WIDFSYQKCLR YIREKYP+ A+RFIREH KR
Sbjct:   74 EAEILRDIDPVVLLIKDILHSDRYGDGECLCPRDENVVVEKLLSYHPRAQDKIGCGLDAIMVDRHPEFRKSRCLFVVRTDGVWIDFSYQKCLRAYIREKYPSHADRFIREHFKR 187          
BLAST of GT620761 vs. TrEMBL
Match: C5X140_SORBI (Putative uncharacterized protein Sb01g008000 OS=Sorghum bicolor GN=Sb01g008000 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.905e-42
Identity = 82/118 (69.49%), Postives = 97/118 (82.20%), Query Frame = 3
Query:  402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755
            ++  E EIL DI+P++ L K+ILHS RY DG  L  +DE  VVEKLL+YHP + DK+GCG+++IMVDRHP+FR SRCLFVVRTDG WIDFSYQKCLR YIREKYP+ AERFIREH KR
Sbjct:   70 FRSVEAEILRDIDPVVQLIKDILHSERYGDGECLCPKDENVVVEKLLSYHPRAHDKIGCGLDAIMVDRHPEFRKSRCLFVVRTDGVWIDFSYQKCLRAYIREKYPSHAERFIREHFKR 187          
BLAST of GT620761 vs. TrEMBL
Match: C5X7C7_SORBI (Putative uncharacterized protein Sb02g014000 OS=Sorghum bicolor GN=Sb02g014000 PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.012e-35
Identity = 68/116 (58.62%), Postives = 95/116 (81.90%), Query Frame = 3
Query:  402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHL 749
            W + E EIL D+EP++ L K+I+HS RY +GG L+ +DEK V EKLL++HP +E+K+GCG++ IMVDRHP+F+ SRCLF VRT+G   DFSY+KCLR Y+REKYP+ A++F+++HL
Sbjct:   54 WDEAEAEILRDVEPVVDLVKDIIHSRRYRNGGFLSPDDEKVVTEKLLSHHPRAEEKIGCGLDGIMVDRHPEFK-SRCLFAVRTNGDLEDFSYRKCLRAYLREKYPSYADKFLKKHL 168          
BLAST of GT620761 vs. TrEMBL
Match: B6T6D8_MAIZE (DCL protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.322e-35
Identity = 68/121 (56.20%), Postives = 97/121 (80.17%), Query Frame = 3
Query:  402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764
            W + E EIL D+EPI+ + K+I+HS RY +G  L+ +DEK V EKLL++HP +E+K+GCG++ IMVDRHP+F+ SRCLFVVRT+G W DFSY KCLR Y+++KYP+ +++F+++HL   SS
Sbjct:   54 WDEAETEILRDVEPIVNIVKDIIHSRRYKNGEFLSPDDEKVVREKLLSHHPRAEEKIGCGLDGIMVDRHPEFK-SRCLFVVRTNGDWEDFSYHKCLRAYLQKKYPSYSDKFLKKHLVNKSS 173          
BLAST of GT620761 vs. SwissProt
Match: DCL_SOLLC (Protein DCL, chloroplastic OS=Solanum lycopersicum GN=DCL PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.204e-26
Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 3
Query:  402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755
            W D ED+IL D  P++   + ILHS +Y  G RL+ + ++ ++++LL YHP  + K+G G++ I V  HP F +SRCLF+VR DG  +DFSY KC++  IR+ YP  A+ FI  H ++
Sbjct:  102 WVDWEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVDYITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRK 219          
BLAST of GT620761 vs. TAIR peptide
Match: AT3G46630.1 (| Symbols: | Protein of unknown function (DUF3223) | chr3:17181138-17182346 REVERSE LENGTH=207)

HSP 1 Score: 219.55 bits (558), Expect = 1.648e-57
Identity = 113/174 (64.94%), Postives = 126/174 (72.41%), Query Frame = 3
Query:  252 RPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYS---SSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764
            R RL CS A  P     ND    V  +        S    +S R ED P YRKWK+ E EIL DIEPI LL KEILHS RY+DG RL  EDEK V+EKLL YHP+S+DK+GCG++ IMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLR Y+R+KYP+ AERFIREH KR SS
Sbjct:   35 RRRLLCSLADRPQFYENNDSVSPVEGSGAAAMNVTSPVVDNSWRYED-PDYRKWKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRASS 207          
BLAST of GT620761 vs. TAIR peptide
Match: AT1G45230.1 (| Symbols: | Protein of unknown function (DUF3223) | chr1:17169874-17171381 REVERSE LENGTH=219)

HSP 1 Score: 120.553 bits (301), Expect = 1.042e-27
Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 3
Query:  408 DKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755
            D ED+IL    P++   + ILHS +Y +  RL+ E E+ ++E LL YHP  E K+GCGI+ IMV  HP F  SRC+F+VR DG  +DFSY KC++  I++KYP  A+ FI  H ++
Sbjct:   99 DWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRK 214          
BLAST of GT620761 vs. TAIR peptide
Match: AT1G45230.2 (| Symbols: | Protein of unknown function (DUF3223) | chr1:17169874-17171381 REVERSE LENGTH=219)

HSP 1 Score: 119.398 bits (298), Expect = 2.320e-27
Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 3
Query:  408 DKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755
            D ED+IL    P++   + ILHS +Y +  RL+ E E+ ++E LL YHP  E K+GCGI+ IMV  HP F  SRC+F+VR DG  +DFSY KC++  I++KYP  A+ FI  H ++
Sbjct:   99 DWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVWHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRK 214          
BLAST of GT620761 vs. TAIR peptide
Match: AT2G40030.1 (| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976)

HSP 1 Score: 114.005 bits (284), Expect = 9.749e-26
Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  324 NNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755
            N+TP   R + + + +          +  +E E+L+D+EP++   ++I+H   Y DG  ++ +D+  V+EK+L +HP  E K+G G++ I VD+H  F  SRC FVV TDG   DFSY+K L  Y+ +KYP  AE FI ++  +
Sbjct: 1706 NHTPRPPRSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTK 1849          
BLAST of GT620761 vs. TAIR peptide
Match: AT1G63020.2 (| Symbols: NRPD1A | nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453)

HSP 1 Score: 52.7582 bits (125), Expect = 2.667e-7
Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 3
Query:  432 DIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761
            +IE +    K ILHS    +   L  E ++ +V+ +L  HP+S +K+G G++ I V +  +   S C  VVR DG + DFSY KC+    +   P     +  ++LK G+
Sbjct: 1338 NIELLSQSLKRILHS---YEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRVAKS-KHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLKNGT 1443          
BLAST of GT620761 vs. TAIR peptide
Match: AT1G63020.1 (| Symbols: NRPD1A, POL IVA, SDE4, NRPD1, SMD2 | nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453)

HSP 1 Score: 52.7582 bits (125), Expect = 2.667e-7
Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 3
Query:  432 DIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761
            +IE +    K ILHS    +   L  E ++ +V+ +L  HP+S +K+G G++ I V +  +   S C  VVR DG + DFSY KC+    +   P     +  ++LK G+
Sbjct: 1338 NIELLSQSLKRILHS---YEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRVAKS-KHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLKNGT 1443          
The following BLAST results are available for this feature:
BLAST of GT620761 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7LN28_ARALY1.040e-5666.08Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9SNB5_ARATH2.562e-5564.94Putative uncharacterized protein OS=Arabidopsis th... [more]
B9MVV5_POPTR2.562e-5561.20Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9R769_RICCO9.737e-5578.74Putative uncharacterized protein OS=Ricinus commun... [more]
Q6UUF7_ORYSJ1.010e-4353.37Putative DCL protein OS=Oryza sativa subsp. japoni... [more]
B9MVV7_POPTR1.723e-4367.74Predicted protein (Fragment) OS=Populus trichocarp... [more]
B6T2W0_MAIZE8.550e-4371.93DCL protein OS=Zea mays PE=2 SV=1[more]
C5X140_SORBI1.905e-4269.49Putative uncharacterized protein Sb01g008000 OS=So... [more]
C5X7C7_SORBI1.012e-3558.62Putative uncharacterized protein Sb02g014000 OS=So... [more]
B6T6D8_MAIZE1.322e-3556.20DCL protein OS=Zea mays PE=2 SV=1[more]
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BLAST of GT620761 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
DCL_SOLLC5.204e-2644.07Protein DCL, chloroplastic OS=Solanum lycopersicum... [more]
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BLAST of GT620761 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT3G46630.11.648e-5764.94| Symbols: | Protein of unknown function (DUF3223... [more]
AT1G45230.11.042e-2747.41| Symbols: | Protein of unknown function (DUF3223... [more]
AT1G45230.22.320e-2747.41| Symbols: | Protein of unknown function (DUF3223... [more]
AT2G40030.19.749e-2637.50| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | n... [more]
AT1G63020.22.667e-732.73| Symbols: NRPD1A | nuclear RNA polymerase D1A | c... [more]
AT1G63020.12.667e-732.73| Symbols: NRPD1A, POL IVA, SDE4, NRPD1, SMD2 | nu... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015801Copper amine oxidase, N2/N3-terminalGENE3D3.10.450.40no descriptioncoord: 91..195
score: 1.2
IPR021602Protein of unknown function DUF3223PFAMPF11523DUF3223coord: 111..187
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 13..28
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620761 ID=GT620761; Name=GT620761; organism=Lens culinaris; type=EST; length=795bp
GGAAGAGAGACATAAAATTCAAGGGTGAGGCATCCCCGTAGATAACCGGT
TTTGTTTAGGGGTCCATACTCCATTGTTGCGCGAGTGTGTCACTCTCACT
CAAATCTACGTTTTCAGTTATTAATTAATTAACGCAACAAAGAACCCAAC
CCACAACAAAAATGGCCGCTCCTCATCTCCTAAAACAAGCTCTTCTCCTT
CGCGCTTGCTTACATAACTACAAACACTTTACCGTCAGAGCAGTCGCGGC
GCGCCCCCGACTATGGTGCAGCGCCGCCATCACTCCACCGTCGGAAAGAC
CAAACGATAAACCTGACTCTGTCAACAACACGCCAAATCTCAGGCGCGGT
GATTACTCGTCGAGTTCCCTTCGTTTGGAGGATGAACCTGTGTACCGGAA
ATGGAAGGATAAAGAAGATGAGATTCTCAACGACATTGAACCAATCCTCT
TGCTTACCAAGGAGATTCTTCACTCGCCAAGGTATATGGATGGAGGGAGG
TTAACTGTGGAGGATGAGAAAGCTGTTGTAGAGAAGCTCCTTGCTTATCA
TCCACACTCTGAAGATAAGATGGGATGTGGTATTGAATCCATTATGGTTG
ACCGTCATCCCCAATTTCGACACTCAAGGTGTCTTTTTGTTGTAAGAACT
GATGGTGGCTGGATTGATTTCTCATATCAGAAGTGCCTTCGGGAATACAT
TAGAGAGAAGTACCCAGCTGACGCCGAAAGGTTTATTCGAGAACATCTTA
AGCGCGGGAGTAGTTGATGTATATATATTAGAATTTGTTTACTTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO:0008131primary amine oxidase activity
GO:0048038quinone binding
Vocabulary: Biological Process
TermDefinition
GO:0009308amine metabolic process
GO:0055114obsolete oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR015801Copper amine oxidase, N2/N3-terminal
IPR021602DUF3223