GT623401

EST Overview
NameGT623401
Unique NameGT623401
TypeEST
OrganismLens culinaris (lentil)
Sequence length731
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT623401 vs. TrEMBL
Match: D7U9K6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_62.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031632001 PE=4 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 3.020e-81
Identity = 147/243 (60.49%), Postives = 187/243 (76.95%), Query Frame = 1
Query:    1 RKLSDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            R+ +DWKAA A+ +   +Y GR+E  N GGLL+RFYS++GFLPFPQLSP ++ +EPHK I+++A    GS++S+ V+L DEEK+ L+FSEK A+W K+SK +N+GD+F+A V  V D+GAFV+LRFPDGLYHL+GL+HVSEVSWDL+ DVRD+L   DEV+VKI+ V+ VK R   SIKQLE+DPLLETLDKVIPQD               IEPL GL+TI EELLQE+GI + RISRQGFE
Sbjct:   90 RRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQDGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFE 332          
BLAST of GT623401 vs. TrEMBL
Match: A5BZI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006784 PE=4 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.112e-75
Identity = 146/271 (53.87%), Postives = 188/271 (69.37%), Query Frame = 1
Query:    1 RKLSDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPD----------GLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAV------------------XXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            R+ +DWKAA A+ +   +Y GR+E  N GGLL+RFYS++GFLPFPQLSP ++ +EPHK I+++A    GS++S+ V+L DEEK+ L+FSEK A+W K+SK +N+GD+F+A V  V D+GAFV+LRFPD          GLYHL+GL+HVSEVSWDL+ DVRD+L   DEV+VKI+ V+ VK R   SIKQLE+DPLLETLDKVIPQ +  +                             IEPL GL+TI EELLQE+GI + RISRQGFE
Sbjct:   90 RRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGTSFSVTYITGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQIIFLLHRTKSSDVSHLLQDGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFE 360          
BLAST of GT623401 vs. TrEMBL
Match: B9IAB2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_246437 PE=4 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.962e-72
Identity = 136/241 (56.43%), Postives = 176/241 (73.03%), Query Frame = 1
Query:   10 SDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDG-LYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            +DWKA  AY DG  +  GRVE  N GGL++RFYS++GFLPFP LSP ++ ++P K I ++A + TG ++S+ V+  +EE + L+FSEK A W K+SK +N+G++F  RV  V D+GAF+++RFPDG LYHL+GL+HVSEVSWDL+ DVRDIL V DEV VKII ++  K R   SIKQLE+DPLLETLDKVIPQD               IEPL GL++I +EL +EDGI + RISRQGFE
Sbjct:    1 ADWKAVKAYYDGGHILQGRVEGFNGGGLIVRFYSLVGFLPFPLLSPSHSCKDPQKTIHEIAKDLTGLLISVKVIHAEEENRKLIFSEKEAVWSKFSKGINVGEIFAGRVGSVEDYGAFIHMRFPDGSLYHLTGLVHVSEVSWDLVQDVRDILNVGDEVTVKIIDIDQGKSRITLSIKQLEEDPLLETLDKVIPQDGSIAPDPLSMHNSITIEPLPGLESIFQELTREDGIDDIRISRQGFE 241          
BLAST of GT623401 vs. TrEMBL
Match: Q9LK47_ARATH (AT3g23700/MYM9_3 OS=Arabidopsis thaliana GN=At3g23700 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.316e-68
Identity = 134/240 (55.83%), Postives = 167/240 (69.58%), Query Frame = 1
Query:   10 SDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            SDWK A AY      + G V+  N GGLLIRF+S++GFLP+PQLSP  + +EP K I ++A    GS L + V+  DEE + L+ SEK A W KYS+ VN+GDVF+ RV  V D+GAF++LRF DGLYHL+GL+HVSEVSWD + DVRD+LR  DEV+V +  ++  K R   SIKQLEDDPLLETLDKVI +D               IEPL GL+TILEELL+EDGI   +I+RQGFE
Sbjct:   95 SDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDPLLETLDKVILKDSSTGSPSLSSNNGDTIEPLPGLETILEELLKEDGIEAVKINRQGFE 334          
BLAST of GT623401 vs. TrEMBL
Match: D7L3G2_ARALY (S1 RNA-binding domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479886 PE=4 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.932e-68
Identity = 134/240 (55.83%), Postives = 167/240 (69.58%), Query Frame = 1
Query:   10 SDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            SDWK A AY      + G VE  N GGLLIRF+S++GFLP+PQLSP  + +EP K I ++A    GS L + V+  DEE + L+ SEK A W KYS+ V++GDVF  RV  V D+GAF++LRF DGLYHL+GL+HVSEVSWD + DVRD+LR  DEV+V +  ++  K R   SIKQLEDDPLLETLDKVI +D  +            IEPL GL+TILEELL+EDGI   +I+RQGFE
Sbjct:   95 SDWKTAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVSVGDVFTGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDPLLETLDKVILKDSSSGSPSLSSNNGDTIEPLPGLETILEELLKEDGIEAVKINRQGFE 334          
BLAST of GT623401 vs. TrEMBL
Match: A9NXR9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.593e-58
Identity = 119/243 (48.97%), Postives = 158/243 (65.02%), Query Frame = 1
Query:    1 RKLSDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            R   DWK A  Y+    +  G+V+  NSGG+L+RF+S+ GFLP+ Q+SP    ++  K I + A +  GS LSL V+ V EE+  L+FSEK A W K+S  +N GDVF+ RV  V  FGAFVNLRFPDG Y++ GL+H+SEVSWDL+ DVRDIL+  D+V+VK+I +N  K R   SIKQL+ DPL ETLD ++PQ+                EPL  L+ I +ELLQE+GI + +I RQ  E
Sbjct:   83 RSAVDWKKAETYKGNGEIVEGKVDGSNSGGVLVRFHSLQGFLPYSQMSPSLLLKDRSKTISESAKDLIGSTLSLKVIEVSEEENMLIFSEKQAMWEKFS--INEGDVFEGRVSSVTKFGAFVNLRFPDGGYYVDGLVHISEVSWDLVRDVRDILKKGDDVRVKVIQINVEKSRLAFSIKQLQADPLFETLDTLMPQEDTLNLGTSTADGVVPSEPLPDLEQICKELLQEEGITDVKIGRQVLE 323          
BLAST of GT623401 vs. TrEMBL
Match: C5WSY9_SORBI (Putative uncharacterized protein Sb01g001480 OS=Sorghum bicolor GN=Sb01g001480 PE=4 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.188e-57
Identity = 115/239 (48.12%), Postives = 157/239 (65.69%), Query Frame = 1
Query:   13 DWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            DW+AA  Y+D   +    V   NSGGL++RF S+ GF+P P LSP +   +P + I+D+  +  G+ +S+ V  V+EE++ LVFSEK ASW  YS  + +GD++D  V  V  +GAFV+LRFPDGLYHL+GL+H+SEVSWDL+ DV+D L   D VKV ++ +++ K R   SI+QLE+DPLLETLDKVIP +  A           ++E L GL  I  ELLQEDGI + +  RQ  E
Sbjct:   72 DWEAARTYKDQGNILTLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCEDPKRPIQDITKDLVGTSISVKVAEVNEEERKLVFSEKDASWSTYSSLIKIGDIYDGIVGSVFPYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVQDFLNEGDAVKVIVVNIDTAKSRIALSIRQLEEDPLLETLDKVIPLE--ADQSPDRMMSPSEVELLPGLDGICNELLQEDGITDVQFGRQASE 308          
BLAST of GT623401 vs. TrEMBL
Match: B4F9P4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.188e-57
Identity = 114/240 (47.50%), Postives = 160/240 (66.67%), Query Frame = 1
Query:   10 SDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            +DW++A A +D   +++  V   NSGGL++RF S+ GF+P P LSP +  ++P + I+D+  +  G+ +S+ V  V+EE++ LVFSEK ASW  YS  + +GD++D  V  V  +GAFV+LRFPDGLYHL+GL+H+SEVSWDL+ DV+D L   D VKV ++ ++  K R   SI+QLE+DPLLETLDKVIP +  A           ++E L GL  I  ELLQEDGI + +  RQ  E
Sbjct:   71 ADWESARACKDQGRIFSLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDVTKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVGSVFHYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVKDFLNEGDAVKVIVVNIDMTKSRIALSIRQLEEDPLLETLDKVIPLE--ADQSPNRMMSPSEVELLPGLDGICNELLQEDGITDVQFGRQALE 308          
BLAST of GT623401 vs. TrEMBL
Match: B6TZ31_MAIZE (RNA binding S1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.850e-57
Identity = 114/240 (47.50%), Postives = 159/240 (66.25%), Query Frame = 1
Query:   10 SDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            +DW++A A +D   ++   V   NSGGL++RF S+ GF+P P LSP +  ++P + I+D+  +  G+ +S+ V  V+EE++ LVFSEK ASW  YS  + +GD++D  V  V  +GAFV+LRFPDGLYHL+GL+H+SEVSWDL+ DV+D L   D VKV ++ ++  K R   SI+QLE+DPLLETLDKVIP  + A           ++E L GL  I  ELLQEDGI + +  RQ  E
Sbjct:   71 ADWESARACKDQGRIFTLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDVTKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVGSVFHYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVKDFLNEGDAVKVIVVNIDMTKSRIALSIRQLEEDPLLETLDKVIP--LKADQSPNRMISPSEVELLPGLDGICNELLQEDGITDVQFGRQALE 308          
BLAST of GT623401 vs. TrEMBL
Match: C0PNM2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.847e-55
Identity = 114/244 (46.72%), Postives = 160/244 (65.57%), Query Frame = 1
Query:   10 SDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAR----EPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            +DW++A A +D   +++  V   NSGGL++RF S+ GF+P P LSP +  +    +P + I+D+  +  G+ +S+ V  V+EE++ LVFSEK ASW  YS  + +GD++D  V  V  +GAFV+LRFPDGLYHL+GL+H+SEVSWDL+ DV+D L   D VKV ++ ++  K R   SI+QLE+DPLLETLDKVIP +  A           ++E L GL  I  ELLQEDGI + +  RQ  E
Sbjct:   71 ADWESARACKDQGRIFSLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCKAKLADPKRPIQDVTKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVGSVFHYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVKDFLNEGDAVKVIVVNIDMTKSRIALSIRQLEEDPLLETLDKVIPLE--ADQSPNRMMSPSEVELLPGLDGICNELLQEDGITDVQFGRQALE 312          
BLAST of GT623401 vs. SwissProt
Match: RS1_SYNP6 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 2.107e-15
Identity = 54/163 (33.13%), Postives = 81/163 (49.69%), Query Frame = 1
Query:   67 VEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            V A N GG L+R   + GF+P   +S            R    +  G  L L  L VDE++  LV S + A   +    + +G+V    V G+  +GAF+++        +SGL+H+SE+S D I     +  V DEVKV II +++ + R   S KQLE +P
Sbjct:  126 VFATNRGGALVRIEGLRGFIPGSHIST-----------RKAKEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGIKPYGAFIDIG------GVSGLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRISLSTKQLEPEP 271          
BLAST of GT623401 vs. SwissProt
Match: RS1A_SYNY3 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803) GN=rps1A PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.005e-15
Identity = 53/163 (32.52%), Postives = 80/163 (49.08%), Query Frame = 1
Query:   67 VEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            V A N GG L+R   + GF+P   +S            R+   +  G  L L  L VDEE+  LV S + A   +    + +  V    V G+  +GAF+++        +SGL+H+SE+S D I     +  V DE+KV II +++ + R   S KQLE +P
Sbjct:  125 VFATNRGGALVRIEGLRGFIPGSHISA-----------REAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSVRGIKPYGAFIDIG------GVSGLLHISEISHDHIDTPHSVFNVNDEIKVMIIDLDAERGRISLSTKQLEPEP 270          
BLAST of GT623401 vs. SwissProt
Match: RS1_BUCBP (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=rpsA PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.363e-13
Identity = 57/185 (30.81%), Postives = 91/185 (49.19%), Query Frame = 1
Query:   31 AYRDGKL---LYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNL-------GDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            AY+D K    L NG+V+    GG  +    I  FLP   L  +   RE   H+        G  L   V+ +D+++ N+V S +A    +Y+   NL       G +    V  + D+GAFV+L   DGL      +H+++++W  +    +I+ + DEVK+KI+  +  K+R    +KQL DDP
Sbjct:  101 AYKDSKTVVGLINGKVK----GGFTVELEDIRAFLP-GSLVDIRPVRET-MHLE-------GKELEFKVIKLDQKRNNVVVSRRAVIESEYNAERNLLLETLQEGLIVSGIVKNLTDYGAFVDLGGVDGL------LHITDMAWKRVKHPSEIVNIGDEVKIKILKFDREKIRVSLGLKQLSDDP 266          

HSP 2 Score: 57.7658 bits (138), Expect = 7.257e-8
Identity = 34/133 (25.56%), Postives = 68/133 (51.13%), Query Frame = 1
Query:  169 HKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAAS---WHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLI-HDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            +K+I      +  S++ +++L +DEE++ +    K      W ++SK  N G     ++  + DFG F+ L        + GL+H+S++SW++   +     +  +EV   ++ V+  + R    IKQL++DP
Sbjct:  313 NKNIHPSKMVQVNSVVKVMILDIDEERRRISLGLKQCKNNPWMEFSKKYNKGSHVVGKIKSITDFGIFIGLE-----GSIDGLVHLSDISWNISGEESVKKYKKGEEVLAVVLQVDPDRERISLGIKQLQEDP 440          
BLAST of GT623401 vs. SwissProt
Match: RS1_LEULA (40S ribosomal protein S1 OS=Leuconostoc lactis GN=rps1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.669e-12
Identity = 60/222 (27.03%), Postives = 106/222 (47.75%), Query Frame = 1
Query:   28 IAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHK--------YSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTIL 669
            +++ +G  +    + AV  GGL++    + GF+P        A+    + + DL N+     +   V+ +D     L+ S KA +  +        +SK +++G+V +  V  + DFGAFV+L   DGL      +HVSE+S D + +  D+L   D+V VKI+ +++ K R   SIK  +  P  E  D++    VL             +E L G++ ++
Sbjct:  139 LSFAEGDTVDAKVINAVR-GGLIVDVNGVRGFVP--------ASMVAERFVSDL-NQFKNKDIKAQVIEIDPANARLILSRKAVAAQELAAQLAEVFSK-LSVGEVVEGTVARLTDFGAFVDLGGVDGL------VHVSEISHDRVKNPADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDFGAFVEILPGIEGLV 343          

HSP 2 Score: 65.4698 bits (158), Expect = 3.481e-10
Identity = 41/133 (30.83%), Postives = 71/133 (53.38%), Query Frame = 1
Query:  169 HKHIRDLANERT-GSILSLLVLLVDEEKQNLVFSEKAAS---WHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            H  +++ A+  T G  + + +L +D EK  +  S KA     W + +  +  G V +  V  V DFGAFV +     L  + GL+HVS++S   I +  ++L+  D+V+VK++ +   + R   S+K LE+ P
Sbjct:  264 HDRVKNPADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDFGAFVEI-----LPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEERISLSMKALEEKP 391          
BLAST of GT623401 vs. SwissProt
Match: RS1H_BACSU (30S ribosomal protein S1 homolog OS=Bacillus subtilis GN=ypfD PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.180e-12
Identity = 56/191 (29.32%), Postives = 91/191 (47.64%), Query Frame = 1
Query:   46 KLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFS-------EKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVL 597
            K ++   V+ V  GGL++    + GF+P         A     H  +   +  G  LSLLV+ +D +K  ++ S       E+A    +  + + +G V D +V  + DFGAFV++   DGL      +H+S++S   +    D++    EVKVK++ V+    R   SIK     P  +  +KV P DVL
Sbjct:  102 KEVFEAEVKDVVKGGLVVDI-GVRGFIP---------ASLVEAHFVEDFTDYKGKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGKVQRLTDFGAFVDIGGIDGL------VHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVL 276          

HSP 2 Score: 65.855 bits (159), Expect = 2.665e-10
Identity = 50/178 (28.09%), Postives = 84/178 (47.19%), Query Frame = 1
Query:   58 NGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIR---DLANERTGSILSLLVLLVDEEKQNLVFSEK---AASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLD 573
            +G+V+ +   G  +    I G +   QLS        H H+    D+  E  G  + + VL VD + + +  S K      W++  + V  GDV +  V  +  FGAFV +     L  + GL+H+S++S   I    ++L     VKVK++ VN  + R   S+++LE+ P  +  D
Sbjct:  192 DGKVQRLTDFGAFVDIGGIDGLVHISQLS--------HSHVEKPSDVVEE--GQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEI-----LPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKADQED 354          
BLAST of GT623401 vs. SwissProt
Match: RR1_SPIOL (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.082e-11
Identity = 49/180 (27.22%), Postives = 88/180 (48.89%), Query Frame = 1
Query:   16 WKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            W+     +   ++  G++   N GG++     + GF+PF Q+S   +A E       L  E     + L  + VDEE+  LV S + A     ++ + +G V    V  +  +GAF+++        ++GL+HVS++S D + D+  +L+  D +KV I+  +  + R   S K+LE  P
Sbjct:  174 WERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEEL------LEKE-----IPLKFVEVDEEQSRLVMSNRKAMADSQAQ-LGIGSVVTGTVQSLKPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 335          
BLAST of GT623401 vs. SwissProt
Match: RS1_MYCTU (30S ribosomal protein S1 OS=Mycobacterium tuberculosis GN=rpsA PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.665e-10
Identity = 54/189 (28.57%), Postives = 92/189 (48.68%), Query Frame = 1
Query:   16 WKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKY------SKYVN---LGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            W    A ++      G V  V  GGL++    + GFLP        A+    + +RDL     G  +   ++ +D+ + N+V S +A  W +       S+++N    G +    V  + +FGAFV+L   DGL      +HVSE+SW  I    ++++V DEV V+++ V+  + R   S+K  ++DP
Sbjct:  113 WGTIEALKEKDEAVKGTVIEVVKGGLILDI-GLRGFLP--------ASLVEMRRVRDL-QPYIGKEIEAKIIELDKNRNNVVLSRRA--WLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGL------VHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDP 283          
BLAST of GT623401 vs. SwissProt
Match: RS1_HAEIN (30S ribosomal protein S1 OS=Haemophilus influenzae GN=rpsA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 3.481e-10
Identity = 39/122 (31.97%), Postives = 66/122 (54.10%), Query Frame = 1
Query:  205 GSILSLLVLLVDEEKQNLVFSEK---AASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHD--VRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            G  + ++VL +DEE++ +    K   A  W +++   N GD    ++  + DFG F+ L        + GL+H+S++SW +  +  VR   +  DEV   ++ V++VK R    IKQLE+DP
Sbjct:  325 GDTVEVMVLEIDEERRRISLGLKQCKANPWTQFADTHNKGDKVTGKIKSITDFGIFIGLEGG-----IDGLVHLSDISWSISGEEAVRQYKK-GDEVSAVVLAVDAVKERISLGIKQLEEDP 440          

HSP 2 Score: 58.151 bits (139), Expect = 5.557e-8
Identity = 47/172 (27.33%), Postives = 77/172 (44.77%), Query Frame = 1
Query:   61 GRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAA-----SWHKYSKYVNL--GDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            G +     GG  +    +  FLP   L     ARE        A+   G  L   V+ +D+++ N+V S +A      S  +     NL  G      V  + ++GAFV+L   DGL      +H+++++W  +    +I+ V DEV VK++  +  + R    +KQL  DP
Sbjct:  110 GLIXGKVKGGFTVELNGVRAFLP-GSLVDTRPARE--------ADHLLGKELEFKVIKLDQKRNNVVVSRRAVIESENSQEREQVLENLVEGSEVKGVVKNLTEYGAFVDLGGVDGL------LHITDMAWKRVKHPSEIVNVGDEVTVKVLKFDKDRTRVSLGLKQLGQDP 266          
BLAST of GT623401 vs. SwissProt
Match: RS1_SHIFL (30S ribosomal protein S1 OS=Shigella flexneri GN=rpsA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.937e-10
Identity = 38/134 (28.36%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  169 HKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEK---AASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHD--VRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            +K+I        G ++ ++VL +DEE++ +    K   A  W ++++  N GD  + ++  + DFG F+ L   DG   + GL+H+S++SW++  +  VR+  +  DE+   ++ V++ + R    +KQL +DP
Sbjct:  313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL---DG--GIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440          

HSP 2 Score: 59.6918 bits (143), Expect = 1.910e-8
Identity = 47/182 (25.82%), Postives = 85/182 (46.70%), Query Frame = 1
Query:   31 AYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAA-----SWHKYSKYVNLGDVFDAR--VCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            AY D + +  G +     GG  +    I  FLP   +          + +RD  +   G  L   V+ +D+++ N+V S +A      S  +     NL +  + +  V  + D+GAFV+L   DGL      +H+++++W  +    +I+ V DE+ VK++  +  + R    +KQL +DP
Sbjct:  101 AYEDAETV-TGVINGKVKGGFTVELNGIRAFLPGSLVDV--------RPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL------LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266          
BLAST of GT623401 vs. SwissProt
Match: RS1_ECOLI (30S ribosomal protein S1 OS=Escherichia coli (strain K12) GN=rpsA PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.937e-10
Identity = 38/134 (28.36%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  169 HKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEK---AASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHD--VRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            +K+I        G ++ ++VL +DEE++ +    K   A  W ++++  N GD  + ++  + DFG F+ L   DG   + GL+H+S++SW++  +  VR+  +  DE+   ++ V++ + R    +KQL +DP
Sbjct:  313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL---DG--GIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440          

HSP 2 Score: 59.6918 bits (143), Expect = 1.910e-8
Identity = 47/182 (25.82%), Postives = 85/182 (46.70%), Query Frame = 1
Query:   31 AYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAA-----SWHKYSKYVNLGDVFDAR--VCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            AY D + +  G +     GG  +    I  FLP   +          + +RD  +   G  L   V+ +D+++ N+V S +A      S  +     NL +  + +  V  + D+GAFV+L   DGL      +H+++++W  +    +I+ V DE+ VK++  +  + R    +KQL +DP
Sbjct:  101 AYEDAETV-TGVINGKVKGGFTVELNGIRAFLPGSLVDV--------RPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL------LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266          
BLAST of GT623401 vs. TAIR peptide
Match: AT3G23700.1 (| Symbols: | Nucleic acid-binding proteins superfamily | chr3:8531689-8533742 REVERSE LENGTH=392)

HSP 1 Score: 263.462 bits (672), Expect = 8.690e-71
Identity = 134/240 (55.83%), Postives = 167/240 (69.58%), Query Frame = 1
Query:   10 SDWKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQDVLAVXXXXXXXXXXQIEPLSGLKTILEELLQEDGIYEARISRQGFE 729
            SDWK A AY      + G V+  N GGLLIRF+S++GFLP+PQLSP  + +EP K I ++A    GS L + V+  DEE + L+ SEK A W KYS+ VN+GDVF+ RV  V D+GAF++LRF DGLYHL+GL+HVSEVSWD + DVRD+LR  DEV+V +  ++  K R   SIKQLEDDPLLETLDKVI +D               IEPL GL+TILEELL+EDGI   +I+RQGFE
Sbjct:   95 SDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDPLLETLDKVILKDSSTGSPSLSSNNGDTIEPLPGLETILEELLKEDGIEAVKINRQGFE 334          
BLAST of GT623401 vs. TAIR peptide
Match: AT5G30510.1 (| Symbols: RPS1, ARRPS1 | ribosomal protein S1 | chr5:11619262-11621223 REVERSE LENGTH=416)

HSP 1 Score: 67.781 bits (164), Expect = 6.999e-12
Identity = 51/180 (28.33%), Postives = 87/180 (48.33%), Query Frame = 1
Query:   16 WKAAIAYRDGKLLYNGRVEAVNSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDP 555
            W+     +   ++   +V   N GGL+     + GF+PF Q+S   AA E       L  E     + L  + VDEE+  LV S + A     ++ + +G V    V  +  +GAF+++        ++GL+HVS++S D + D+  +L+  D +KV I+  +  + R   S K+LE  P
Sbjct:  177 WERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEEL------LEKE-----IPLKFVEVDEEQTKLVLSNRKAVADSQAQ-LGIGSVVLGVVQSLKPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTP 338          
BLAST of GT623401 vs. TAIR peptide
Match: AT1G71720.1 (| Symbols: | Nucleic acid-binding proteins superfamily | chr1:26983744-26985893 FORWARD LENGTH=500)

HSP 1 Score: 57.7658 bits (138), Expect = 7.242e-9
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   79 NSGGLLIRFYSIMGFLPFPQLSPMYAAREPHKHIRDLANERTGSILSLLVLLVDEEKQNLVFSEKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDK 576
            N+GGLL R   +  F+P  +L          K       E  G    + +  ++E+K +L+ SEK A W K   Y+  G + +  V  +  +GA V L    G    SGL+H+S ++   I  V D+L+V + VKV ++  +    +   SI  LE +P L   D+
Sbjct:  294 NTGGLLTRIEGLRAFIPKQELVKKVNTFTELK-------ENVGRRFLVQITRLNEDKNDLILSEKVA-WEKL--YLREGTLLEGTVVKILPYGAQVKL----GDSSRSGLLHISNITRRRIGSVSDVLQVDESVKVLVV-KSLFPDKISLSIADLESEPGLFISDR 444          
BLAST of GT623401 vs. TAIR peptide
Match: AT1G12800.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:4361778-4365189 REVERSE LENGTH=767)

HSP 1 Score: 52.7582 bits (125), Expect = 2.330e-7
Identity = 35/136 (25.74%), Postives = 60/136 (44.12%), Query Frame = 1
Query:  205 GSILSLLVLLVDEEKQNLVFS-------EKAASWHKYSKYVNLGDVFDARVCGVHDFGAFVNLRFPDGLYHLSGLIHVSEVSWDLIHDVRDILRVADEVKVKIIGVNSVKLRFFASIKQLEDDPLLETLDKVIPQD 591
            G  + + V++ +   + L+FS       E+          + +GDV    +  +  FG F  L        +  L+H SEVSWD   D     ++   V+ K+  ++    R F S+K++  DPL E L+ V+  D
Sbjct:  539 GQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELE------GVPALVHQSEVSWDATLDPASYFKIGQIVEAKVHQLDFALERIFLSLKEITPDPLTEALESVVGGD 668          
The following BLAST results are available for this feature:
BLAST of GT623401 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7U9K6_VITVI3.020e-8160.49Whole genome shotgun sequence of line PN40024, sca... [more]
A5BZI0_VITVI1.112e-7553.87Putative uncharacterized protein OS=Vitis vinifera... [more]
B9IAB2_POPTR1.962e-7256.43Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q9LK47_ARATH1.316e-6855.83AT3g23700/MYM9_3 OS=Arabidopsis thaliana GN=At3g23... [more]
D7L3G2_ARALY2.932e-6855.83S1 RNA-binding domain-containing protein OS=Arabid... [more]
A9NXR9_PICSI3.593e-5848.97Putative uncharacterized protein OS=Picea sitchens... [more]
C5WSY9_SORBI5.188e-5748.12Putative uncharacterized protein Sb01g001480 OS=So... [more]
B4F9P4_MAIZE5.188e-5747.50Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6TZ31_MAIZE8.850e-5747.50RNA binding S1 OS=Zea mays PE=2 SV=1[more]
C0PNM2_MAIZE2.847e-5546.72Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GT623401 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RS1_SYNP62.107e-1533.1330S ribosomal protein S1 OS=Synechococcus sp. (str... [more]
RS1A_SYNY38.005e-1532.5230S ribosomal protein S1 homolog A OS=Synechocysti... [more]
RS1_BUCBP3.363e-1330.8130S ribosomal protein S1 OS=Buchnera aphidicola su... [more]
RS1_LEULA1.669e-1227.0340S ribosomal protein S1 OS=Leuconostoc lactis GN=... [more]
RS1H_BACSU2.180e-1229.3230S ribosomal protein S1 homolog OS=Bacillus subti... [more]
RR1_SPIOL1.082e-1127.2230S ribosomal protein S1, chloroplastic OS=Spinaci... [more]
RS1_MYCTU2.665e-1028.5730S ribosomal protein S1 OS=Mycobacterium tubercul... [more]
RS1_HAEIN3.481e-1031.9730S ribosomal protein S1 OS=Haemophilus influenzae... [more]
RS1_SHIFL5.937e-1028.3630S ribosomal protein S1 OS=Shigella flexneri GN=r... [more]
RS1_ECOLI5.937e-1028.3630S ribosomal protein S1 OS=Escherichia coli (stra... [more]
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BLAST of GT623401 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G23700.18.690e-7155.83| Symbols: | Nucleic acid-binding proteins superf... [more]
AT5G30510.16.999e-1228.33| Symbols: RPS1, ARRPS1 | ribosomal protein S1 | c... [more]
AT1G71720.17.242e-929.52| Symbols: | Nucleic acid-binding proteins superf... [more]
AT1G12800.12.330e-725.74| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003029Ribosomal protein S1, RNA-binding domainPFAMPF00575S1coord: 103..171
score: 2.4
IPR003029Ribosomal protein S1, RNA-binding domainPROFILEPS50126S1coord: 15..91
score: 11.719coord: 105..179
score: 15
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140no descriptioncoord: 19..96
score: 1e-06coord: 97..184
score: 6.2
IPR016027Nucleic acid-binding, OB-fold-likeSUPERFAMILY50249Nucleic acid-binding proteinscoord: 102..197
score: 4.9e-19coord: 2..92
score: 1.8
IPR022967RNA-binding domain, S1SMARTSM00316no descriptioncoord: 13..91
score: 0.33coord: 103..179
score: 1.2
NoneNo IPR availablePANTHERPTHR10724TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN)coord: 104..231
score: 3.3
NoneNo IPR availableSEGsegsegcoord: 202..211
score
NoneNo IPR availableSEGsegsegcoord: 25..40
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT623401 ID=GT623401; Name=GT623401; organism=Lens culinaris; type=EST; length=731bp
CGGAAATTATCAGATTGGAAGGCTGCAATCGCATACAGAGATGGTAAACT
CCTCTACAATGGTAGGGTTGAGGCTGTTAATTCCGGAGGCCTGCTGATTC
GGTTTTACTCTATCATGGGGTTTCTCCCATTCCCACAGTTGAGCCCAATG
TATGCAGCTCGAGAGCCACATAAACATATCCGAGATCTTGCGAATGAAAG
GACCGGTTCCATCTTATCCTTATTGGTACTTTTAGTAGATGAGGAGAAAC
AGAATTTGGTCTTCTCTGAAAAGGCTGCCAGCTGGCATAAATATTCAAAA
TATGTCAACTTAGGGGACGTTTTTGATGCAAGAGTTTGTGGTGTTCATGA
CTTTGGTGCTTTTGTTAATCTGCGCTTCCCTGACGGTCTCTATCACCTTT
CTGGGTTAATACATGTCTCAGAAGTGTCATGGGATCTAATTCATGATGTA
AGAGATATCTTAAGAGTAGCCGATGAAGTAAAGGTCAAAATTATTGGTGT
TAATAGTGTAAAATTGAGGTTCTTTGCTTCAATTAAACAGCTAGAAGACG
ACCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGTGTTAGCT
GTTTCTGGTTCTTTCAGCGGTAGTAATAGCAGTCAAATTGAGCCCCTATC
AGGGCTTAAAACAATTCTTGAGGAGCTACTGCAGGAAGATGGCATATACG
AAGCAAGAATCAGCCGTCAGGGGTTTGAAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR003029S1_domain
IPR012340NA-bd_OB-fold
IPR016027Nucleic acid-binding, OB-fold-like
IPR022967S1_dom