GT626716

EST Overview
NameGT626716
Unique NameGT626716
TypeEST
OrganismLens culinaris (lentil)
Sequence length596
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT626716 vs. TrEMBL
Match: B9NAB4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_787255 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.292e-41
Identity = 80/104 (76.92%), Postives = 88/104 (84.62%), Query Frame = 2
Query:   11 ERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            ERW++HSTA YA  IIAQTGL++PS ATL KVAE+LFQEFQS G NI +PFF KAHRWG AFP ASI +E+KCLW R KRLAICGDFCVSPNVEGAI SG AAA
Sbjct:  259 ERWVLHSTANYARGIIAQTGLQKPSSATLTKVAEELFQEFQSIGLNIPRPFFMKAHRWGSAFPTASIAREQKCLWDRKKRLAICGDFCVSPNVEGAILSGLAAA 362          
BLAST of GT626716 vs. TrEMBL
Match: D7SWZ7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_27.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020458001 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.727e-40
Identity = 77/105 (73.33%), Postives = 89/105 (84.76%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            SERW++HST EYA  ++AQ GL++PS +TL KVAE+LF+EFQ TG  ISQPFFKKAHRWG AFPAASI +EEKCLW R KR+AICGDFCVSP VEGAI SG AA+
Sbjct:  255 SERWVLHSTMEYARGVVAQIGLQKPSSSTLAKVAEELFEEFQRTGLTISQPFFKKAHRWGSAFPAASIAREEKCLWDRKKRVAICGDFCVSPTVEGAILSGMAAS 359          
BLAST of GT626716 vs. TrEMBL
Match: A5B645_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000801 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.053e-39
Identity = 76/105 (72.38%), Postives = 89/105 (84.76%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            SERW++HST EYA  ++AQ GL++PS +TL KVAE+LF+EFQ TG  ISQPFFKKAHRWG AFPAASI +EEKCLW + KR+AICGDFCVSP VEGAI SG AA+
Sbjct:  255 SERWVLHSTMEYARGVVAQIGLQKPSSSTLAKVAEELFEEFQRTGLTISQPFFKKAHRWGSAFPAASIAREEKCLWDKKKRVAICGDFCVSPTVEGAILSGMAAS 359          
BLAST of GT626716 vs. TrEMBL
Match: Q9SGS8_ARATH (T6H22.20 protein OS=Arabidopsis thaliana GN=T6H22.20 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.063e-36
Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            SERWI+HST +YA ++IA+TGL++ S  TLNK++E++F+EFQ +G   S PFF KAHRWG AFPA SI  EE+CLW RN+ LAICGDFCVSPNVEGAI SG AAA
Sbjct:  282 SERWILHSTPDYANSVIAKTGLQKLSSETLNKISEEMFKEFQCSGLVSSLPFFMKAHRWGSAFPAKSIAVEERCLWDRNRNLAICGDFCVSPNVEGAILSGLAAA 386          
BLAST of GT626716 vs. TrEMBL
Match: Q8VYV2_ARATH (AT1G56000 protein OS=Arabidopsis thaliana GN=AT1G56000 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.063e-36
Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            SERWI+HST +YA ++IA+TGL++ S  TLNK++E++F+EFQ +G   S PFF KAHRWG AFPA SI  EE+CLW RN+ LAICGDFCVSPNVEGAI SG AAA
Sbjct:  270 SERWILHSTPDYANSVIAKTGLQKLSSETLNKISEEMFKEFQCSGLVSSLPFFMKAHRWGSAFPAKSIAVEERCLWDRNRNLAICGDFCVSPNVEGAILSGLAAA 374          
BLAST of GT626716 vs. TrEMBL
Match: D7KN58_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474667 PE=4 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.055e-35
Identity = 70/104 (67.31%), Postives = 85/104 (81.73%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAA 319
            SERWI+HST +YA ++IA+TGL++ S  TLNK++E++F+EFQ +G   S PFF KAHRWG AFPA SI  EE+CLW RN+ LAICGDFCVSPNVEGAI SG AA
Sbjct:  270 SERWILHSTPDYANSVIAKTGLQKLSSETLNKISEEMFKEFQCSGLVSSLPFFMKAHRWGSAFPAKSIAVEERCLWDRNRNLAICGDFCVSPNVEGAILSGLAA 373          
BLAST of GT626716 vs. TrEMBL
Match: D7KN42_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_682656 PE=4 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.505e-35
Identity = 70/105 (66.67%), Postives = 85/105 (80.95%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            SERWI+HST +Y  ++IA+TGL++ S  TLNK++E++F+EFQ +G   S PFF KAHRWG AFPA SI  EE+CLW RN+ LAICGDFCVSPNVEGAI SG AAA
Sbjct:  286 SERWILHSTPDYDNSVIAKTGLQKLSSETLNKISEEMFKEFQCSGLVSSLPFFMKAHRWGSAFPAKSIAVEERCLWDRNRNLAICGDFCVSPNVEGAILSGLAAA 390          
BLAST of GT626716 vs. TrEMBL
Match: B8LM51_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.247e-32
Identity = 64/105 (60.95%), Postives = 78/105 (74.29%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            SE W++HSTAEYA +I++QT LK+PSD  LN V  DLF EFQ T  ++  PFF KAHRWG AFP   I + + CLW  NKR A+CGDFCV+P+VEGA+ SG AAA
Sbjct:   53 SECWVLHSTAEYANHIVSQTDLKKPSDDILNMVKNDLFNEFQKTAPHMPSPFFMKAHRWGSAFPTKIIAKNDNCLWLDNKRFAVCGDFCVAPDVEGAMLSGLAAA 157          
BLAST of GT626716 vs. TrEMBL
Match: Q10CG2_ORYSJ (Amine oxidase, putative, expressed OS=Oryza sativa subsp. japonica GN=Os03g0784000 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.434e-30
Identity = 60/105 (57.14%), Postives = 78/105 (74.29%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            S+ W++HSTAEYA  +I   G ++PS   L KVAE+L +EFQ+TG NI QP F KAHRWG AFPA +I  ++KC+W ++ +LAICGDFC SP+VEGA+ SG   A
Sbjct:  265 SQSWVLHSTAEYASKVINNIGPRKPSADALAKVAEELLKEFQATGLNIPQPIFMKAHRWGSAFPAIAISGDDKCVWDKSMKLAICGDFCTSPSVEGAVLSGMRGA 369          
BLAST of GT626716 vs. TrEMBL
Match: Q10CG0_ORYSJ (Amine oxidase, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g57070 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.434e-30
Identity = 60/105 (57.14%), Postives = 78/105 (74.29%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            S+ W++HSTAEYA  +I   G ++PS   L KVAE+L +EFQ+TG NI QP F KAHRWG AFPA +I  ++KC+W ++ +LAICGDFC SP+VEGA+ SG   A
Sbjct:  138 SQSWVLHSTAEYASKVINNIGPRKPSADALAKVAEELLKEFQATGLNIPQPIFMKAHRWGSAFPAIAISGDDKCVWDKSMKLAICGDFCTSPSVEGAVLSGMRGA 242          
BLAST of GT626716 vs. TAIR peptide
Match: AT1G56000.1 (| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr1:20944149-20946101 FORWARD LENGTH=384)

HSP 1 Score: 154.066 bits (388), Expect = 5.325e-38
Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRWGGAFPAASIVQEEKCLWYRNKRLAICGDFCVSPNVEGAIDSGFAAA 322
            SERWI+HST +YA ++IA+TGL++ S  TLNK++E++F+EFQ +G   S PFF KAHRWG AFPA SI  EE+CLW RN+ LAICGDFCVSPNVEGAI SG AAA
Sbjct:  270 SERWILHSTPDYANSVIAKTGLQKLSSETLNKISEEMFKEFQCSGLVSSLPFFMKAHRWGSAFPAKSIAVEERCLWDRNRNLAICGDFCVSPNVEGAILSGLAAA 374          
BLAST of GT626716 vs. TAIR peptide
Match: AT1G55980.1 (| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr1:20938899-20941813 REVERSE LENGTH=466)

HSP 1 Score: 81.6481 bits (200), Expect = 3.359e-16
Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 2
Query:    8 SERWIIHSTAEYAENIIAQTGLKRPSDATLNKVAEDLFQEFQSTGANISQPFFKKAHRW 184
            SERWI+HST +YA ++IA+TGL++ S  TLNK++E++F+EFQ +G   S PFF KAHRW
Sbjct:  408 SERWILHSTPDYANSVIAKTGLQKLSSETLNKISEEMFKEFQCSGLVSSLPFFMKAHRW 466          
The following BLAST results are available for this feature:
BLAST of GT626716 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9NAB4_POPTR7.292e-4176.92Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SWZ7_VITVI4.727e-4073.33Whole genome shotgun sequence of line PN40024, sca... [more]
A5B645_VITVI1.053e-3972.38Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9SGS8_ARATH7.063e-3667.62T6H22.20 protein OS=Arabidopsis thaliana GN=T6H22.... [more]
Q8VYV2_ARATH7.063e-3667.62AT1G56000 protein OS=Arabidopsis thaliana GN=AT1G5... [more]
D7KN58_ARALY2.055e-3567.31Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7KN42_ARALY3.505e-3566.67Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
B8LM51_PICSI1.247e-3260.95Putative uncharacterized protein OS=Picea sitchens... [more]
Q10CG2_ORYSJ4.434e-3057.14Amine oxidase, putative, expressed OS=Oryza sativa... [more]
Q10CG0_ORYSJ4.434e-3057.14Amine oxidase, putative, expressed OS=Oryza sativa... [more]
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BLAST of GT626716 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G56000.15.325e-3867.62| Symbols: | FAD/NAD(P)-binding oxidoreductase fa... [more]
AT1G55980.13.359e-1659.32| Symbols: | FAD/NAD(P)-binding oxidoreductase fa... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.50.60no descriptioncoord: 61..111
score: 1.1
NoneNo IPR availableGENE3D3.90.660.10no descriptioncoord: 3..60
score: 1.3

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT626716 ID=GT626716; Name=GT626716; organism=Lens culinaris; type=EST; length=596bp
CGTTTACAGCGAAAGATGGATTATTCATTCAACAGCAGAGTATGCAGAGA
ATATAATCGCTCAAACAGGACTCAAGAGACCCTCGGACGCTACATTGAAT
AAAGTGGCGGAAGATCTTTTCCAAGAATTTCAAAGTACTGGGGCTAACAT
ATCACAACCCTTTTTCAAGAAAGCCCATAGATGGGGGGGTGCATTTCCGG
CTGCTAGTATTGTGCAAGAGGAAAAATGTCTTTGGTACAGAAACAAGAGG
CTAGCGATATGTGGTGATTTCTGTGTTAGTCCCAATGTTGAAGGCGCCAT
TGATAGTGGTTTCGCAGCAGCCTTAAGACTTAAAGATATTAGTGTCAGCT
CTCTATAGTTGTTGAAAGATTGAAGCTATGCAACATGAACATTTATAGTT
CTCCAAACTTGAGTGTGTTTTTATTCAGGCTTAATTTTTCTGCGAAAACT
TGTTTAATATTTCTTCAGGACATGGCTGTGTATTTATGTTACTAAGAAAA
TAAGGTTAACGTATGTTATGTAGAGAATGGCCATATCTACATAGCTGGGA
ATTTGTGATCATGCTATTCTTGAAAATGCAAGTTAAGCAATGACAG
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