GT623773

EST Overview
NameGT623773
Unique NameGT623773
TypeEST
OrganismLens culinaris (lentil)
Sequence length394
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT623773 vs. TrEMBL
Match: C6TKD8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.251e-19
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQSLAVEATVHA 195
            RNV S K+ GL+TV+VG SDLVPGADHALNSIHNI+EALPEIWE+E+GNQQQ IQ   VE  V A
Sbjct:  210 RNVESAKITGLNTVLVGHSDLVPGADHALNSIHNIKEALPEIWEIEDGNQQQKIQPPTVETMVLA 274          
BLAST of GT623773 vs. TrEMBL
Match: D7U2S1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028227001 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.208e-19
Identity = 50/66 (75.76%), Postives = 54/66 (81.82%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQ-QQIIQSLAVEATVHA 195
            RN+ SGK AGLHTVIVG S LVPGADHAL SIHNI+EALPEIWE EEG Q +Q+IQS AVE  V A
Sbjct:  237 RNITSGKAAGLHTVIVGSSVLVPGADHALGSIHNIKEALPEIWEGEEGEQLEQVIQSTAVETVVLA 302          
BLAST of GT623773 vs. TrEMBL
Match: B9I993_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774603 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.964e-18
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQSLAVEATVHA 195
            RN+ASGK AGL TVIVG S LVPGADH L +IHNI+EA+PEIWE E    +Q+IQS AVE  VHA
Sbjct:  197 RNIASGKAAGLRTVIVGSSVLVPGADHGLRNIHNIKEAIPEIWEDEGEQSEQVIQSTAVETVVHA 261          
BLAST of GT623773 vs. TrEMBL
Match: B9RN19_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_1342600 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.390e-16
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQS--LAVEATVHA 195
            RN+ASGK AGLHTVIVG S LVPGADH L+SIHNI+EA+PEIWE E  + +Q+I S   AVEA V A
Sbjct:  217 RNIASGKAAGLHTVIVGSSVLVPGADHVLSSIHNIKEAIPEIWEGEGEHLEQVIPSSASAVEALVLA 283          
BLAST of GT623773 vs. TrEMBL
Match: C5WU24_SORBI (Putative uncharacterized protein Sb01g002590 OS=Sorghum bicolor GN=Sb01g002590 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.431e-15
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQSLAVEATVHA 195
            RN+ASGK AG HTVIVGR  LVPGADHAL SI N++EALPEIW+ ++ ++  ++ S AVE  V A
Sbjct:  213 RNIASGKAAGFHTVIVGRPTLVPGADHALESIQNMKEALPEIWDGQDWSESDVLSSTAVETVVVA 277          
BLAST of GT623773 vs. TrEMBL
Match: B9GRV9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_644719 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.431e-15
Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQSLAVE 180
            RN+ASGK AGLHTVIVG S LVPGAD+AL SIHNI+EA+PEIWE E    + +IQS  VE
Sbjct:  241 RNIASGKAAGLHTVIVGSSVLVPGADNALRSIHNIKEAIPEIWEDEGEEMELVIQSTTVE 300          
BLAST of GT623773 vs. TrEMBL
Match: C5X396_SORBI (Putative uncharacterized protein Sb02g040450 OS=Sorghum bicolor GN=Sb02g040450 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.164e-15
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQSLAVEATVHA 195
            RN+A+GK AG HTVIVG S LVPGAD AL SIHNI+EALPE+WE    + + +++S AVE TV A
Sbjct:  189 RNIAAGKAAGFHTVIVGSSALVPGADVALESIHNIKEALPELWEAAGDHVEAVLRSAAVETTVIA 253          
BLAST of GT623773 vs. TrEMBL
Match: B4FFT4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.067e-14
Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQ-IIQSLAVEATVHA 195
            RN+ASGK AG HTVIVGR  LVPGADHAL SIHN++EALPEIW+ ++ ++   ++   AVE  V A
Sbjct:  215 RNIASGKAAGFHTVIVGRPTLVPGADHALESIHNMKEALPEIWDGQDRSESDALLSPTAVETPVAA 280          
BLAST of GT623773 vs. TrEMBL
Match: Q75LI3_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0096I06.24 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.525e-14
Identity = 42/65 (64.62%), Postives = 47/65 (72.31%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQSLAVEATVHA 195
            RN+ASGK AG HTVIVGR  LVPGADHAL SIHNI+EALPEIW+        ++ S A E TV A
Sbjct:  215 RNIASGKAAGFHTVIVGRPTLVPGADHALESIHNIKEALPEIWD-GWSESDVVLASTASETTVIA 278          
BLAST of GT623773 vs. TrEMBL
Match: B8AMS5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14203 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.525e-14
Identity = 42/65 (64.62%), Postives = 47/65 (72.31%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQIIQSLAVEATVHA 195
            RN+ASGK AG HTVIVGR  LVPGADHAL SIHNI+EALPEIW+        ++ S A E TV A
Sbjct:  215 RNIASGKAAGFHTVIVGRPTLVPGADHALESIHNIKEALPEIWD-GWSESDVVLASTASETTVIA 278          
BLAST of GT623773 vs. TAIR peptide
Match: AT3G62040.1 (| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr3:22975328-22976518 REVERSE LENGTH=249)

HSP 1 Score: 72.7886 bits (177), Expect = 6.484e-14
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQ-QQIIQSLAVEATVHA 195
            RN+AS K  GL TV VG S LVPGAD+AL+SIHNI+EA+P++WE  +  + + I+Q  AV   V+A
Sbjct:  184 RNIASAKATGLKTVFVGESVLVPGADYALSSIHNIKEAIPDLWEDNKDEKLEPIVQQAAVATMVNA 249          
BLAST of GT623773 vs. TAIR peptide
Match: AT5G59490.1 (| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:23982922-23984419 REVERSE LENGTH=266)

HSP 1 Score: 64.6994 bits (156), Expect = 1.766e-11
Identity = 29/70 (41.43%), Postives = 46/70 (65.71%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEV-----EEGNQQQIIQSLAVEATVHA 195
            RN+ +GK  GLHTV+VG+S+ + G+D+AL SIHN++EA PE+W       +E  +      +++E +V A
Sbjct:  197 RNIQTGKAVGLHTVLVGKSEKIDGSDYALESIHNMKEAFPELWSESIINNKETERIDYASQISIETSVQA 266          
BLAST of GT623773 vs. TAIR peptide
Match: AT5G02230.2 (| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:449132-450507 FORWARD LENGTH=280)

HSP 1 Score: 64.3142 bits (155), Expect = 2.306e-11
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVE-EGNQQQIIQSLAVEATVHA 195
            RNV +GK  GL+TV+VG+S  V GAD+AL +IHN++EA+PE+WE + + +       +AVE +V A
Sbjct:  215 RNVQAGKRVGLYTVLVGKSTKVKGADYALENIHNMKEAIPELWESDRKSSDVGYSGKVAVETSVRA 280          
BLAST of GT623773 vs. TAIR peptide
Match: AT5G02230.1 (| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:449132-450507 FORWARD LENGTH=280)

HSP 1 Score: 64.3142 bits (155), Expect = 2.306e-11
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVE-EGNQQQIIQSLAVEATVHA 195
            RNV +GK  GL+TV+VG+S  V GAD+AL +IHN++EA+PE+WE + + +       +AVE +V A
Sbjct:  215 RNVQAGKRVGLYTVLVGKSTKVKGADYALENIHNMKEAIPELWESDRKSSDVGYSGKVAVETSVRA 280          
BLAST of GT623773 vs. TAIR peptide
Match: AT5G59480.2 (| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:23979619-23981156 REVERSE LENGTH=281)

HSP 1 Score: 58.5362 bits (140), Expect = 1.265e-9
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQI--IQSLAVE 180
            RN+ +GK  GLHTV VG S    G D AL  IHNIREALP++W+  +   ++I   Q +A+E
Sbjct:  217 RNIQTGKRVGLHTVWVGTSHREEGVDIALEHIHNIREALPQLWDAVDDKAKEIRTRQKVAIE 278          
BLAST of GT623773 vs. TAIR peptide
Match: AT5G59480.1 (| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:23979619-23981156 REVERSE LENGTH=282)

HSP 1 Score: 58.5362 bits (140), Expect = 1.265e-9
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query:    1 RNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALPEIWEVEEGNQQQI--IQSLAVE 180
            RN+ +GK  GLHTV VG S    G D AL  IHNIREALP++W+  +   ++I   Q +A+E
Sbjct:  218 RNIQTGKRVGLHTVWVGTSHREEGVDIALEHIHNIREALPQLWDAVDDKAKEIRTRQKVAIE 279          
The following BLAST results are available for this feature:
BLAST of GT623773 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TKD8_SOYBN1.251e-1973.85Putative uncharacterized protein OS=Glycine max PE... [more]
D7U2S1_VITVI6.208e-1975.76Whole genome shotgun sequence of line PN40024, sca... [more]
B9I993_POPTR8.964e-1869.23Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RN19_RICCO8.390e-1668.66Catalytic, putative OS=Ricinus communis GN=RCOM_13... [more]
C5WU24_SORBI1.431e-1561.54Putative uncharacterized protein Sb01g002590 OS=So... [more]
B9GRV9_POPTR1.431e-1570.00Predicted protein (Fragment) OS=Populus trichocarp... [more]
C5X396_SORBI4.164e-1563.08Putative uncharacterized protein Sb02g040450 OS=So... [more]
B4FFT4_MAIZE2.067e-1460.61Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q75LI3_ORYSJ3.525e-1464.62Expressed protein OS=Oryza sativa subsp. japonica ... [more]
B8AMS5_ORYSI3.525e-1464.62Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT623773 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT3G62040.16.484e-1454.55| Symbols: | Haloacid dehalogenase-like hydrolase... [more]
AT5G59490.11.766e-1141.43| Symbols: | Haloacid dehalogenase-like hydrolase... [more]
AT5G02230.22.306e-1148.48| Symbols: | Haloacid dehalogenase-like hydrolase... [more]
AT5G02230.12.306e-1148.48| Symbols: | Haloacid dehalogenase-like hydrolase... [more]
AT5G59480.21.265e-948.39| Symbols: | Haloacid dehalogenase-like hydrolase... [more]
AT5G59480.11.265e-948.39| Symbols: | Haloacid dehalogenase-like hydrolase... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1000no descriptioncoord: 2..45
score: 1.9

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT623773 ID=GT623773; Name=GT623773; organism=Lens culinaris; type=EST; length=394bp
AGAAATGTTGCAAGTGGAAAAGTAGCTGGACTTCACACTGTGATTGTCGG
TCGTTCAGATTTAGTGCCCGGTGCAGACCATGCTCTGAACAGCATTCATA
ATATCAGAGAAGCGTTACCTGAAATATGGGAGGTTGAAGAAGGCAACCAA
CAGCAAATAATCCAATCACTTGCAGTAGAAGCTACAGTCCATGCATAGGT
TTTGCTTCGACAAAACATATTAGTAAGCTTATTAGGCAAATCAAGAGTTA
CCTGAAATAATGTTGCAACTGTCTCCACAGTACAGTGGAGCTTAAATGTA
TGAATCTTGCAAATGGCATCACAAAATGGATGCGAGACTATTAAACGTAA
AGTTCTAAAACATAAATTTATTATAGAAAATGACAATTACTGTT
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