CD860312

EST Overview


Name	CD860312
Unique Name	CD860312
Type	EST
Organism	Pisum sativum (pea)
Sequence length	246

Libraries


Library Name	Type
LIBEST_014003 TE	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of CD860312 vs. TrEMBL
Match: Q38JD9_MEDTR (Temperature-induced lipocalin' OS=Medicago truncatula GN=TIL' PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.568e-25
Identity = 58/81 (71.60%), Postives = 61/81 (75.31%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPSFFQPKN ENTRATYTLNSDGTVHVLNETWNNGKR SIEGSAYKA+P SDEA                 +G+YWIL
Sbjct:   27 IASFPSFFQPKNGENTRATYTLNSDGTVHVLNETWNNGKRTSIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPAVGDYWIL 107

[Close]

BLAST of CD860312 vs. TrEMBL
Match: B3TLZ4_ELAGV (Temperature-induced lipocalin OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.958e-25
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPSFFQPKN ENTRATYTLNSDGTVHVLNETW++GKR++IEG+AYKANPNSDEA                  G+YW+L
Sbjct:   27 IASFPSFFQPKNGENTRATYTLNSDGTVHVLNETWSDGKRDAIEGTAYKANPNSDEAKLKVKFYVPPFFPIIPVTGDYWVL 107

[Close]

BLAST of CD860312 vs. TrEMBL
Match: Q38JD5_POPBA (Temperature-induced lipocalin' OS=Populus balsamifera GN=TIL' PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.503e-23
Identity = 55/81 (67.90%), Postives = 59/81 (72.84%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  NTRATYTLN DGTVHVLNETWN+GKR SIEGSAYKA+PNSDEA                 +G+YWIL
Sbjct:   25 IASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGKRGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWIL 105

[Close]

BLAST of CD860312 vs. TrEMBL
Match: Q38JB8_9ROSI (Temperature-induced lipocalin OS=Populus tremula x Populus tremuloides GN=TIL PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.503e-23
Identity = 55/81 (67.90%), Postives = 59/81 (72.84%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  NTRATYTLN DGTVHVLNETWN+GKR SIEGSAYKA+PNSDEA                 +G+YWIL
Sbjct:   25 IASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGKRGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWIL 105

[Close]

BLAST of CD860312 vs. TrEMBL
Match: B6V700_9ROSI (Temperature-induced lipocalin OS=Populus tremula x Populus alba GN=TIL PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.503e-23
Identity = 55/81 (67.90%), Postives = 59/81 (72.84%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  NTRATYTLN DGTVHVLNETWN+GKR SIEGSAYKA+PNSDEA                 +G+YWIL
Sbjct:   25 IASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGKRGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWIL 105

[Close]

BLAST of CD860312 vs. TrEMBL
Match: Q38JB9_POPTM (Temperature-induced lipocalin OS=Populus tremuloides GN=TIL PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.269e-23
Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  NTRATYTLN DGT+HVLNETWN+GKR SIEGSAYKA+PNSDEA                 +G+YWIL
Sbjct:   25 IASFPSRFQPKNGVNTRATYTLNEDGTIHVLNETWNDGKRGSIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWIL 105

[Close]

BLAST of CD860312 vs. TrEMBL
Match: Q38JD7_MESCR (Temperature-induced lipocalin' OS=Mesembryanthemum crystallinum GN=TIL' PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.283e-23
Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPSFFQP++ ENTRATYTLN DGTVHVLNETW++GKR++IEG+AYKA+P SDEA                  GNYW+L
Sbjct:   26 IASFPSFFQPRDGENTRATYTLNDDGTVHVLNETWSHGKRDAIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVTGNYWVL 106

[Close]

BLAST of CD860312 vs. TrEMBL
Match: Q38JC0_POPBA (Temperature-induced lipocalin OS=Populus balsamifera GN=TIL PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.623e-22
Identity = 53/81 (65.43%), Postives = 58/81 (71.60%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  NTRATYTLN DGTVHVLNETWN+GKR  IEGSAYKA+PNSDEA                 +G+YW+L
Sbjct:   25 IASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGKRGYIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVL 105

[Close]

BLAST of CD860312 vs. TrEMBL
Match: B9IMG7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_738040 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.623e-22
Identity = 53/81 (65.43%), Postives = 58/81 (71.60%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  NTRATYTLN DGTVHVLNETWN+GKR  IEGSAYKA+PNSDEA                 +G+YW+L
Sbjct:   25 IASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGKRGYIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVL 105

[Close]

BLAST of CD860312 vs. TrEMBL
Match: B6V701_POPEU (Temperature-induced lipocalin OS=Populus euphratica GN=TIL PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.623e-22
Identity = 53/81 (65.43%), Postives = 58/81 (71.60%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  NTRATYTLN DGTVHVLNETWN+GKR  IEGSAYKA+PNSDEA                 +G+YW+L
Sbjct:   25 IASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWNDGKRGYIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVL 105

[Close]

BLAST of CD860312 vs. TAIR peptide
Match: AT5G58070.1 (| Symbols: ATTIL, TIL | temperature-induced lipocalin | chr5:23500512-23501156 REVERSE LENGTH=186)

HSP 1 Score: 103.99 bits (258), Expect = 2.023e-23
Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = -3

Query:    2 IASFPSFFQPKNSENTRATYTLNSDGTVHVLNETWNNGKRNSIEGSAYKANPNSDEAXXXXXXXXXXXXXXXXXLGNYWIL 244
            IASFPS FQPKN  +TRATYTLN DGT+HVLNETW+NGKR  IEGSAYKA+P SDEA                  G+YW+L
Sbjct:   25 IASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGKRGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVL 105

The following BLAST results are available for this feature:

BLAST of CD860312 vs. TrEMBL
BLAST of CD860312 vs. TAIR peptide

BLAST of CD860312 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q38JD9_MEDTR	1.568e-25	71.60	Temperature-induced lipocalin' OS=Medicago truncat...	[more]
B3TLZ4_ELAGV	5.958e-25	67.90	Temperature-induced lipocalin OS=Elaeis guineensis...	[more]
Q38JD5_POPBA	2.503e-23	67.90	Temperature-induced lipocalin' OS=Populus balsamif...	[more]
Q38JB8_9ROSI	2.503e-23	67.90	Temperature-induced lipocalin OS=Populus tremula x...	[more]
B6V700_9ROSI	2.503e-23	67.90	Temperature-induced lipocalin OS=Populus tremula x...	[more]
Q38JB9_POPTM	3.269e-23	66.67	Temperature-induced lipocalin OS=Populus tremuloid...	[more]
Q38JD7_MESCR	7.283e-23	62.96	Temperature-induced lipocalin' OS=Mesembryanthemum...	[more]
Q38JC0_POPBA	1.623e-22	65.43	Temperature-induced lipocalin OS=Populus balsamife...	[more]
B9IMG7_POPTR	1.623e-22	65.43	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B6V701_POPEU	1.623e-22	65.43	Temperature-induced lipocalin OS=Populus euphratic...	[more]

BLAST of CD860312 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G58070.1	2.023e-23	61.73	\| Symbols: ATTIL, TIL \| temperature-induced lipoca...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011038	Calycin-like	SUPERFAMILY	50814	Lipocalins	coord: 1..81 score: 2.8
IPR012674	Calycin	GENE3D	2.40.128.20	no description	coord: 1..81 score: 5.4
IPR013208	Lipocalin-like	PFAM	PF08212	Lipocalin_2	coord: 1..81 score: 3.9
None	No IPR available	SEG	seg	seg	coord: 58..75 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CD860312 ID=CD860312; Name=CD860312; organism=Pisum sativum; type=EST; length=246bp
ACAAAATCCAGTAGTTTCCAAGAACAGGAATGATTGGCAAGAATGGAGGA
ACAAAGAACTTGACCTTGAGTTTGGCTTCATCGCTATTAGGGTTAGCTTT
ATAAGCACTTCCCTCTATGGAGTTTCTTTTTCCATTATTCCATGTCTCGT
TGAGGACATGAACAGTTCCATCACTGTTTAGAGTATAGGTGGCTCTAGTG
TTCTCACTGTTTTTGGGTTGGAAAAACGAAGGAAAAGAAGCAATCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011038	Calycin-like
IPR012674	Calycin
IPR013208	Lipocalin-like

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