GT621920

EST Overview
NameGT621920
Unique NameGT621920
TypeEST
OrganismLens culinaris (lentil)
Sequence length453
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT621920 vs. TrEMBL
Match: C6TLZ2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.862e-17
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            MADS++SIQYLKDF++SQI DD+ W FN KLLRAAGLFAGSI+LMRNYG LMAI
Sbjct:    1 MADSVISIQYLKDFVNSQIYDDEKWAFNAKLLRAAGLFAGSILLMRNYGALMAI 54          
BLAST of GT621920 vs. TrEMBL
Match: B9RLM8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1469630 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.644e-14
Identity = 37/54 (68.52%), Postives = 48/54 (88.89%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            MADS++S++ LK F++SQI+D++ W  N+KLLRAAGLFAGSI LMRNYGDLMA+
Sbjct:    1 MADSMISVEKLKAFLNSQIHDEEKWALNMKLLRAAGLFAGSIFLMRNYGDLMAV 54          
BLAST of GT621920 vs. TrEMBL
Match: B9N051_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_742374 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.265e-11
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            MADS +SI  LK    SQ++D++ W  N+KLLRA GLFAGSI LMRNYGDLMAI
Sbjct:    1 MADSSVSIDQLKAIWHSQVHDEEKWALNMKLLRAVGLFAGSIFLMRNYGDLMAI 54          
BLAST of GT621920 vs. TrEMBL
Match: D7SIK2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008105001 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.277e-11
Identity = 32/54 (59.26%), Postives = 45/54 (83.33%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            MAD+++S+  +K F ++QI+D++ W  N+KLLRAAGLFAGSI LMRN+G+ MAI
Sbjct:    1 MADTVVSLDNIKAFWNAQIHDEEKWALNMKLLRAAGLFAGSIFLMRNFGEYMAI 54          
BLAST of GT621920 vs. TrEMBL
Match: C5WT79_SORBI (Putative uncharacterized protein Sb01g015010 OS=Sorghum bicolor GN=Sb01g015010 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.385e-10
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 2
Query:   86 SIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            S++ LK   DSQ+ND++ W  N KLL+AAGLFAGSI LMRN+GDLMAI
Sbjct:    6 SVEKLKALWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI 53          
BLAST of GT621920 vs. TrEMBL
Match: B6SPH3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.940e-10
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 2
Query:   86 SIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            +++ LK   DSQ+ND++ W  N KLL+AAGLFAGSI LMRN+GDLMAI
Sbjct:    6 AVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI 53          
BLAST of GT621920 vs. TrEMBL
Match: D7M0P9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908751 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.499e-9
Identity = 27/54 (50.00%), Postives = 42/54 (77.78%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            M ++++S+  LK F  S+++D++ W  N+KLLRA G+FAG + LMR+YGDLMA+
Sbjct:    1 MVNNVVSLDKLKAFWHSEVHDEQKWAVNMKLLRALGMFAGGVFLMRSYGDLMAV 54          
BLAST of GT621920 vs. TrEMBL
Match: Q6IDR6_ARATH (At5g08040 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.002e-8
Identity = 26/54 (48.15%), Postives = 42/54 (77.78%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            M ++++SI+ +K    S+++D++ W  N+KLLRA G+FAG +VLMR+YGDLM +
Sbjct:    1 MVNNVVSIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54          
BLAST of GT621920 vs. TrEMBL
Match: Q2QN85_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os12g38650 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.309e-8
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            MA +  +++ +K   DSQ+ND++ W FN KL++A GLF  SI +MRN+GDLMAI
Sbjct:    1 MAAAAAAVEKVKALWDSQVNDEEAWAFNYKLMKAGGLFVASIFVMRNFGDLMAI 54          
BLAST of GT621920 vs. TrEMBL
Match: A2ZLY7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38840 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.309e-8
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            MA +  +++ +K   DSQ+ND++ W FN KL++A GLF  SI +MRN+GDLMAI
Sbjct:    1 MAAAAAAVEKVKALWDSQVNDEEAWAFNYKLMKAGGLFVASIFVMRNFGDLMAI 54          
BLAST of GT621920 vs. SwissProt
Match: TOM5_ARATH (Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana GN=TOM5 PE=1 SV=3)

HSP 1 Score: 63.1586 bits (152), Expect = 6.089e-10
Identity = 26/54 (48.15%), Postives = 42/54 (77.78%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            M ++++SI+ +K    S+++D++ W  N+KLLRA G+FAG +VLMR+YGDLM +
Sbjct:    1 MVNNVVSIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54          
BLAST of GT621920 vs. TAIR peptide
Match: AT5G08040.1 (| Symbols: TOM5 | mitochondrial import receptor subunit TOM5 homolog | chr5:2577358-2578073 REVERSE LENGTH=54)

HSP 1 Score: 63.1586 bits (152), Expect = 7.172e-11
Identity = 26/54 (48.15%), Postives = 42/54 (77.78%), Query Frame = 2
Query:   68 MADSILSIQYLKDFIDSQINDDKNWDFNVKLLRAAGLFAGSIVLMRNYGDLMAI 229
            M ++++SI+ +K    S+++D++ W  N+KLLRA G+FAG +VLMR+YGDLM +
Sbjct:    1 MVNNVVSIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54          
The following BLAST results are available for this feature:
BLAST of GT621920 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TLZ2_SOYBN5.862e-1779.63Putative uncharacterized protein OS=Glycine max PE... [more]
B9RLM8_RICCO4.644e-1468.52Putative uncharacterized protein OS=Ricinus commun... [more]
B9N051_POPTR1.265e-1166.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SIK2_VITVI6.277e-1159.26Whole genome shotgun sequence of line PN40024, sca... [more]
C5WT79_SORBI2.385e-1066.67Putative uncharacterized protein Sb01g015010 OS=So... [more]
B6SPH3_MAIZE6.940e-1064.58Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
D7M0P9_ARALY4.499e-950.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q6IDR6_ARATH1.002e-848.15At5g08040 OS=Arabidopsis thaliana PE=4 SV=1[more]
Q2QN85_ORYSJ1.309e-851.85Putative uncharacterized protein OS=Oryza sativa s... [more]
A2ZLY7_ORYSI1.309e-851.85Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT621920 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
TOM5_ARATH6.089e-1048.15Mitochondrial import receptor subunit TOM5 homolog... [more]
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BLAST of GT621920 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G08040.17.172e-1148.15| Symbols: TOM5 | mitochondrial import receptor su... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT621920 ID=GT621920; Name=GT621920; organism=Lens culinaris; type=EST; length=453bp
GTCCATTACTCACTGCGTGCTAAAAACACAGAACCTAAACCCTAAAACCT
CTTTTTCTCTCGCATCAATGGCTGACTCTATCTTATCGATTCAGTACCTC
AAAGATTTCATTGATTCTCAAATCAATGACGACAAGAATTGGGACTTCAA
TGTGAAATTGCTTCGTGCTGCTGGACTGTTTGCAGGATCAATAGTCCTCA
TGCGAAATTATGGTGACCTTATGGCAATCTGAGAGTATAAGAGTCTGTTG
TCTGTAATGAGTTGCTGCTATATCTACTTAAACCCAATGTCTTGGCTGTA
GTTTCAATTTAAAATGAGCAGGATTACTTTCAGGCTTTTGATAAGCGATT
ATCATGGCATTTTCAATTTGGTTATGTTGACTTTGTGTCTCTGCACATTT
CCTTGTGCCGAAATGATTGACTTTTGATATGATATAGACTATTTTTGCAT
TCT
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