GT625906
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT625906 vs. TrEMBL
Match: C5WQT8_SORBI (Putative uncharacterized protein Sb01g040640 OS=Sorghum bicolor GN=Sb01g040640 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.518e-19 Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 102 AATTASPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 AA A+P+++++++LFRS +R ++QF DYNIREYT+RRA DAFR+N L QLEVAKRQA+VYSLY P SVME++ Sbjct: 3 AAAAAAPTRTEVLALFRSLLRTAKQFSDYNIREYTRRRAADAFRENRALADAPAAAAAFSEGKKQLEVAKRQALVYSLYAPKAKSVMELK 92
BLAST of GT625906 vs. TrEMBL
Match: B6TSM6_MAIZE (Catalytic/ oxidoreductase, acting on NADH or NADPH OS=Zea mays PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.675e-18 Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 3 Query: 114 ASPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 A+P++++++SLFRS +R ++QF DYNIREYT+RRA DAFR+N+ L QLEVAKRQAV+YS+Y P SVME++ Sbjct: 4 AAPTRAEVLSLFRSLLRTAKQFSDYNIREYTRRRAADAFRENSALSDAPSAAALFAVGKQQLEVAKRQAVIYSIYAPKAKSVMELK 89
BLAST of GT625906 vs. TrEMBL
Match: Q0J724_ORYSJ (Os08g0239000 protein OS=Oryza sativa subsp. japonica GN=Os08g0239000 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.312e-18 Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 3 Query: 117 SPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 +P++++ +SLFRS +R +RQF DYNIREYT+RRA DAFR+N L QLEVAKRQAVVYSLY P S+ME++ Sbjct: 4 APTRAEALSLFRSLLRTARQFSDYNIREYTRRRAADAFRENRALGDTAAAAAAFADGKKQLEVAKRQAVVYSLYAPKAKSIMEMK 88
BLAST of GT625906 vs. TrEMBL
Match: B6SQD4_MAIZE (Catalytic/ oxidoreductase, acting on NADH or NADPH OS=Zea mays PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.312e-18 Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 3 Query: 114 ASPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 A+P++++++SLFRS +R +++F DYNIREYT+RRA D+FR+N L QLEVAKRQAVVYSLY P SVME++ Sbjct: 4 AAPTRAEVLSLFRSLLRTAKKFSDYNIREYTRRRAADSFRENRALADASAAAAAFSEGKKQLEVAKRQAVVYSLYAPKAKSVMELK 89
BLAST of GT625906 vs. TrEMBL
Match: A9PDG3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833143 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.312e-18 Identity = 48/88 (54.55%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 111 TASPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQN 374 +A+ S+ +I+ L+RS +R +RQF DYNIREYTKRR +DAFRQN L QL+VAKRQAVVYSLY P + SVME Q+ Sbjct: 3 SAAISRGEILYLYRSLLRTARQFCDYNIREYTKRRTIDAFRQNQNLTDSLAISAAYSDGKTQLDVAKRQAVVYSLYAPTIKSVMEAQS 90
BLAST of GT625906 vs. TrEMBL
Match: Q948I3_ORYSA (Putative CGI-203 homolog OS=Oryza sativa GN=OSJNBa0060A14.13 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-17 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 3 Query: 114 ASPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 A+P++++ +SLFRS +R +RQF DYNIREY +RRA DAFR+N L QLEVAKRQAVVYSLY P S+ME++ Sbjct: 3 AAPTRAEALSLFRSLLRTARQFSDYNIREYARRRAADAFRENRALGDAVAAAAVFADGKKQLEVAKRQAVVYSLYAPKAKSIMEMK 88
BLAST of GT625906 vs. TrEMBL
Match: Q7XEU6_ORYSJ (Complex 1 family protein, putative, expressed OS=Oryza sativa subsp. japonica GN=Os10g0406600 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-17 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 3 Query: 114 ASPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 A+P++++ +SLFRS +R +RQF DYNIREY +RRA DAFR+N L QLEVAKRQAVVYSLY P S+ME++ Sbjct: 3 AAPTRAEALSLFRSLLRTARQFSDYNIREYARRRAADAFRENRALGDAVAAAAVFADGKKQLEVAKRQAVVYSLYAPKAKSIMEMK 88
BLAST of GT625906 vs. TrEMBL
Match: B9RLS6_RICCO (Protein C6orf149, putative OS=Ricinus communis GN=RCOM_1470530 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-17 Identity = 47/86 (54.65%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 123 SKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQNKP 380 SK +I+SL RS +R +RQF DYNIREYTKRR +DAFR+N L QL+VAKRQ VVYSLY P + SVME ++ P Sbjct: 3 SKGEILSLCRSLLRTARQFSDYNIREYTKRRTIDAFRENRNLTDPSSISAAFSDGKAQLDVAKRQVVVYSLYAPKIKSVMETKSSP 88
BLAST of GT625906 vs. TrEMBL
Match: A2Z744_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33519 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-17 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 3 Query: 114 ASPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 A+P++++ +SLFRS +R +RQF DYNIREY +RRA DAFR+N L QLEVAKRQAVVYSLY P S+ME++ Sbjct: 3 AAPTRAEALSLFRSLLRTARQFSDYNIREYARRRAADAFRENRALGDAAAAAAVFADGKKQLEVAKRQAVVYSLYAPKAKSIMEMK 88
BLAST of GT625906 vs. TrEMBL
Match: A2YSQ8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28356 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.037e-17 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 3 Query: 117 SPSKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 +P++++ +SLFRS +R +RQF DYNIREYT+RR VDAF +N L QLEVAKRQAVVYSLY P S+ME++ Sbjct: 4 APTRAEALSLFRSLLRTARQFSDYNIREYTRRRTVDAFCENRVLGDAVAEAAAFADGKKQLEVAKRQAVVYSLYAPKAKSIMEMK 88
BLAST of GT625906 vs. TAIR peptide
Match: AT5G61220.1 (| Symbols: | LYR family of Fe/S cluster biogenesis protein | chr5:24626057-24626320 REVERSE LENGTH=87) HSP 1 Score: 72.0182 bits (175), Expect = 3.142e-13 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 123 SKSQIISLFRSFIRVSRQFPDYNIREYTKRRAVDAFRQNATLXXXXXXXXXXXXXXXQLEVAKRQAVVYSLYVPPLPSVMEIQ 371 S S+++SL R+ +R RQFPDYNIREY+KRR +D FR N L QL VA+R VY Y P ++ME++ Sbjct: 3 SSSEVLSLCRALLRAGRQFPDYNIREYSKRRTLDGFRMNKNLTDPSKVTEAYAEAKKQLFVAERVLKVYLAYPPKTKNIMEVK 85 The following BLAST results are available for this feature:
BLAST of GT625906 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT625906 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT625906 ID=GT625906; Name=GT625906; organism=Lens culinaris; type=EST; length=657bpback to top |