GT626288

EST Overview
NameGT626288
Unique NameGT626288
TypeEST
OrganismLens culinaris (lentil)
Sequence length731
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT626288 vs. TrEMBL
Match: B7FGN5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.199e-45
Identity = 83/107 (77.57%), Postives = 88/107 (82.24%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            MNFRN EDFWAFYVSQHSKRATRHWHFVGT LS+ FL+C              SGYGCAWYSHFFVEKNVP TFGHPFWS +CDYKMFGLM+TG+MDREIKRLGKRP
Sbjct:    1 MNFRNLEDFWAFYVSQHSKRATRHWHFVGTFLSLLFLLCSFLFSWWFLLFVPLSGYGCAWYSHFFVEKNVPATFGHPFWSFLCDYKMFGLMLTGQMDREIKRLGKRP 107          
BLAST of GT626288 vs. TrEMBL
Match: A9PAJ9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.918e-35
Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            MNFR+ ++FW+FYV+QHSK +TR WHFVGTL S+  L+                GYGCAWYSHFFVE NVP TFGHP WS +CD+KMFGLM+TG+MDREIKRL KRP
Sbjct:    2 MNFRSLDEFWSFYVTQHSKPSTRRWHFVGTLASMLLLLNSLVFNLWFLFLVPFVGYGCAWYSHFFVEGNVPATFGHPVWSFLCDFKMFGLMLTGQMDREIKRLEKRP 108          
BLAST of GT626288 vs. TrEMBL
Match: B9HCJ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_653085 PE=4 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.770e-34
Identity = 69/107 (64.49%), Postives = 78/107 (72.90%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            MNFR+ E+FW+FYV+QHSK +TR WHFVGTL SI  L+                GYG AWYSHFFVE NVP +FGHP WS  CD KMFGLM+TG+MDREIKRLGKRP
Sbjct:    1 MNFRSLEEFWSFYVTQHSKPSTRRWHFVGTLSSILLLLYSLVFNLWFLFFVPLVGYGFAWYSHFFVEGNVPTSFGHPVWSFRCDCKMFGLMLTGQMDREIKRLGKRP 107          
BLAST of GT626288 vs. TrEMBL
Match: A9NP65_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.770e-34
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            M FRN E+FWAFY++QHSK +TR WHF G L +  FL+                GYG AWYSHFF+E NVP +FGHP WSL+CD+KMFGLM+TG+MDREIKRLGKRP
Sbjct:    1 MQFRNREEFWAFYMNQHSKASTRRWHFCGMLAAGFFLLAAILIKWWLGFFVPIFGYGLAWYSHFFIEGNVPASFGHPVWSLLCDFKMFGLMLTGQMDREIKRLGKRP 107          
BLAST of GT626288 vs. TrEMBL
Match: D7L7R4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478219 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.386e-32
Identity = 63/107 (58.88%), Postives = 73/107 (68.22%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            MNFR+ E+FW FYV QHS   TR WHF+G + SI  L+C               GYG AWYSHFFVE NVP +FGHP WS +CD KMF LM+TG M+RE+KRLGKRP
Sbjct:    1 MNFRSFEEFWPFYVMQHSNPLTRRWHFIGIIASIVALMCSILINWWFVALVPLLGYGFAWYSHFFVEGNVPASFGHPLWSFLCDLKMFSLMLTGSMEREMKRLGKRP 107          
BLAST of GT626288 vs. TrEMBL
Match: A9SQD9_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166158 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.853e-32
Identity = 62/107 (57.94%), Postives = 73/107 (68.22%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            M+FRN E+FW FYV+QHS  +TR WHF  T  +  FL+                GYG AWYSHFF+E N P +FGHP WSL+CDYKMF LM+TG+MDREIK LGKRP
Sbjct:    1 MHFRNFEEFWPFYVNQHSNASTRRWHFCATGCATLFLIAGIVIKWWLLFFAPMFGYGLAWYSHFFIEGNTPASFGHPIWSLICDYKMFFLMLTGRMDREIKWLGKRP 107          
BLAST of GT626288 vs. TrEMBL
Match: Q8LDK7_ARATH (At3g09085 OS=Arabidopsis thaliana GN=At3g09085 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.341e-31
Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            MNFR+ E+FW FY+ QHS  +TR  HF+G + SI  L+C               GYG AWYSHFFVE NVP +FGHP WS +CD KMF LM+TG M+RE+KRLGKRP
Sbjct:    1 MNFRSFEEFWPFYMMQHSNPSTRRLHFIGIIASIVALICSILINWWFLALVPLLGYGFAWYSHFFVEGNVPASFGHPLWSFLCDLKMFSLMLTGSMEREMKRLGKRP 107          
BLAST of GT626288 vs. TrEMBL
Match: A9RUB2_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_70655 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.089e-30
Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            M+FRN E++W FYV+QH+K +TR WHF  T L+  F +                G+G AWYSHFF+E N P +FGHP WS +CDYKMF LM+TG+MDREIKRLGKRP
Sbjct:    1 MHFRNFEEYWPFYVNQHTKISTRRWHFCATGLAAVFTIAGIVIKWWLLFFAPLFGFGLAWYSHFFIEGNKPGSFGHPIWSFICDYKMFILMLTGRMDREIKRLGKRP 107          
BLAST of GT626288 vs. TrEMBL
Match: B6TSG7_MAIZE (Transmembrane protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.055e-25
Identity = 55/106 (51.89%), Postives = 69/106 (65.09%), Query Frame = 3
Query:   24 FRNSEDFWAFYVSQHSKRATRHWHFVGTLLSI-CFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            F + E+FW FY+SQHSK  TR WHF+GTL S+ C ++                GYG AWYSHFFVE N P TFGHP WS +CD +MF L++TG++D E+ RL  RP
Sbjct:   15 FGSMEEFWGFYLSQHSKPGTRRWHFLGTLASLACAVLAAATGRAAVLLAGPVLGYGMAWYSHFFVEGNRPATFGHPVWSFLCDLRMFLLILTGRIDAELARLRVRP 120          
BLAST of GT626288 vs. TrEMBL
Match: Q84JI3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1012B02.17 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.351e-25
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 3
Query:   24 FRNSEDFWAFYVSQHSKRATRHWHFVGTLLSI-CFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            F + E+FW FY++QHSK  TR WHF+GTL ++ C L+                GYG AWYSHFFVE N P TFGHP WS +CD +MF L++TG++D E+ RL  +P
Sbjct:   14 FGSMEEFWGFYLTQHSKPGTRRWHFLGTLAALACALLAAVSGRAAPLLAAPVLGYGMAWYSHFFVEGNRPATFGHPVWSFLCDLRMFALILTGRIDAELARLRLQP 119          
BLAST of GT626288 vs. TAIR peptide
Match: AT3G09085.1 (| Symbols: | Protein of unknown function (DUF962) | chr3:2782238-2782576 FORWARD LENGTH=112)

HSP 1 Score: 137.887 bits (346), Expect = 5.507e-33
Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 3
Query:   18 MNFRNSEDFWAFYVSQHSKRATRHWHFVGTLLSICFLVCXXXXXXXXXXXXXXSGYGCAWYSHFFVEKNVPVTFGHPFWSLVCDYKMFGLMVTGKMDREIKRLGKRP 338
            MNFR+ E+FW FY+ QHS  +TR  HF+G + SI  L+C               GYG AWYSHFFVE NVP +FGHP WS +CD KMF LM+TG M+RE+KRLGKRP
Sbjct:    1 MNFRSFEEFWPFYMMQHSNPSTRRLHFIGIIASIVALICSILINWWFLALVPLLGYGFAWYSHFFVEGNVPASFGHPLWSFLCDLKMFSLMLTGSMEREMKRLGKRP 107          
The following BLAST results are available for this feature:
BLAST of GT626288 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FGN5_MEDTR1.199e-4577.57Putative uncharacterized protein OS=Medicago trunc... [more]
A9PAJ9_POPTR1.918e-3563.55Putative uncharacterized protein OS=Populus tricho... [more]
B9HCJ2_POPTR2.770e-3464.49Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9NP65_PICSI2.770e-3461.68Putative uncharacterized protein OS=Picea sitchens... [more]
D7L7R4_ARALY3.386e-3258.88Putative uncharacterized protein OS=Arabidopsis ly... [more]
A9SQD9_PHYPA9.853e-3257.94Predicted protein OS=Physcomitrella patens subsp. ... [more]
Q8LDK7_ARATH8.341e-3157.01At3g09085 OS=Arabidopsis thaliana GN=At3g09085 PE=... [more]
A9RUB2_PHYPA1.089e-3056.07Predicted protein OS=Physcomitrella patens subsp. ... [more]
B6TSG7_MAIZE1.055e-2551.89Transmembrane protein OS=Zea mays PE=2 SV=1[more]
Q84JI3_ORYSJ2.351e-2550.00Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT626288 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G09085.15.507e-3357.01| Symbols: | Protein of unknown function (DUF962)... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 40..55
score
NoneNo IPR availableSEGsegsegcoord: 46..59
score
NoneNo IPR availableSEGsegsegcoord: 27..43
score: NAcoord: 45..57
score
IPR009305Protein of unknown function DUF962PFAMPF06127DUF962coord: 9..101
score: 7.7

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT626288 ID=GT626288; Name=GT626288; organism=Lens culinaris; type=EST; length=731bp
ACACTTTGTTGAACCCAATGAATTTCAGAAACTCGGAAGATTTCTGGGCT
TTTTATGTGAGTCAACATTCGAAACGAGCTACGAGGCATTGGCACTTTGT
GGGGACGCTTTTGAGTATTTGTTTCTTGGTGTGTTCGGTTTTCTTCAGTT
GGTGGTTTTTGTTCTTTGTTCCTTTATCTGGGTACGGGTGTGCTTGGTAT
AGTCATTTCTTTGTCGAGAAGAATGTTCCTGTTACTTTTGGACACCCCTT
TTGGTCGTTGGTGTGTGATTACAAAATGTTTGGGTTGATGGTTACTGGAA
AAATGGATAGAGAGATCAAGAGGCTTGGGAAAAGACCTGTGTTGCAAGTG
TTTTGATTTGTGTACGTTTGTTTGGTCTTTGTTGTTTGAGACACAGGTAT
GTGATTTTGAGATTTGAAGTGTTTCAGACCAACACCGATACTGGAAGGCT
CAAAGCGAAGATGGATTCATATGTAGCTGTGCAGTGAGAATGATGTGTTG
TATAGTGTTCGATTTTATAGTATCATATGAATCATAACACCACTTGAAAT
TGTAACAAAATAATAATTTTTTATGCGGTGTGTTCTGTCTAATGCAAACT
TGCCCTTGCATTCTCACACCACAACTTTTTCCTTACCCAAAATATATCTT
TCTTGAAAACTATTATTGGGATCTAACATATTTTTTATTCGTGTAATTTG
TTTTCATTGATAAAGCCCCTCATTTCTTTTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR009305Mpo1-like