GT622709

EST Overview
NameGT622709
Unique NameGT622709
TypeEST
OrganismLens culinaris (lentil)
Sequence length759
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT622709 vs. TrEMBL
Match: B9MY25_POPTR (Bromodomain protein OS=Populus trichocarpa GN=BRD911 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 6.580e-66
Identity = 138/250 (55.20%), Postives = 168/250 (67.20%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDTVHAA-----ESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDG---DLLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETXXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QDIDLIV+NAK YNGDDYNG RIVSR  ELRD VHGMLSQMDPALV +CDKI +QGGPV +P++LG S FP+TPVVQLGT TRTSARLR+VQP+VN+DQ YE LKR KK  D   AA     +S+ QDS+  K  +E   A D + +R   ++ D    +  G   +   +GS   D+TM + E S  V+ VK+ FV+R+E Y IP LERLYTRIMKG+FET                FL+KF E+ ANF
Sbjct:  909 QDIDLIVTNAKVYNGDDYNGARIVSRGYELRDAVHGMLSQMDPALVTYCDKIAAQGGPVQIPDDLGGSIFPSTPVVQLGTVTRTSARLRNVQPDVNLDQSYEALKRQKKNADATCAASTAEDKSRHQDSVQAKLPEEA-GADDMNPDRPESSSADDSRHETSGGEASGHTEGSGSQDVTMSEAEVSSHVDYVKRLFVERTENYGIPLLERLYTRIMKGIFETKDKGVEDDGPRYSILRFLVKFAENTANF 1157          
BLAST of GT622709 vs. TrEMBL
Match: B9HH62_POPTR (Bromodomain protein OS=Populus trichocarpa GN=BRD906 PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.466e-65
Identity = 141/250 (56.40%), Postives = 169/250 (67.60%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDTVHAA-----ESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDG---DLLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETXXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QDIDLIV+NAK YNGDDYNG RIVSR+ ELRD VHGMLSQMDPALV +CDKI +QGGPV +P++LG S FP+TPVVQLG TTRTSARLR+VQP+VN+DQ YE LKR KK  D  HAA     +S+ QDS+  K   E+H A D + +R   ++ D    +  G   +   +GS   D TM D E S   E +K+  V+R+E Y IPQLERLYTRIMKG+FET                FL+KF ED ANF
Sbjct:  973 QDIDLIVTNAKVYNGDDYNGARIVSRSYELRDAVHGMLSQMDPALVTYCDKIAAQGGPVQVPDDLGGSIFPSTPVVQLG-TTRTSARLRNVQPDVNLDQSYEALKRQKKNADATHAASTAEDKSRHQDSVQAK-LPEEHDADDMNPDRPESSSADDIQHETSGGEASGHIEGSGSQDATMSDAEASSHGEYIKRLLVERTENYDIPQLERLYTRIMKGIFET-KDKGYEDGPRYSILRFLVKFAEDAANF 1219          
BLAST of GT622709 vs. TrEMBL
Match: B9T479_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0068780 PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 5.570e-65
Identity = 137/250 (54.80%), Postives = 175/250 (70.00%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDTVHA---AESKSQDSIPVKSSQ--EQHQAHDEDSERTGPAAIDG---DLLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETXXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QD DLIV+NAK YNGDDYNG RIVSRA ELRD VHGMLSQMDPALVAFCDKI +QGGP+H+P++LG S FP+TPVVQLG  TR SARLR+VQPEVN+DQ YE LKR KK  D  HA   AE KS++  P ++++  E+   +D + E+   ++ +G   +  G  +++ A+GS   D+TM D E S  VE +K+ F++R+E Y IP+LERLYTRIMK +FE+                 L+KF ED+ANF
Sbjct:  907 QDFDLIVTNAKVYNGDDYNGARIVSRAYELRDAVHGMLSQMDPALVAFCDKIVAQGGPLHVPDDLGGSIFPSTPVVQLGAVTRASARLRNVQPEVNLDQSYEALKRQKKNIDVAHAASTAEDKSRNIDPAQAAKPSEEPGTNDINFEKPESSSANGNQHETSGEASSD-AEGSGSQDVTMLDAEMSSHVEYIKRLFIERTENYGIPELERLYTRIMKAIFES--KDTVEDDPKYSILKVLVKFAEDEANF 1153          
BLAST of GT622709 vs. TrEMBL
Match: B9MY21_POPTR (Bromodomain protein OS=Populus trichocarpa GN=BRAT905 PE=4 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 2.117e-64
Identity = 136/250 (54.40%), Postives = 167/250 (66.80%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDTVHAA-----ESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDG---DLLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETXXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QDIDLIV+NAK YNGDDYNG RIVSR  ELRD VHGMLSQMDPALV +CDKI +QGGPV +P++LG S FP+TPVVQLGT TRTSARLR+VQP+VN+DQ YE LKR KK  D  HAA     +S+ QDS+  K  +E   A D + +R   ++ D    +  G   +   +GS   D+TM + E S  V+  ++ FV+R+E Y IP LERLYTR MKG+FET                FL+KF E+ ANF
Sbjct:   52 QDIDLIVTNAKVYNGDDYNGARIVSRGYELRDAVHGMLSQMDPALVTYCDKIAAQGGPVQIPDDLGGSIFPSTPVVQLGTVTRTSARLRNVQPDVNLDQSYEALKRQKKNADAAHAASTAEDKSRHQDSVQAKLPEEA-GADDMNPDRPESSSADDSRHETSGGEASGHTEGSGSQDVTMSEAEVSSHVDYFRRLFVERTENYGIPLLERLYTRTMKGIFET-KNKGVEDGRRYSILRFLVKFAENTANF 299          
BLAST of GT622709 vs. TrEMBL
Match: B9MY22_POPTR (Bromodomain protein OS=Populus trichocarpa GN=BRAT903 PE=4 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.764e-64
Identity = 136/250 (54.40%), Postives = 168/250 (67.20%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDTVHAA-----ESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDG---DLLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETXXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QDIDLIV+NAK YNGDDYNG RIVSR  ELRD VHGMLSQMDPALV +CDKI +QGGPV +P++LG S FP+TPVVQLGT TRTSARLR+VQP+VN+DQ YE LKR KK  D   AA     +S+ QDS+  K  +E   A D + +R   ++ D    +  G   +   +GS   D+TM + E S  V+ +K+ FV+R+E Y +P LERLYTRIMKG+FET                FL+KF E+ ANF
Sbjct:   49 QDIDLIVTNAKVYNGDDYNGARIVSRGYELRDAVHGMLSQMDPALVTYCDKIAAQGGPVQIPDDLGGSIFPSTPVVQLGTVTRTSARLRNVQPDVNLDQSYEALKRQKKNADATCAASTAEDKSRHQDSVQAKPPEEA-GADDMNPDRPESSSADDSRHETSGGEASGHTEGSGSQDVTMSEAEVSSHVDYIKRLFVERTENYGMPLLERLYTRIMKGIFET-MDKGVEDGPRYSILRFLVKFAENTANF 296          
BLAST of GT622709 vs. TrEMBL
Match: D7U1N8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_102.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010750001 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.050e-63
Identity = 141/252 (55.95%), Postives = 167/252 (66.27%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGD---TVHAAESK--SQDSIPVKSSQEQ--HQAHDEDSERTGPAAIDG---DLLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETXXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QDIDLIV+NAKAYNGDDYNG RIVSRA ELRD V+GMLSQMDPALVAFC+KI +QGGP H+P+ELG S F  TPVVQ+ T TR SARLR+VQPEVN+DQ YE LKR KK  D   +V  AE K   Q++ P KSSQE   ++A+D   E+   +  D    +     + + +      D+ M D E   Q+ESVK  FV+R+E Y IPQLERLYTRIMKGVFE                 FLLKF  D+ANF
Sbjct:  855 QDIDLIVNNAKAYNGDDYNGARIVSRAYELRDAVYGMLSQMDPALVAFCEKIAAQGGPAHMPDELGGSVFTPTPVVQMATVTRASARLRNVQPEVNLDQSYEALKRPKKNVDAAPSVSTAEDKPRQQEAAPSKSSQENEANEANDASPEQPECSLADNHRPETSQEASGHTSASGSQEDVIMSDVEILSQMESVKLLFVERTENYGIPQLERLYTRIMKGVFEA-KDGGVGEDPKPSILKFLLKFANDEANF 1105          
BLAST of GT622709 vs. TrEMBL
Match: B9MY20_POPTR (Putative uncharacterized protein BRAT904 OS=Populus trichocarpa GN=BRAT904 PE=4 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.244e-56
Identity = 132/302 (43.71%), Postives = 160/302 (52.98%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDTVHA------------------------------------------AESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDGDLL------------------GSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETXXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QDIDLIV+NAK YNGDDYNG RIVSR  ELRD VHGMLSQMDPALV +CDKI +QGGPV +P++LG S FP+TPVVQLGT TRTSARLR+VQP+VN+DQ YE LKR KK  D  HA                                          A++   D     S+ E    H +  +   P     D +                  G   +   +GS   D+TM + E S  V+  ++ FV+R+E Y IP LERLYTR MKG+FET                FL+KF E+ ANF
Sbjct:   59 QDIDLIVTNAKVYNGDDYNGARIVSRGYELRDAVHGMLSQMDPALVTYCDKIAAQGGPVQIPDDLGGSIFPSTPVVQLGTVTRTSARLRNVQPDVNLDQSYEALKRQKKNADAAHAGMFIGKAIYFVLVILLFVFPTYLKDVLKHVKLQDTFYMLNFGADTDVIDQYVATSTAEDKSRHQDSVQAKLPEEAGADDMNPDRPESSSADDSRHETSGGEASGHTEGSGSQDVTMSEAEVSSHVDYFRRLFVERTENYGIPLLERLYTRTMKGIFET-KNKGVEDGRRYSILRFLVKFAENTANF 359          
BLAST of GT622709 vs. TrEMBL
Match: D7KF92_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470606 PE=4 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.287e-53
Identity = 126/255 (49.41%), Postives = 155/255 (60.78%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDTV--HAAESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDGD---------LLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFET--XXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QD+DLIV NAKAYNGDDY G RIVSRA ELRD VHGMLSQMDPAL+ +CDKI ++GGP  +P++L  S     PVVQ+GT TRTSARLR+VQPEVN+D+ YE LK+ KK  D V   +A  KSQ+     +S+E       +++   P+  DGD            S  +   D SR  D    D E S Q ESVK   ++R++ YSIPQ+ERLYTRIMKGV ET                  FL +F +  ANF
Sbjct:  959 QDVDLIVRNAKAYNGDDYAGARIVSRAYELRDVVHGMLSQMDPALLTYCDKIAAEGGPSQIPDDLSGSILGLAPVVQMGTVTRTSARLRNVQPEVNLDRDYEGLKKPKKTTDAVCTDSAADKSQNQ---DASKEMPSPEAANTQSAVPSPTDGDREDRSEPPSKEASAEDVSGDSSR--DFAKSDEEISSQTESVKGLLMERTDNYSIPQMERLYTRIMKGVLETLDKGLRDDDNNPKHSILRFLSEFAQHQANF 1208          
BLAST of GT622709 vs. TrEMBL
Match: Q9MA34_ARATH (T20M3.19 protein OS=Arabidopsis thaliana GN=T20M3.19 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.423e-52
Identity = 122/254 (48.03%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGD--TVHAAESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDGD--------LLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFET--XXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QD+DLIV NAKAYNGDDY G RIVSRA ELRD VHGMLSQMDPAL+ +CDKI ++GGP  +P++L  S     PVVQ+GT TRTSARLR+VQPEVN+D+ YE LK+ KK  D  ++ +A  KSQ+     S QE       + +   P+  DGD           +   +++  S        D E S + ESVK  F++R++ YSIPQ+ERLYTRIMKGV ET                  FL +F +  ANF
Sbjct: 1001 QDVDLIVRNAKAYNGDDYAGARIVSRAYELRDVVHGMLSQMDPALLTYCDKIAAEGGPSLIPDDLSGSILGLAPVVQMGTVTRTSARLRNVQPEVNLDRDYEGLKKPKKTTDAVSIDSAADKSQNQ---DSGQEMPSPDAANPQSAAPSPTDGDREDQSEPPSKEASAEDMSGDSCKGPAAKSDKEISSRTESVKGVFMERTDNYSIPQMERLYTRIMKGVLETLDKGLRDDDNNPKHSILRFLSEFAQHQANF 1251          
BLAST of GT622709 vs. TrEMBL
Match: Q93ZM5_ARATH (At1g05910/T20M3_16 OS=Arabidopsis thaliana GN=At1g05910 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.423e-52
Identity = 122/254 (48.03%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGD--TVHAAESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDGD--------LLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFET--XXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QD+DLIV NAKAYNGDDY G RIVSRA ELRD VHGMLSQMDPAL+ +CDKI ++GGP  +P++L  S     PVVQ+GT TRTSARLR+VQPEVN+D+ YE LK+ KK  D  ++ +A  KSQ+     S QE       + +   P+  DGD           +   +++  S        D E S + ESVK  F++R++ YSIPQ+ERLYTRIMKGV ET                  FL +F +  ANF
Sbjct:  960 QDVDLIVRNAKAYNGDDYAGARIVSRAYELRDVVHGMLSQMDPALLTYCDKIAAEGGPSLIPDDLSGSILGLAPVVQMGTVTRTSARLRNVQPEVNLDRDYEGLKKPKKTTDAVSIDSAADKSQNQ---DSGQEMPSPDAANPQSAAPSPTDGDREDQSEPPSKEASAEDMSGDSCKGPAAKSDKEISSRTESVKGVFMERTDNYSIPQMERLYTRIMKGVLETLDKGLRDDDNNPKHSILRFLSEFAQHQANF 1210          
BLAST of GT622709 vs. TAIR peptide
Match: AT1G05910.1 (| Symbols: | cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210)

HSP 1 Score: 210.305 bits (534), Expect = 9.333e-55
Identity = 122/254 (48.03%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 QDIDLIVSNAKAYNGDDYNGTRIVSRACELRDKVHGMLSQMDPALVAFCDKIGSQGGPVHLPEELGDSTFPATPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGD--TVHAAESKSQDSIPVKSSQEQHQAHDEDSERTGPAAIDGD--------LLGSCTNNIADGSRLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFET--XXXXXXXXXXXXXXXXFLLKFVEDDANF 726
            QD+DLIV NAKAYNGDDY G RIVSRA ELRD VHGMLSQMDPAL+ +CDKI ++GGP  +P++L  S     PVVQ+GT TRTSARLR+VQPEVN+D+ YE LK+ KK  D  ++ +A  KSQ+     S QE       + +   P+  DGD           +   +++  S        D E S + ESVK  F++R++ YSIPQ+ERLYTRIMKGV ET                  FL +F +  ANF
Sbjct:  960 QDVDLIVRNAKAYNGDDYAGARIVSRAYELRDVVHGMLSQMDPALLTYCDKIAAEGGPSLIPDDLSGSILGLAPVVQMGTVTRTSARLRNVQPEVNLDRDYEGLKKPKKTTDAVSIDSAADKSQNQ---DSGQEMPSPDAANPQSAAPSPTDGDREDQSEPPSKEASAEDMSGDSCKGPAAKSDKEISSRTESVKGVFMERTDNYSIPQMERLYTRIMKGVLETLDKGLRDDDNNPKHSILRFLSEFAQHQANF 1210          
The following BLAST results are available for this feature:
BLAST of GT622709 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9MY25_POPTR6.580e-6655.20Bromodomain protein OS=Populus trichocarpa GN=BRD9... [more]
B9HH62_POPTR1.466e-6556.40Bromodomain protein OS=Populus trichocarpa GN=BRD9... [more]
B9T479_RICCO5.570e-6554.80ATP binding protein, putative OS=Ricinus communis ... [more]
B9MY21_POPTR2.117e-6454.40Bromodomain protein OS=Populus trichocarpa GN=BRAT... [more]
B9MY22_POPTR2.764e-6454.40Bromodomain protein OS=Populus trichocarpa GN=BRAT... [more]
D7U1N8_VITVI1.050e-6355.95Whole genome shotgun sequence of line PN40024, sca... [more]
B9MY20_POPTR1.244e-5643.71Putative uncharacterized protein BRAT904 OS=Populu... [more]
D7KF92_ARALY1.287e-5349.41Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9MA34_ARATH1.423e-5248.03T20M3.19 protein OS=Arabidopsis thaliana GN=T20M3.... [more]
Q93ZM5_ARATH1.423e-5248.03At1g05910/T20M3_16 OS=Arabidopsis thaliana GN=At1g... [more]
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BLAST of GT622709 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G05910.19.333e-5548.03| Symbols: | cell division cycle protein 48-relat... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 1..54
score: 1.6
NoneNo IPR availablePANTHERPTHR23069TAT-BINDING HOMOLOG 7coord: 1..138
score: 2.2
NoneNo IPR availableSEGsegsegcoord: 215..230
score
NoneNo IPR availableSEGsegsegcoord: 54..63
score
NoneNo IPR availableSEGsegsegcoord: 39..50
score
NoneNo IPR availableSEGsegsegcoord: 43..54
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT622709 ID=GT622709; Name=GT622709; organism=Lens culinaris; type=EST; length=759bp
CAGGACATTGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGATGA
CTACAATGGCACTAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATAAGG
TGCATGGGATGCTCTCTCAAATGGATCCAGCACTGGTTGCATTTTGTGAC
AAGATTGGTAGCCAAGGTGGCCCAGTTCATTTACCTGAGGAATTAGGGGA
TTCTACATTCCCTGCTACTCCTGTTGTACAGCTGGGTACCACTACTAGAA
CGAGTGCTCGACTTCGTCATGTCCAACCAGAGGTTAACATGGATCAGGGT
TATGAAGTATTGAAGCGGACTAAGAAGATCGGTGATACTGTACATGCAGC
AGAAAGTAAATCACAAGATTCAATACCAGTAAAGTCTTCCCAGGAGCAGC
ATCAGGCACACGACGAGGATTCTGAAAGAACGGGACCTGCAGCAATTGAT
GGAGATTTGCTTGGATCTTGTACAAATAACATTGCTGATGGTAGCAGGCT
TCACGATATCACAATGCAAGATGGTGAATTTTCAAGACAGGTTGAGTCTG
TTAAGCAGCATTTCGTTAAGCGTAGTGAAAAATACAGCATCCCACAACTT
GAAAGGCTTTACACAAGAATCATGAAGGGTGTGTTTGAAACTAAAGATAA
AGGATTGAATGATGATGACCTCAAGAATTTGGTTTTGGGGTTTTTGTTGA
AATTTGTAGAGGATGATGCGAATTTCTGACAACTGAGTTTTCCCTTATCC
TTCCGTGAT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain