GT622428

EST Overview
NameGT622428
Unique NameGT622428
TypeEST
OrganismLens culinaris (lentil)
Sequence length689
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT622428 vs. TrEMBL
Match: D7UAE4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014643001 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.009e-36
Identity = 75/105 (71.43%), Postives = 83/105 (79.05%), Query Frame = 1
Query:  361 MMVDGSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRPAQNL 675
            M  +G CFVEWKEQFVSQERGHRVVHY+LKDSAG   LAVVGTERSVRHM YV+A++FL   G E     GFKWRSRREVVDWLTSMLSK+HL  D S  P+ +L
Sbjct:    1 MSANGQCFVEWKEQFVSQERGHRVVHYFLKDSAGNFILAVVGTERSVRHMFYVVADEFLNAYGSENSVHAGFKWRSRREVVDWLTSMLSKQHLPGDGSESPSNDL 105          
BLAST of GT622428 vs. TrEMBL
Match: B9S9Q9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0521230 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.009e-36
Identity = 77/105 (73.33%), Postives = 85/105 (80.95%), Query Frame = 1
Query:  361 MMVDGSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRPAQNL 675
            M   G  FVEWKEQFVSQERG+RVVHY+LKDSAGES LAVVGTERSVRHM YV+AE+F++  G E     GFKWRSRREVVDWLTSMLSK+HLQ DRS  P  +L
Sbjct:    1 MTGSGHYFVEWKEQFVSQERGNRVVHYFLKDSAGESILAVVGTERSVRHMFYVVAEEFVQAYGTEHSIHAGFKWRSRREVVDWLTSMLSKQHLQGDRSKSPKHDL 105          
BLAST of GT622428 vs. TrEMBL
Match: A5BC10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023803 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.009e-36
Identity = 75/105 (71.43%), Postives = 83/105 (79.05%), Query Frame = 1
Query:  361 MMVDGSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRPAQNL 675
            M  +G CFVEWKEQFVSQERGHRVVHY+LKDSAG   LAVVGTERSVRHM YV+A++FL   G E     GFKWRSRREVVDWLTSMLSK+HL  D S  P+ +L
Sbjct:    1 MSANGQCFVEWKEQFVSQERGHRVVHYFLKDSAGNFILAVVGTERSVRHMFYVVADEFLNAYGSENSVHAGFKWRSRREVVDWLTSMLSKQHLPGDGSESPSNDL 105          
BLAST of GT622428 vs. TrEMBL
Match: B9GFK5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1070019 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.845e-36
Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 1
Query:  361 MMVDGSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRS 654
            M   G CFVEWKEQF+SQERG+RVVHY+LKDSAGES +AVVGTERSVRHM YV+AE+F+++ G E     GFKWRSRREVVDWLTSMLSK+H+Q D S
Sbjct:    1 MTGSGHCFVEWKEQFISQERGNRVVHYFLKDSAGESIIAVVGTERSVRHMFYVVAEEFVQVYGAENSIHAGFKWRSRREVVDWLTSMLSKQHVQGDGS 98          
BLAST of GT622428 vs. TrEMBL
Match: D7MKJ4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495647 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.688e-32
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  382 FVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRP 663
            FVEWKE FVSQERG+RVVHY+LKDSAGES LAVVGTERSVRHM YV++E+F+ I G E     GFKWRSRREVVDWLTSMLSK+  Q + S  P
Sbjct:    8 FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVVGTERSVRHMFYVVSEEFVRIHGSENSIHAGFKWRSRREVVDWLTSMLSKQSTQGNWSKSP 101          
BLAST of GT622428 vs. TrEMBL
Match: Q8W109_ARATH (AT5g55600/MDF20_4 OS=Arabidopsis thaliana GN=At5g55600 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.141e-31
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  382 FVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRP 663
            FVEWKE FVSQERG+RVVHY+LKDSAGES LAV+GTERSVRHM YV++E+F+ I G E     GFKWRSRREVVDWLTSMLSK+  Q + S  P
Sbjct:    8 FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSP 101          
BLAST of GT622428 vs. TrEMBL
Match: Q0WQ11_ARATH (Putative uncharacterized protein At5g55600 OS=Arabidopsis thaliana GN=At5g55600 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.141e-31
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  382 FVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRP 663
            FVEWKE FVSQERG+RVVHY+LKDSAGES LAV+GTERSVRHM YV++E+F+ I G E     GFKWRSRREVVDWLTSMLSK+  Q + S  P
Sbjct:    8 FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSP 101          
BLAST of GT622428 vs. TrEMBL
Match: Q69J34_ORYSJ (Putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein OS=Oryza sativa subsp. japonica GN=OSJNBa0072I06.22-1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.595e-25
Identity = 63/96 (65.62%), Postives = 70/96 (72.92%), Query Frame = 1
Query:  373 GSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGF--KWRSRREVVDWLTSMLSKKHLQSDRS 654
            G  FV W+E FVSQERG RVVHYYL+D+AG S LAVVGTERS+RHM YV++EDF E  G +G  P  F  KWRSRREVVDWL S L  K L S  S
Sbjct:   10 GPEFVRWREDFVSQERGSRVVHYYLEDAAGASHLAVVGTERSLRHMLYVVSEDFREAQGADGGGPGVFARKWRSRREVVDWLASFLPAKSLASKLS 105          
BLAST of GT622428 vs. TrEMBL
Match: Q69J33_ORYSJ (Agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein-like OS=Oryza sativa subsp. japonica GN=OSJNBa0072I06.22-2 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.595e-25
Identity = 63/96 (65.62%), Postives = 70/96 (72.92%), Query Frame = 1
Query:  373 GSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGF--KWRSRREVVDWLTSMLSKKHLQSDRS 654
            G  FV W+E FVSQERG RVVHYYL+D+AG S LAVVGTERS+RHM YV++EDF E  G +G  P  F  KWRSRREVVDWL S L  K L S  S
Sbjct:   10 GPEFVRWREDFVSQERGSRVVHYYLEDAAGASHLAVVGTERSLRHMLYVVSEDFREAQGADGGGPGVFARKWRSRREVVDWLASFLPAKSLASKLS 105          
BLAST of GT622428 vs. TrEMBL
Match: A2YNJ7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26810 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.595e-25
Identity = 63/96 (65.62%), Postives = 70/96 (72.92%), Query Frame = 1
Query:  373 GSCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGF--KWRSRREVVDWLTSMLSKKHLQSDRS 654
            G  FV W+E FVSQERG RVVHYYL+D+AG S LAVVGTERS+RHM YV++EDF E  G +G  P  F  KWRSRREVVDWL S L  K L S  S
Sbjct:   10 GPEFVRWREDFVSQERGSRVVHYYLEDAAGASHLAVVGTERSLRHMLYVVSEDFREAQGADGGGPGVFARKWRSRREVVDWLASFLPAKSLASKLS 105          
BLAST of GT622428 vs. TAIR peptide
Match: AT5G55600.3 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr5:22522232-22524796 REVERSE LENGTH=663)

HSP 1 Score: 140.584 bits (353), Expect = 7.759e-34
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  382 FVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRP 663
            FVEWKE FVSQERG+RVVHY+LKDSAGES LAV+GTERSVRHM YV++E+F+ I G E     GFKWRSRREVVDWLTSMLSK+  Q + S  P
Sbjct:    8 FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSP 101          
BLAST of GT622428 vs. TAIR peptide
Match: AT5G55600.2 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr5:22522232-22524796 REVERSE LENGTH=663)

HSP 1 Score: 140.584 bits (353), Expect = 7.759e-34
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  382 FVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRP 663
            FVEWKE FVSQERG+RVVHY+LKDSAGES LAV+GTERSVRHM YV++E+F+ I G E     GFKWRSRREVVDWLTSMLSK+  Q + S  P
Sbjct:    8 FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSP 101          
BLAST of GT622428 vs. TAIR peptide
Match: AT5G55600.1 (| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr5:22522232-22524796 REVERSE LENGTH=663)

HSP 1 Score: 140.584 bits (353), Expect = 7.759e-34
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  382 FVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKKHLQSDRSVRP 663
            FVEWKE FVSQERG+RVVHY+LKDSAGES LAV+GTERSVRHM YV++E+F+ I G E     GFKWRSRREVVDWLTSMLSK+  Q + S  P
Sbjct:    8 FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSP 101          
The following BLAST results are available for this feature:
BLAST of GT622428 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7UAE4_VITVI2.009e-3671.43Whole genome shotgun sequence of line PN40024, sca... [more]
B9S9Q9_RICCO2.009e-3673.33DNA binding protein, putative OS=Ricinus communis ... [more]
A5BC10_VITVI2.009e-3671.43Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GFK5_POPTR5.845e-3673.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7MKJ4_ARALY6.688e-3273.40Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8W109_ARATH1.141e-3172.34AT5g55600/MDF20_4 OS=Arabidopsis thaliana GN=At5g5... [more]
Q0WQ11_ARATH1.141e-3172.34Putative uncharacterized protein At5g55600 OS=Arab... [more]
Q69J34_ORYSJ1.595e-2565.63Putative agenet domain-containing protein / bromo-... [more]
Q69J33_ORYSJ1.595e-2565.63Agenet domain-containing protein / bromo-adjacent ... [more]
A2YNJ7_ORYSI1.595e-2565.63Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT622428 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G55600.37.759e-3472.34| Symbols: | agenet domain-containing protein / b... [more]
AT5G55600.27.759e-3472.34| Symbols: | agenet domain-containing protein / b... [more]
AT5G55600.17.759e-3472.34| Symbols: | agenet domain-containing protein / b... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT622428 ID=GT622428; Name=GT622428; organism=Lens culinaris; type=EST; length=689bp
GTGTGGATTTGGATATTTCGAGAGGATCTTCTATTTTTGCATAGGATCTT
CTCTCTCTTGTGAGGCTTTTGAGATTGAGAAAAAAAAGGTCAATTTTTAA
TTTTTGAGATTTTATTTTTATTTATTTATTTTTGTTAAATATCATTTGGA
AAGGTATATATATGTGTGTGTAATTAAGGTTCTAGATTGTACTGTGATTT
TGAGGGTTCTGGTTAGATTTATGTTGTAAGCATCTTTTTATTTTTCTGAG
TAACTCTTCTTAGGTTTAAGGTTGCCTAGAGGGTTATTTGTTTGTCATGA
TGATGTTATGTTAGATGGTCTGGATTGGACCCTATATCTGTTTTTGGTAT
TCTCTTCAAAATGATGGTAGATGGTTCGTGTTTTGTTGAATGGAAAGAAC
AATTTGTTTCACAAGAGCGCGGCCACCGTGTGGTTCACTATTACCTAAAG
GATTCTGCTGGAGAATCATTCCTTGCAGTTGTTGGCACTGAGAGGAGTGT
TAGACACATGTGCTATGTTATTGCTGAGGATTTTCTTGAAATCTGTGGAA
TGGAGGGTTTGTTTCCACCAGGTTTTAAATGGAGATCTAGAAGAGAGGTG
GTCGATTGGCTGACGTCGATGTTATCAAAGAAGCATCTACAGAGTGATAG
AAGTGTAAGGCCTGCTCAAAATTTGGAACTAGCTCATGA
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