GT620761
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620761 vs. TrEMBL
Match: D7LN28_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_905861 PE=4 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.040e-56 Identity = 113/171 (66.08%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 252 RPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764 R RLWCS A P ND + +S R ED P YRKWK+ E EIL DIEPI LL KEILHS RY+DG RL EDEK V+EKLLAYHP+S+DK+GCG++ IMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLR Y+R+KYP+ AERFIREH KR SS Sbjct: 35 RRRLWCSLA-DKPQFYENDSTAEGSGAGMNTTSPAVDNSWRFED-PDYRKWKNLEAEILRDIEPIALLAKEILHSDRYLDGERLEFEDEKIVMEKLLAYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRASS 203
BLAST of GT620761 vs. TrEMBL
Match: Q9SNB5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=F12A12.150 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.562e-55 Identity = 113/174 (64.94%), Postives = 126/174 (72.41%), Query Frame = 3 Query: 252 RPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYS---SSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764 R RL CS A P ND V + S +S R ED P YRKWK+ E EIL DIEPI LL KEILHS RY+DG RL EDEK V+EKLL YHP+S+DK+GCG++ IMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLR Y+R+KYP+ AERFIREH KR SS Sbjct: 35 RRRLLCSLADRPQFYENNDSVSPVEGSGAAAMNVTSPVVDNSWRYED-PDYRKWKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRASS 207
BLAST of GT620761 vs. TrEMBL
Match: B9MVV5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_740486 PE=4 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.562e-55 Identity = 112/183 (61.20%), Postives = 135/183 (73.77%), Query Frame = 3 Query: 213 HNYKHFTVRAVAARPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761 H+++ TV V R R WCS A + P E + P S +LR+ +SS D+ YR+WKD+E +I DIEPI L KEI+HS RYMDG +LT EDEK V E+LLAYHP+S+DK+GCG++SIMVDRHPQF++SRCLFVVRTDGGWIDFSYQKCLR YIR KYP AERFI+EH KRGS Sbjct: 19 HHHRFATVLLVPLR-RSWCSTAESTPLEE-DGVPLSTPAALSLRKAPKNSSW----DDQNYRQWKDEEADIWRDIEPITHLAKEIIHSDRYMDGEQLTDEDEKVVAERLLAYHPNSDDKIGCGLDSIMVDRHPQFKNSRCLFVVRTDGGWIDFSYQKCLRAYIRSKYPTHAERFIKEHFKRGS 195
BLAST of GT620761 vs. TrEMBL
Match: B9R769_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1589290 PE=4 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 9.737e-55 Identity = 100/127 (78.74%), Postives = 113/127 (88.98%), Query Frame = 3 Query: 381 DEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761 D+P Y KW++KE+EI+NDI+ I L KEILHS RY+DG RLT EDEKA+VEKLLA+HP+SEDK+GCG++SIMVDRHPQFRHSRCLFVVR DGGWIDFSYQKCLR YIR KYPA AERFIREH KRGS Sbjct: 108 DDPDYCKWRNKEEEIMNDIQSITALAKEILHSDRYLDGERLTDEDEKAIVEKLLAHHPNSEDKIGCGLDSIMVDRHPQFRHSRCLFVVRIDGGWIDFSYQKCLRAYIRHKYPAHAERFIREHFKRGS 234
BLAST of GT620761 vs. TrEMBL
Match: Q6UUF7_ORYSJ (Putative DCL protein OS=Oryza sativa subsp. japonica GN=B1052H09.115 PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.010e-43 Identity = 95/178 (53.37%), Postives = 115/178 (64.61%), Query Frame = 3 Query: 249 ARPRLWCSAAITPPSERPN---------DKPDSVNNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755 ARP C+AA P R D+P P + D + L W+ E EI+ DI+P++ L K+ILHS RY DG L+ +DE +VEKLLAYHP +DK+GCG+++IMVD+HPQFR SRCLFVVRTDG WIDFSYQKCLR YIREKYP+ AERFIREH KR Sbjct: 21 ARPLAPCTAAPAPALSRRRSLLSGAHTADEPPPPTQPPPSKLPDAPGAVPPLP-------WRAAEAEIVRDIDPVVQLIKDILHSDRYGDGECLSPKDENIIVEKLLAYHPRVDDKIGCGLDAIMVDKHPQFRKSRCLFVVRTDGVWIDFSYQKCLRAYIREKYPSHAERFIREHFKR 191
BLAST of GT620761 vs. TrEMBL
Match: B9MVV7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_287167 PE=4 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.723e-43 Identity = 84/124 (67.74%), Postives = 99/124 (79.84%), Query Frame = 3 Query: 381 DEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLK 752 +E YR+WKD+E EI DIEPI L KEILHS RY DG +LT EDEKAV +LL YHP+ +DK+GCG++SI VDRH F+ SRCLFVVR+DGGWIDFSY+KCLR YI+ KYP AERFI+EH K Sbjct: 2 EEQNYRQWKDEEAEIWRDIEPIAHLAKEILHSNRYKDGEQLTDEDEKAVAGRLLVYHPNCDDKVGCGLDSIAVDRHSHFKTSRCLFVVRSDGGWIDFSYRKCLRAYIQFKYPTHAERFIKEHFK 125
BLAST of GT620761 vs. TrEMBL
Match: B6T2W0_MAIZE (DCL protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 8.550e-43 Identity = 82/114 (71.93%), Postives = 96/114 (84.21%), Query Frame = 3 Query: 414 EDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755 E EIL DI+P++LL K+ILHS RY DG L DE VVEKLL+YHP ++DK+GCG+++IMVDRHP+FR SRCLFVVRTDG WIDFSYQKCLR YIREKYP+ A+RFIREH KR Sbjct: 74 EAEILRDIDPVVLLIKDILHSDRYGDGECLCPRDENVVVEKLLSYHPRAQDKIGCGLDAIMVDRHPEFRKSRCLFVVRTDGVWIDFSYQKCLRAYIREKYPSHADRFIREHFKR 187
BLAST of GT620761 vs. TrEMBL
Match: C5X140_SORBI (Putative uncharacterized protein Sb01g008000 OS=Sorghum bicolor GN=Sb01g008000 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.905e-42 Identity = 82/118 (69.49%), Postives = 97/118 (82.20%), Query Frame = 3 Query: 402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755 ++ E EIL DI+P++ L K+ILHS RY DG L +DE VVEKLL+YHP + DK+GCG+++IMVDRHP+FR SRCLFVVRTDG WIDFSYQKCLR YIREKYP+ AERFIREH KR Sbjct: 70 FRSVEAEILRDIDPVVQLIKDILHSERYGDGECLCPKDENVVVEKLLSYHPRAHDKIGCGLDAIMVDRHPEFRKSRCLFVVRTDGVWIDFSYQKCLRAYIREKYPSHAERFIREHFKR 187
BLAST of GT620761 vs. TrEMBL
Match: C5X7C7_SORBI (Putative uncharacterized protein Sb02g014000 OS=Sorghum bicolor GN=Sb02g014000 PE=4 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.012e-35 Identity = 68/116 (58.62%), Postives = 95/116 (81.90%), Query Frame = 3 Query: 402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHL 749 W + E EIL D+EP++ L K+I+HS RY +GG L+ +DEK V EKLL++HP +E+K+GCG++ IMVDRHP+F+ SRCLF VRT+G DFSY+KCLR Y+REKYP+ A++F+++HL Sbjct: 54 WDEAEAEILRDVEPVVDLVKDIIHSRRYRNGGFLSPDDEKVVTEKLLSHHPRAEEKIGCGLDGIMVDRHPEFK-SRCLFAVRTNGDLEDFSYRKCLRAYLREKYPSYADKFLKKHL 168
BLAST of GT620761 vs. TrEMBL
Match: B6T6D8_MAIZE (DCL protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.322e-35 Identity = 68/121 (56.20%), Postives = 97/121 (80.17%), Query Frame = 3 Query: 402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764 W + E EIL D+EPI+ + K+I+HS RY +G L+ +DEK V EKLL++HP +E+K+GCG++ IMVDRHP+F+ SRCLFVVRT+G W DFSY KCLR Y+++KYP+ +++F+++HL SS Sbjct: 54 WDEAETEILRDVEPIVNIVKDIIHSRRYKNGEFLSPDDEKVVREKLLSHHPRAEEKIGCGLDGIMVDRHPEFK-SRCLFVVRTNGDWEDFSYHKCLRAYLQKKYPSYSDKFLKKHLVNKSS 173
BLAST of GT620761 vs. SwissProt
Match: DCL_SOLLC (Protein DCL, chloroplastic OS=Solanum lycopersicum GN=DCL PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.204e-26 Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 402 WKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755 W D ED+IL D P++ + ILHS +Y G RL+ + ++ ++++LL YHP + K+G G++ I V HP F +SRCLF+VR DG +DFSY KC++ IR+ YP A+ FI H ++ Sbjct: 102 WVDWEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVDYITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRK 219
BLAST of GT620761 vs. TAIR peptide
Match: AT3G46630.1 (| Symbols: | Protein of unknown function (DUF3223) | chr3:17181138-17182346 REVERSE LENGTH=207) HSP 1 Score: 219.55 bits (558), Expect = 1.648e-57 Identity = 113/174 (64.94%), Postives = 126/174 (72.41%), Query Frame = 3 Query: 252 RPRLWCSAAITPPSERPNDKPDSVNNTPNLRRGDYS---SSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGSS 764 R RL CS A P ND V + S +S R ED P YRKWK+ E EIL DIEPI LL KEILHS RY+DG RL EDEK V+EKLL YHP+S+DK+GCG++ IMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLR Y+R+KYP+ AERFIREH KR SS Sbjct: 35 RRRLLCSLADRPQFYENNDSVSPVEGSGAAAMNVTSPVVDNSWRYED-PDYRKWKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRASS 207
BLAST of GT620761 vs. TAIR peptide
Match: AT1G45230.1 (| Symbols: | Protein of unknown function (DUF3223) | chr1:17169874-17171381 REVERSE LENGTH=219) HSP 1 Score: 120.553 bits (301), Expect = 1.042e-27 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 408 DKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755 D ED+IL P++ + ILHS +Y + RL+ E E+ ++E LL YHP E K+GCGI+ IMV HP F SRC+F+VR DG +DFSY KC++ I++KYP A+ FI H ++ Sbjct: 99 DWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRK 214
BLAST of GT620761 vs. TAIR peptide
Match: AT1G45230.2 (| Symbols: | Protein of unknown function (DUF3223) | chr1:17169874-17171381 REVERSE LENGTH=219) HSP 1 Score: 119.398 bits (298), Expect = 2.320e-27 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 408 DKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755 D ED+IL P++ + ILHS +Y + RL+ E E+ ++E LL YHP E K+GCGI+ IMV HP F SRC+F+VR DG +DFSY KC++ I++KYP A+ FI H ++ Sbjct: 99 DWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVWHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRK 214
BLAST of GT620761 vs. TAIR peptide
Match: AT2G40030.1 (| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976) HSP 1 Score: 114.005 bits (284), Expect = 9.749e-26 Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 324 NNTPNLRRGDYSSSSLRLEDEPVYRKWKDKEDEILNDIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKR 755 N+TP R + + + + + +E E+L+D+EP++ ++I+H Y DG ++ +D+ V+EK+L +HP E K+G G++ I VD+H F SRC FVV TDG DFSY+K L Y+ +KYP AE FI ++ + Sbjct: 1706 NHTPRPPRSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTK 1849
BLAST of GT620761 vs. TAIR peptide
Match: AT1G63020.2 (| Symbols: NRPD1A | nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453) HSP 1 Score: 52.7582 bits (125), Expect = 2.667e-7 Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 432 DIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761 +IE + K ILHS + L E ++ +V+ +L HP+S +K+G G++ I V + + S C VVR DG + DFSY KC+ + P + ++LK G+ Sbjct: 1338 NIELLSQSLKRILHS---YEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRVAKS-KHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLKNGT 1443
BLAST of GT620761 vs. TAIR peptide
Match: AT1G63020.1 (| Symbols: NRPD1A, POL IVA, SDE4, NRPD1, SMD2 | nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453) HSP 1 Score: 52.7582 bits (125), Expect = 2.667e-7 Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 432 DIEPILLLTKEILHSPRYMDGGRLTVEDEKAVVEKLLAYHPHSEDKMGCGIESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPADAERFIREHLKRGS 761 +IE + K ILHS + L E ++ +V+ +L HP+S +K+G G++ I V + + S C VVR DG + DFSY KC+ + P + ++LK G+ Sbjct: 1338 NIELLSQSLKRILHS---YEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRVAKS-KHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLKNGT 1443 The following BLAST results are available for this feature:
BLAST of GT620761 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620761 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT620761 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620761 ID=GT620761; Name=GT620761; organism=Lens culinaris; type=EST; length=795bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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